BLASTX nr result

ID: Coptis25_contig00005168 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00005168
         (949 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282455.1| PREDICTED: putative cyclic nucleotide-gated ...   383   e-104
emb|CAN61379.1| hypothetical protein VITISV_037545 [Vitis vinifera]   380   e-103
ref|XP_002314283.1| predicted protein [Populus trichocarpa] gi|2...   380   e-103
ref|XP_002529932.1| Cyclic nucleotide-gated ion channel, putativ...   379   e-103
ref|XP_004145808.1| PREDICTED: putative cyclic nucleotide-gated ...   364   2e-98

>ref|XP_002282455.1| PREDICTED: putative cyclic nucleotide-gated ion channel 15-like
            [Vitis vinifera]
          Length = 713

 Score =  383 bits (983), Expect = e-104
 Identities = 192/266 (72%), Positives = 216/266 (81%), Gaps = 5/266 (1%)
 Frame = -2

Query: 948  YKWVATRGVDEEAXXXXXXXXXXXXXXRHLCLDLVRRVPLFDQMDERMLDAICERLKPAL 769
            YKWVATRGVDEEA              RHLC DLVRRVPLFDQMDERMLDAICERLKPAL
Sbjct: 444  YKWVATRGVDEEALLKGLPMDLRRDIKRHLCFDLVRRVPLFDQMDERMLDAICERLKPAL 503

Query: 768  CTQGTCLVREGDPVNEMLFIIRGHLNSHTTNGGRTGFFNLSLIGPGDFCGEELLTWALDP 589
             T+GT LVREGDPVNEMLF+IRG+L+S+TTNGGRTGFFN   IGPGDFCGEELLTWAL+P
Sbjct: 504  STEGTFLVREGDPVNEMLFVIRGNLDSYTTNGGRTGFFNSCRIGPGDFCGEELLTWALEP 563

Query: 588  RPNAVLPSSTRTVEAIGEVEAFALIAEDMKFVASQFRRLHSKQLRHKFRFYSHQWRSWAA 409
            RP+ +LPSSTRTV++I EVEAFALIAED+KFVASQFRRLHSKQLRHKFRFYS  WR+WAA
Sbjct: 564  RPSIILPSSTRTVKSISEVEAFALIAEDLKFVASQFRRLHSKQLRHKFRFYSPHWRTWAA 623

Query: 408  CFLQAAWRRYKRMKDAALLKIKENPISNSVEPT-----SIGPPQGTGIAVYATRLAASTR 244
            CF+QAAWRR+KR K+AA LK +E+P++   +P+      + P  G+G+AVYA RLAAS R
Sbjct: 624  CFIQAAWRRFKRRKEAAELKAREHPVAAEPQPSFDRFDVVMPAPGSGLAVYAARLAASAR 683

Query: 243  MGLCKSYGSKVSVVSPLQKPDEPDFS 166
             G  K  GS  SVVS LQKP EPDFS
Sbjct: 684  RGPLKHSGSDSSVVSSLQKPAEPDFS 709


>emb|CAN61379.1| hypothetical protein VITISV_037545 [Vitis vinifera]
          Length = 650

 Score =  380 bits (977), Expect = e-103
 Identities = 191/266 (71%), Positives = 215/266 (80%), Gaps = 5/266 (1%)
 Frame = -2

Query: 948  YKWVATRGVDEEAXXXXXXXXXXXXXXRHLCLDLVRRVPLFDQMDERMLDAICERLKPAL 769
            YKWVATRGVDEEA              RHLC DLVRRVPLFDQMD RMLDAICERLKPAL
Sbjct: 381  YKWVATRGVDEEALLKGLPMDLRRDIKRHLCFDLVRRVPLFDQMDXRMLDAICERLKPAL 440

Query: 768  CTQGTCLVREGDPVNEMLFIIRGHLNSHTTNGGRTGFFNLSLIGPGDFCGEELLTWALDP 589
             T+GT LVREGDPVNEMLF+IRG+L+S+TTNGGRTGFFN   IGPGDFCGEELLTWAL+P
Sbjct: 441  STEGTFLVREGDPVNEMLFVIRGNLDSYTTNGGRTGFFNSCRIGPGDFCGEELLTWALEP 500

