BLASTX nr result

ID: Coptis25_contig00005189 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00005189
         (1321 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003535393.1| PREDICTED: probable lysine-specific demethyl...   104   2e-39
ref|XP_002266063.2| PREDICTED: probable lysine-specific demethyl...   104   6e-39
ref|XP_003555549.1| PREDICTED: probable lysine-specific demethyl...   103   6e-39
emb|CBI22382.3| unnamed protein product [Vitis vinifera]              104   6e-39
ref|XP_002319654.1| jumonji domain protein [Populus trichocarpa]...   103   2e-38

>ref|XP_003535393.1| PREDICTED: probable lysine-specific demethylase JMJ14-like [Glycine
           max]
          Length = 1257

 Score =  104 bits (260), Expect(2) = 2e-39
 Identities = 51/69 (73%), Positives = 59/69 (85%)
 Frame = -2

Query: 861 VPHDQNAIEIYCEQGRKTYVSHDKMLLGAAREAVRAQWEL*LQRKSTLDNLRWKDVYGKI 682
           +PH   AIE+Y EQGRKT +SHDK+LLGAAREAVRAQWEL L +K+TLDNLRWKDV GK 
Sbjct: 511 LPHGHIAIELYQEQGRKTSISHDKLLLGAAREAVRAQWELDLLKKNTLDNLRWKDVCGKD 570

Query: 681 GILANALKV 655
           G+LA ALK+
Sbjct: 571 GLLAKALKM 579



 Score = 85.5 bits (210), Expect(2) = 2e-39
 Identities = 37/45 (82%), Positives = 41/45 (91%)
 Frame = -1

Query: 1012 PSLLLSEGVPVYQCVQNPR*FVLTFPRGYHSGFNCGFNCAEAVNV 878
            PS+L S+GVPVY+C+QNP  FVLTFPR YHSGFNCGFNCAEAVNV
Sbjct: 461  PSILKSKGVPVYRCIQNPGDFVLTFPRAYHSGFNCGFNCAEAVNV 505


>ref|XP_002266063.2| PREDICTED: probable lysine-specific demethylase JMJ14-like [Vitis
           vinifera]
          Length = 1271

 Score =  104 bits (260), Expect(2) = 6e-39
 Identities = 51/68 (75%), Positives = 57/68 (83%)
 Frame = -2

Query: 861 VPHDQNAIEIYCEQGRKTYVSHDKMLLGAAREAVRAQWEL*LQRKSTLDNLRWKDVYGKI 682
           +PH QNAIE+Y EQGRKT +SHDK+LLGAAREAVRA WEL L +K+TLDNLRWK V GK 
Sbjct: 515 LPHGQNAIELYREQGRKTSISHDKLLLGAAREAVRANWELNLLKKNTLDNLRWKQVCGKD 574

Query: 681 GILANALK 658
           GILA  LK
Sbjct: 575 GILAKTLK 582



 Score = 84.0 bits (206), Expect(2) = 6e-39
 Identities = 37/45 (82%), Positives = 40/45 (88%)
 Frame = -1

Query: 1012 PSLLLSEGVPVYQCVQNPR*FVLTFPRGYHSGFNCGFNCAEAVNV 878
            PS++  EGVPVY+CVQNP  FVLTFPR YHSGFNCGFNCAEAVNV
Sbjct: 465  PSIVKFEGVPVYRCVQNPGEFVLTFPRAYHSGFNCGFNCAEAVNV 509


>ref|XP_003555549.1| PREDICTED: probable lysine-specific demethylase JMJ14-like [Glycine
           max]
          Length = 1257

 Score =  103 bits (256), Expect(2) = 6e-39
 Identities = 50/69 (72%), Positives = 59/69 (85%)
 Frame = -2

