BLASTX nr result

ID: Coptis25_contig00005178 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00005178
         (210 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001236701.1| uncharacterized protein LOC100306301 [Glycin...   129   2e-28
ref|NP_001236071.1| uncharacterized protein LOC100499789 [Glycin...   129   2e-28
ref|XP_002301485.1| predicted protein [Populus trichocarpa] gi|2...   128   4e-28
ref|XP_002523106.1| 60S ribosomal protein L18, putative [Ricinus...   128   5e-28
ref|XP_002330176.1| predicted protein [Populus trichocarpa] gi|1...   127   7e-28

>ref|NP_001236701.1| uncharacterized protein LOC100306301 [Glycine max]
           gi|255628147|gb|ACU14418.1| unknown [Glycine max]
          Length = 187

 Score =  129 bits (324), Expect = 2e-28
 Identities = 65/70 (92%), Positives = 68/70 (97%)
 Frame = +1

Query: 1   IRFMKGKEEKIAVVVGAVTDDTRVYEVPALKVTALRFTETARARIEKAGGECLTFDQLAL 180
           IR+ KGKE+KIAVVVGAVTDD RVYEVPALKVTALRFTETARARIEKAGGECLTFDQLAL
Sbjct: 68  IRYTKGKEDKIAVVVGAVTDDIRVYEVPALKVTALRFTETARARIEKAGGECLTFDQLAL 127

Query: 181 KAPLGQNTVL 210
           +APLGQNTVL
Sbjct: 128 RAPLGQNTVL 137


>ref|NP_001236071.1| uncharacterized protein LOC100499789 [Glycine max]
           gi|255626631|gb|ACU13660.1| unknown [Glycine max]
          Length = 187

 Score =  129 bits (324), Expect = 2e-28
 Identities = 65/70 (92%), Positives = 68/70 (97%)
 Frame = +1

Query: 1   IRFMKGKEEKIAVVVGAVTDDTRVYEVPALKVTALRFTETARARIEKAGGECLTFDQLAL 180
           IR+ KGKE+KIAVVVGAVTDD RVYEVPALKVTALRFTETARARIEKAGGECLTFDQLAL
Sbjct: 68  IRYAKGKEDKIAVVVGAVTDDIRVYEVPALKVTALRFTETARARIEKAGGECLTFDQLAL 127

Query: 181 KAPLGQNTVL 210
           +APLGQNTVL
Sbjct: 128 RAPLGQNTVL 137


>ref|XP_002301485.1| predicted protein [Populus trichocarpa] gi|222843211|gb|EEE80758.1|
           predicted protein [Populus trichocarpa]
          Length = 187

 Score =  128 bits (322), Expect = 4e-28
 Identities = 64/70 (91%), Positives = 67/70 (95%)
 Frame = +1

Query: 1   IRFMKGKEEKIAVVVGAVTDDTRVYEVPALKVTALRFTETARARIEKAGGECLTFDQLAL 180
           I FMKGKE+KIAVVVG +TDD RVYEVPALKVTALRFTETARARIEKAGGECLTFDQLAL
Sbjct: 68  ITFMKGKEDKIAVVVGTITDDIRVYEVPALKVTALRFTETARARIEKAGGECLTFDQLAL 127

Query: 181 KAPLGQNTVL 210
           +APLGQNTVL
Sbjct: 128 RAPLGQNTVL 137


>ref|XP_002523106.1| 60S ribosomal protein L18, putative [Ricinus communis]
           gi|223537668|gb|EEF39291.1| 60S ribosomal protein L18,
           putative [Ricinus communis]
          Length = 187

 Score =  128 bits (321), Expect = 5e-28
 Identities = 64/70 (91%), Positives = 66/70 (94%)
 Frame = +1

Query: 1   IRFMKGKEEKIAVVVGAVTDDTRVYEVPALKVTALRFTETARARIEKAGGECLTFDQLAL 180
           I FMKGKE KIAV+VG VTDD RVYEVPALKVTALRFTETARARIEKAGGECLTFDQLAL
Sbjct: 68  ITFMKGKENKIAVIVGTVTDDVRVYEVPALKVTALRFTETARARIEKAGGECLTFDQLAL 127

Query: 181 KAPLGQNTVL 210
           +APLGQNTVL
Sbjct: 128 RAPLGQNTVL 137


>ref|XP_002330176.1| predicted protein [Populus trichocarpa] gi|118482972|gb|ABK93398.1|
           unknown [Populus trichocarpa]
           gi|118483781|gb|ABK93783.1| unknown [Populus
           trichocarpa] gi|222871632|gb|EEF08763.1| predicted
           protein [Populus trichocarpa]
          Length = 187

 Score =  127 bits (320), Expect = 7e-28
 Identities = 64/70 (91%), Positives = 67/70 (95%)
 Frame = +1

Query: 1   IRFMKGKEEKIAVVVGAVTDDTRVYEVPALKVTALRFTETARARIEKAGGECLTFDQLAL 180
           I FMKGKE+KIAV+VG VTDD RVYEVPALKVTALRFTETARARIEKAGGECLTFDQLAL
Sbjct: 68  ITFMKGKEDKIAVLVGTVTDDIRVYEVPALKVTALRFTETARARIEKAGGECLTFDQLAL 127

Query: 181 KAPLGQNTVL 210
           +APLGQNTVL
Sbjct: 128 RAPLGQNTVL 137


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