Query: 588  RPNAVLPSSTRTVEAIGEVEAFALIAEDMKFVASQFRRLHSKQLRHKFRFYSHQWRSWAA 409
            RP+ +LPSSTRTV++I EVEAFALIAED+KFVASQFRRLHSKQLRHKFRFYS  WR+WAA
Sbjct: 501  RPSIILPSSTRTVKSISEVEAFALIAEDLKFVASQFRRLHSKQLRHKFRFYSPHWRTWAA 560

Query: 408  CFLQAAWRRYKRMKDAALLKIKENPISNSVEPT-----SIGPPQGTGIAVYATRLAASTR 244
            CF+QAAWRR+KR K+AA LK +E+P++   +P+      + P  G+G+AVYA RLAAS R
Sbjct: 561  CFIQAAWRRFKRRKEAAELKAREHPVAAEPQPSFDRFDVVMPAPGSGLAVYAARLAASAR 620

Query: 243  MGLCKSYGSKVSVVSPLQKPDEPDFS 166
             G  K  GS  SVVS LQKP EPDFS
Sbjct: 621  RGPLKHSGSDSSVVSSLQKPAEPDFS 646


>ref|XP_002314283.1| predicted protein [Populus trichocarpa] gi|222850691|gb|EEE88238.1|
            predicted protein [Populus trichocarpa]
          Length = 745

 Score =  380 bits (975), Expect = e-103
 Identities = 190/261 (72%), Positives = 213/261 (81%)
 Frame = -2

Query: 948  YKWVATRGVDEEAXXXXXXXXXXXXXXRHLCLDLVRRVPLFDQMDERMLDAICERLKPAL 769
            YKWVATRGVDEEA              RHLCLDLVRRVPLFDQMDERMLDAICERL+PAL
Sbjct: 485  YKWVATRGVDEEAVLKGLPMELRRDIKRHLCLDLVRRVPLFDQMDERMLDAICERLQPAL 544

Query: 768  CTQGTCLVREGDPVNEMLFIIRGHLNSHTTNGGRTGFFNLSLIGPGDFCGEELLTWALDP 589
            CT+GT LVREGDPVNEMLFIIRG+L+S+TTNGGRTGFFN   +GPGDFCGEELLTWALDP
Sbjct: 545  CTEGTFLVREGDPVNEMLFIIRGNLDSYTTNGGRTGFFNSCRLGPGDFCGEELLTWALDP 604

Query: 588  RPNAVLPSSTRTVEAIGEVEAFALIAEDMKFVASQFRRLHSKQLRHKFRFYSHQWRSWAA 409
            RP+ +LPSSTRTV+AI EVEAFAL AED+KFVASQFRRLHSKQLR KFRFYSH WR+WAA
Sbjct: 605  RPSIILPSSTRTVKAILEVEAFALSAEDLKFVASQFRRLHSKQLRQKFRFYSHHWRTWAA 664

Query: 408  CFLQAAWRRYKRMKDAALLKIKENPISNSVEPTSIGPPQGTGIAVYATRLAASTRMGLCK 229
            CF+QAAWRRYK+ K+A  L+ +ENP   + +P    P  G+ +++YA RL AS R G+ K
Sbjct: 665  CFIQAAWRRYKKRKEATDLRARENP--TAADPALTSP--GSSLSMYAARLKASARRGVLK 720

Query: 228  SYGSKVSVVSPLQKPDEPDFS 166
              GS  SVVS LQKPDEPDFS
Sbjct: 721  RSGSDSSVVSSLQKPDEPDFS 741


>ref|XP_002529932.1| Cyclic nucleotide-gated ion channel, putative [Ricinus communis]
            gi|223530562|gb|EEF32440.1| Cyclic nucleotide-gated ion
            channel, putative [Ricinus communis]
          Length = 518

 Score =  379 bits (973), Expect = e-103
 Identities = 193/261 (73%), Positives = 210/261 (80%)
 Frame = -2

Query: 948  YKWVATRGVDEEAXXXXXXXXXXXXXXRHLCLDLVRRVPLFDQMDERMLDAICERLKPAL 769
            YKWVATRGVDEEA              RHLCLDLVRRVPLFDQMDERMLDAICERLKPAL
Sbjct: 258  YKWVATRGVDEEALLKGLPLDLRRDIKRHLCLDLVRRVPLFDQMDERMLDAICERLKPAL 317

