BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00005158
         (1332 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283737.1| PREDICTED: COMM domain-containing protein 9 ...   115   3e-59
ref|XP_002318724.1| predicted protein [Populus trichocarpa] gi|2...    95   2e-50
gb|ABK26322.1| unknown [Picea sitchensis]                              89   1e-48
ref|XP_003602101.1| FAR1-related protein [Medicago truncatula] g...    83   3e-42
ref|XP_002511192.1| COMM domain-containing protein, putative [Ri...   174   6e-41

>ref|XP_002283737.1| PREDICTED: COMM domain-containing protein 9 [Vitis vinifera]
           gi|297734414|emb|CBI15661.3| unnamed protein product
           [Vitis vinifera]
          Length = 200

 Score =  115 bits (288), Expect(3) = 3e-59
 Identities = 56/87 (64%), Positives = 68/87 (78%)
 Frame = +2

Query: 479 QVTIPRLKTMTWNLANQETELTQPLAIINFKLHDDAQPNAGETEVKIQFDKDDLETMVKS 658
           QV +PRLK MTWN+ANQETE+  P+A+IN KL +DAQ ++GE EVK Q DKD LETM+KS
Sbjct: 115 QVIMPRLKAMTWNMANQETEMLDPVAVINLKLQNDAQSHSGELEVKFQLDKDTLETMLKS 174

Query: 659 MYCIRDQFSDMDETSNGSCQPQEATTL 739
           MY IRDQ SD+ ETSNG   P+E  T+
Sbjct: 175 MYSIRDQLSDVGETSNGHL-PEETNTV 200



 Score = 97.4 bits (241), Expect(3) = 3e-59
 Identities = 46/66 (69%), Positives = 53/66 (80%)
 Frame = +2

Query: 2   DHSLWGHLPLLVRSTSKESVEYILQTLWRTRKTGLDATDRDTLRGLLQLPNDSDLDPVTH 181
           +H++WGHLPLLV S SKESVEYILQ LWRTRKTGLDATDR  +  +LQLPN SDLDP+  
Sbjct: 2   EHTVWGHLPLLVNSNSKESVEYILQALWRTRKTGLDATDRHFISEMLQLPNHSDLDPLLV 61

Query: 182 FLHCLL 199
            L  L+
Sbjct: 62  CLRMLM 67



 Score = 65.1 bits (157), Expect(3) = 3e-59
 Identities = 35/60 (58%), Positives = 41/60 (68%), Gaps = 2/60 (3%)
 Frame = +3

Query: 243 LLVCLRVLIRKCVCVNNNNKDEIQKLFPQEVSPEXXXXXXXXXXKFQKEWRDD--KDQVL 416
           LLVCLR+L+RKCV   N +KDEIQKLFP EV PE          KFQ+EWR+D   DQV+
Sbjct: 59  LLVCLRMLMRKCV-YENISKDEIQKLFPDEVLPELQRLLTLLLQKFQREWREDVLNDQVI 117


>ref|XP_002318724.1| predicted protein [Populus trichocarpa] gi|222859397|gb|EEE96944.1|
           predicted protein [Populus trichocarpa]
          Length = 198

 Score = 95.1 bits (235), Expect(3) = 2e-50
 Identities = 44/66 (66%), Positives = 53/66 (80%)
 Frame = +2

Query: 2   DHSLWGHLPLLVRSTSKESVEYILQTLWRTRKTGLDATDRDTLRGLLQLPNDSDLDPVTH 181
           +HSLW HLPLLVR+ SKESVEYILQ LWRTR+TGLD+ DR  +  +LQLPND+DLDP+  
Sbjct: 2   EHSLWNHLPLLVRANSKESVEYILQALWRTRQTGLDSADRLVISDILQLPNDTDLDPLLV 61

Query: 182 FLHCLL 199
            L  L+
Sbjct: 62  CLRMLI 67



 Score = 90.1 bits (222), Expect(3) = 2e-50
 Identities = 47/77 (61%), Positives = 55/77 (71%), Gaps = 1/77 (1%)
 Frame = +2