Query: 861 VPHDQNAIEIYCEQGRKTYVSHDKMLLGAAREAVRAQWEL*LQRKSTLDNLRWKDVYGKI 682
           +PH   AIE+Y EQGRKT +SHDK+LLGAAREAV+AQWEL L +K+TLDNLRWKDV GK 
Sbjct: 511 LPHGHIAIELYQEQGRKTSISHDKLLLGAAREAVQAQWELDLLKKNTLDNLRWKDVCGKD 570

Query: 681 GILANALKV 655
           G+LA ALK+
Sbjct: 571 GLLAKALKM 579



 Score = 85.5 bits (210), Expect(2) = 6e-39
 Identities = 37/45 (82%), Positives = 41/45 (91%)
 Frame = -1

Query: 1012 PSLLLSEGVPVYQCVQNPR*FVLTFPRGYHSGFNCGFNCAEAVNV 878
            PS+L S+GVPVY+C+QNP  FVLTFPR YHSGFNCGFNCAEAVNV
Sbjct: 461  PSILKSKGVPVYRCIQNPGDFVLTFPRAYHSGFNCGFNCAEAVNV 505


>emb|CBI22382.3| unnamed protein product [Vitis vinifera]
          Length = 1178

 Score =  104 bits (260), Expect(2) = 6e-39
 Identities = 51/68 (75%), Positives = 57/68 (83%)
 Frame = -2

Query: 861 VPHDQNAIEIYCEQGRKTYVSHDKMLLGAAREAVRAQWEL*LQRKSTLDNLRWKDVYGKI 682
           +PH QNAIE+Y EQGRKT +SHDK+LLGAAREAVRA WEL L +K+TLDNLRWK V GK 
Sbjct: 476 LPHGQNAIELYREQGRKTSISHDKLLLGAAREAVRANWELNLLKKNTLDNLRWKQVCGKD 535

Query: 681 GILANALK 658
           GILA  LK
Sbjct: 536 GILAKTLK 543



 Score = 84.0 bits (206), Expect(2) = 6e-39
 Identities = 37/45 (82%), Positives = 40/45 (88%)
 Frame = -1

Query: 1012 PSLLLSEGVPVYQCVQNPR*FVLTFPRGYHSGFNCGFNCAEAVNV 878
            PS++  EGVPVY+CVQNP  FVLTFPR YHSGFNCGFNCAEAVNV
Sbjct: 426  PSIVKFEGVPVYRCVQNPGEFVLTFPRAYHSGFNCGFNCAEAVNV 470


>ref|XP_002319654.1| jumonji domain protein [Populus trichocarpa]
           gi|222858030|gb|EEE95577.1| jumonji domain protein
           [Populus trichocarpa]
          Length = 923

 Score =  103 bits (258), Expect(2) = 2e-38
 Identities = 49/68 (72%), Positives = 57/68 (83%)
 Frame = -2

Query: 861 VPHDQNAIEIYCEQGRKTYVSHDKMLLGAAREAVRAQWEL*LQRKSTLDNLRWKDVYGKI 682
           +PH Q AIE+YCEQ R+T +SHDK+LLGAAREAVRA WEL L +++TLDNLRWKDV GK 
Sbjct: 388 LPHGQTAIELYCEQRRRTSISHDKLLLGAAREAVRAHWELNLLKRNTLDNLRWKDVCGKN 447

Query: 681 GILANALK 658
           GILA A K
Sbjct: 448 GILAKAFK 455



 Score = 83.2 bits (204), Expect(2) = 2e-38
 Identities = 37/45 (82%), Positives = 40/45 (88%)
 Frame = -1

Query: 1012 PSLLLSEGVPVYQCVQNPR*FVLTFPRGYHSGFNCGFNCAEAVNV 878
            P++L SEGVPVY+CVQN   FVLTFPR YHSGFNCGFNCAEAVNV
Sbjct: 338  PNILRSEGVPVYRCVQNSGEFVLTFPRAYHSGFNCGFNCAEAVNV 382


Top