Query: 768  CTQGTCLVREGDPVNEMLFIIRGHLNSHTTNGGRTGFFNLSLIGPGDFCGEELLTWALDP 589
             T+GT LVREGD VNEMLFIIRG+L+S+TTNGGRTGFFN   IGPGDFCGEELLTWALDP
Sbjct: 318  STEGTFLVREGDLVNEMLFIIRGNLDSYTTNGGRTGFFNSCRIGPGDFCGEELLTWALDP 377

Query: 588  RPNAVLPSSTRTVEAIGEVEAFALIAEDMKFVASQFRRLHSKQLRHKFRFYSHQWRSWAA 409
            RP+ +LPSSTRTV+AI EVEAFAL AED+KFVASQFRRLHSKQLR KFRFYSHQWR+WAA
Sbjct: 378  RPSVILPSSTRTVKAISEVEAFALEAEDLKFVASQFRRLHSKQLRQKFRFYSHQWRTWAA 437

Query: 408  CFLQAAWRRYKRMKDAALLKIKENPISNSVEPTSIGPPQGTGIAVYATRLAASTRMGLCK 229
            CF+QAAWRRYK+ K+AA L+ KENP     EP    P   +G+A+ A RLAASTR G+ K
Sbjct: 438  CFIQAAWRRYKKRKEAAELRAKENPAEAEPEP----PSASSGLAMCAARLAASTRRGIMK 493

Query: 228  SYGSKVSVVSPLQKPDEPDFS 166
               S  SVV  LQKP EPDFS
Sbjct: 494  HSASDSSVVRSLQKPAEPDFS 514


>ref|XP_004145808.1| PREDICTED: putative cyclic nucleotide-gated ion channel 15-like
            [Cucumis sativus] gi|449516804|ref|XP_004165436.1|
            PREDICTED: putative cyclic nucleotide-gated ion channel
            15-like [Cucumis sativus]
          Length = 720

 Score =  364 bits (934), Expect = 2e-98
 Identities = 186/261 (71%), Positives = 206/261 (78%)
 Frame = -2

Query: 948  YKWVATRGVDEEAXXXXXXXXXXXXXXRHLCLDLVRRVPLFDQMDERMLDAICERLKPAL 769
            YKWVATRGVDEE               RHLCLDLVRRVPLFDQMDERMLDAICERLKPAL
Sbjct: 461  YKWVATRGVDEEVLLRSLPLDLRRDIKRHLCLDLVRRVPLFDQMDERMLDAICERLKPAL 520

Query: 768  CTQGTCLVREGDPVNEMLFIIRGHLNSHTTNGGRTGFFNLSLIGPGDFCGEELLTWALDP 589
             T+GT LVREGDPVNEMLFIIRGHL+S+TTNGGRTGFFN   IGPGDFCGEELLTWALDP
Sbjct: 521  STEGTFLVREGDPVNEMLFIIRGHLDSYTTNGGRTGFFNSCRIGPGDFCGEELLTWALDP 580

Query: 588  RPNAVLPSSTRTVEAIGEVEAFALIAEDMKFVASQFRRLHSKQLRHKFRFYSHQWRSWAA 409
            RP+ VLPSSTRTV+AI EVEAFALIAED+KFV+SQFRRLHSKQLRHKFRFYSHQWR+WAA
Sbjct: 581  RPSVVLPSSTRTVKAISEVEAFALIAEDLKFVSSQFRRLHSKQLRHKFRFYSHQWRTWAA 640

Query: 408  CFLQAAWRRYKRMKDAALLKIKENPISNSVEPTSIGPPQGTGIAVYATRLAASTRMGLCK 229
            CF+QAAWRRYKR K+ A L+ KE+  +  VE + + PP  + +       + + R  L K
Sbjct: 641  CFVQAAWRRYKRRKERAELRAKESYPTTKVE-SPLSPPTTSNL----DSRSGNARRALNK 695

Query: 228  SYGSKVSVVSPLQKPDEPDFS 166
               S   VVS LQKP+EPDFS
Sbjct: 696  RCVSDAGVVSSLQKPEEPDFS 716


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