Query: 479 QVTIPRLKTMTWNLANQET-ELTQPLAIINFKLHDDAQPNAGETEVKIQFDKDDLETMVK 655
           QV  PRLK MTWN+ANQ+  E T P+A+IN KL DD Q ++   EVK Q  KD LETMVK
Sbjct: 115 QVDFPRLKAMTWNMANQDAAEGTDPVAVINLKLQDDTQSHS---EVKFQLGKDTLETMVK 171

Query: 656 SMYCIRDQFSDMDETSN 706
           SMYCIRDQ SD+   S+
Sbjct: 172 SMYCIRDQLSDLGGASS 188



 Score = 63.2 bits (152), Expect(3) = 2e-50
 Identities = 35/59 (59%), Positives = 40/59 (67%), Gaps = 2/59 (3%)
 Frame = +3

Query: 243 LLVCLRVLIRKCVCVNNNNKDEIQKLFPQEVSPEXXXXXXXXXXKFQKEWRDD--KDQV 413
           LLVCLR+LIR+CV   N +KD+IQKLFP+EV PE          KFQ EWR D  KDQV
Sbjct: 59  LLVCLRMLIRRCV-YENVSKDDIQKLFPEEVLPELQRLLTLLLQKFQTEWRADVFKDQV 116


>gb|ABK26322.1| unknown [Picea sitchensis]
          Length = 199

 Score = 89.4 bits (220), Expect(3) = 1e-48
 Identities = 41/66 (62%), Positives = 54/66 (81%)
 Frame = +2

Query: 2   DHSLWGHLPLLVRSTSKESVEYILQTLWRTRKTGLDATDRDTLRGLLQLPNDSDLDPVTH 181
           DH+LW HLP+LVR+ SKESVE+ILQ+LWRTRKTGLDA ++  ++ LLQLP ++DLDP+  
Sbjct: 2   DHALWDHLPVLVRAKSKESVEHILQSLWRTRKTGLDAPEKAYIQDLLQLPTENDLDPLLV 61

Query: 182 FLHCLL 199
            L  L+
Sbjct: 62  CLRILI 67



 Score = 83.6 bits (205), Expect(3) = 1e-48
 Identities = 38/77 (49%), Positives = 54/77 (70%)
 Frame = +2

Query: 479 QVTIPRLKTMTWNLANQETELTQPLAIINFKLHDDAQPNAGETEVKIQFDKDDLETMVKS 658
           QV++PRLK MTW++ NQ T     +A+IN +L +  Q ++GET+VK Q  KD LE M++S
Sbjct: 115 QVSLPRLKAMTWSMENQSTTPANRMAVINLRLQETTQSSSGETDVKFQITKDTLEAMLRS 174

Query: 659 MYCIRDQFSDMDETSNG 709
           MY IRDQ S++   S+G
Sbjct: 175 MYYIRDQLSNVGAASSG 191



 Score = 69.3 bits (168), Expect(3) = 1e-48
 Identities = 37/59 (62%), Positives = 41/59 (69%), Gaps = 2/59 (3%)
 Frame = +3

Query: 243 LLVCLRVLIRKCVCVNNNNKDEIQKLFPQEVSPEXXXXXXXXXXKFQKEWRDD--KDQV 413
           LLVCLR+LIR+CV   N NKDEIQKLFP EV PE          KFQ+EWR+D  KDQV
Sbjct: 59  LLVCLRILIRRCV-YENFNKDEIQKLFPSEVPPELQRLLVILLMKFQREWREDAVKDQV 116


>ref|XP_003602101.1| FAR1-related protein [Medicago truncatula]
           gi|355491149|gb|AES72352.1| FAR1-related protein
           [Medicago truncatula]
          Length = 193

 Score = 83.2 bits (204), Expect(3) = 3e-42
 Identities = 40/79 (50%), Positives = 57/79 (72%), Gaps = 1/79 (1%)
 Frame = +2

Query: 479 QVTIPRLKTMTWNLANQETELTQPLAIINFKLHDDAQPNAGETEVKIQFDKDDLETMVKS 658
           Q  +PRLK MTWN+A+Q+TEL+ P A+IN KL +DA+ ++GE ++K Q   D +E M+K 
Sbjct: 115 QNIVPRLKAMTWNMADQDTELSDPTAVINLKLQNDARFHSGELDLKFQLATDSVEMMLKE 174

Query: 659 MYCIRDQFSDM-DETSNGS 712
           M+ +RDQFS M DE   G+
Sbjct: 175 MHNMRDQFSAMEDEAPKGN 193



 Score = 81.6 bits (200), Expect(3) = 3e-42
 Identities = 37/66 (56%), Positives = 50/66 (75%)
 Frame = +2

Query: 2   DHSLWGHLPLLVRSTSKESVEYILQTLWRTRKTGLDATDRDTLRGLLQLPNDSDLDPVTH 181
           + +LWGHLP+L+  +SKES+E+ILQ LWRTRKTGL + DR  ++ +LQL ND DLDP+  
Sbjct: 2   EQTLWGHLPVLLNVSSKESIEFILQALWRTRKTGLQSDDRCIIQDMLQLQNDYDLDPLLV 61

Query: 182 FLHCLL 199
            L  L+
Sbjct: 62  CLRMLI 67



 Score = 55.8 bits (133), Expect(3) = 3e-42
 Identities = 30/58 (51%), Positives = 37/58 (63%), Gaps = 2/58 (3%)
 Frame = +3

Query: 243 LLVCLRVLIRKCVCVNNNNKDEIQKLFPQEVSPEXXXXXXXXXXKFQKEWRDD--KDQ 410
           LLVCLR+LIR+CV   N  KD+  KLFP EV PE          KFQ++W++D  KDQ
Sbjct: 59  LLVCLRMLIRRCV-YENTCKDDYPKLFPSEVLPELQKLLTLLLQKFQQQWQEDVLKDQ 115


>ref|XP_002511192.1| COMM domain-containing protein, putative [Ricinus communis]
           gi|223550307|gb|EEF51794.1| COMM domain-containing
           protein, putative [Ricinus communis]
          Length = 201

 Score =  174 bits (440), Expect = 6e-41
 Identities = 109/246 (44%), Positives = 136/246 (55%), Gaps = 2/246 (0%)
 Frame = +2

Query: 2   DHSLWGHLPLLVRSTSKESVEYILQTLWRTRKTGLDATDRDTLRGLLQLPNDSDLDPVTH 181
           +H+ WGHLPLLVR+ SKESVEYILQ LWRTRKTGLDA DR  +  +LQL NDSDLDP+  
Sbjct: 2   EHTFWGHLPLLVRANSKESVEYILQALWRTRKTGLDAADRHVVSEMLQLQNDSDLDPL-- 59

Query: 182 FLHCLLL*IV-IIYKRVFCYAAFGMSSRVDPQVCLC****QG*DSETVPSRGLTRIAKIT 358
            L CL + I   +Y+ +         S+ + Q             +  PS  L  + ++ 
Sbjct: 60  -LVCLRMLIRRCVYENI---------SKDEIQ-------------KLFPSEVLPELQRLL 96

Query: 359 YSFTAKVSKRMER**GPGFTNFIYLSH*NSCTSQI*V*YFQVTIPRLKTMTWNLANQET- 535
                K  K  +                        V   QVT PRLK MTWN+ANQ+T 
Sbjct: 97  TILLQKFQKEWQED----------------------VFKDQVTFPRLKAMTWNMANQDTA 134

Query: 536 ELTQPLAIINFKLHDDAQPNAGETEVKIQFDKDDLETMVKSMYCIRDQFSDMDETSNGSC 715
           E+T+P+A+IN KL +DA   +GE EVK Q  KD LETMVKSMYCIRDQ SD+D  S G  
Sbjct: 135 EMTEPMAVINLKLQNDAPSQSGELEVKFQLAKDTLETMVKSMYCIRDQLSDIDGASKGQL 194

Query: 716 QPQEAT 733
             +  T
Sbjct: 195 SLESNT 200