BLASTX nr result

ID: Coptis25_contig00005157 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00005157
         (1065 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278312.1| PREDICTED: uncharacterized protein LOC100241...   343   4e-92
ref|XP_004144667.1| PREDICTED: rhodanese-like domain-containing ...   329   8e-88
ref|XP_002532336.1| conserved hypothetical protein [Ricinus comm...   321   2e-85
ref|XP_002331043.1| predicted protein [Populus trichocarpa] gi|2...   321   2e-85
ref|XP_002879974.1| hypothetical protein ARALYDRAFT_483311 [Arab...   319   8e-85

>ref|XP_002278312.1| PREDICTED: uncharacterized protein LOC100241760 [Vitis vinifera]
           gi|297739859|emb|CBI30041.3| unnamed protein product
           [Vitis vinifera]
          Length = 234

 Score =  343 bits (880), Expect = 4e-92
 Identities = 175/232 (75%), Positives = 202/232 (87%), Gaps = 6/232 (2%)
 Frame = -2

Query: 962 MAGLGFCTPISCT---RTSWLVLESTR---MPYKPLRSRGVVIRAEVNFVNSQDAKELIA 801
           MAGL  C P+S     RTS L+LE+     M  K L  R + I+AEVNFVN+++ K+LIA
Sbjct: 1   MAGLCCCMPLSSRSNFRTSRLMLETRHGRTMVGKSLGRRNLQIKAEVNFVNAEEGKKLIA 60

Query: 800 VEGYAVLDVRDKSQYERAHIKSCHHIPLFIENNDNDLGTIIKRTVHNNFSGLFFGLPFTK 621
           VEGYA+LDVRDKSQY+RAHIKSC+H+PLFIEN DNDLGTIIKRTVHNNFSGLFFGLPFTK
Sbjct: 61  VEGYAILDVRDKSQYDRAHIKSCYHVPLFIENQDNDLGTIIKRTVHNNFSGLFFGLPFTK 120

Query: 620 INADFLKLVKSQFSQDSKLLLVCQEGLRSAAAANKLEEAGFENISCITSGLQSVKPGTFD 441
           +N DF++ VKSQFS +SKLLLVCQEGLRSAAAA+KLE+AGF NI+CITSGLQ+VKPG FD
Sbjct: 121 VNPDFVQSVKSQFSPESKLLLVCQEGLRSAAAASKLEQAGFANIACITSGLQTVKPGMFD 180

Query: 440 TVGSTELQNAGKAGLVTVQGKISAALGTVLICAYLFITFFPDQAEKILQMVP 285
           +VGSTELQ+AGKAGLVT+QGKISA LGTVLICA+LFITFFP+QAEK+LQM P
Sbjct: 181 SVGSTELQDAGKAGLVTIQGKISAVLGTVLICAFLFITFFPEQAEKLLQMAP 232


>ref|XP_004144667.1| PREDICTED: rhodanese-like domain-containing protein 9,
           chloroplastic-like [Cucumis sativus]
          Length = 246

 Score =  329 bits (843), Expect = 8e-88
 Identities = 165/234 (70%), Positives = 197/234 (84%), Gaps = 8/234 (3%)
 Frame = -2

Query: 962 MAGLGFCTPI----SCTRTSWLVLEST----RMPYKPLRSRGVVIRAEVNFVNSQDAKEL 807
           MAG+  C       S  RTSWL L +       P K +  R V I+AE+NFVN+++AK+L
Sbjct: 11  MAGIRPCCSTLPSRSNPRTSWLTLRTVPHRRTYPGKRVLQRKVGIKAEINFVNAEEAKKL 70

Query: 806 IAVEGYAVLDVRDKSQYERAHIKSCHHIPLFIENNDNDLGTIIKRTVHNNFSGLFFGLPF 627
           IAV+GY ++DVRDKSQ++RAHIKSC+H+PLFIEN DNDLGTIIKRTVHNNFSGLFFGLPF
Sbjct: 71  IAVDGYVIVDVRDKSQFDRAHIKSCYHVPLFIENQDNDLGTIIKRTVHNNFSGLFFGLPF 130

Query: 626 TKINADFLKLVKSQFSQDSKLLLVCQEGLRSAAAANKLEEAGFENISCITSGLQSVKPGT 447
           TK+N +F++ VK+Q S  SKLLLVCQEGLRS AAA+KLE+AGFENI+CITSGLQSVKPG+
Sbjct: 131 TKLNPEFVQSVKAQLSPQSKLLLVCQEGLRSTAAADKLEKAGFENIACITSGLQSVKPGS 190

Query: 446 FDTVGSTELQNAGKAGLVTVQGKISAALGTVLICAYLFITFFPDQAEKILQMVP 285
           FD+VGST+LQ+AGKAGLVT+QGKISA LGTVLICAYLF+T FP+QAEK+LQM P
Sbjct: 191 FDSVGSTQLQDAGKAGLVTIQGKISAVLGTVLICAYLFVTLFPEQAEKLLQMAP 244


>ref|XP_002532336.1| conserved hypothetical protein [Ricinus communis]
           gi|223527953|gb|EEF30038.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 235

 Score =  321 bits (823), Expect = 2e-85
 Identities = 163/235 (69%), Positives = 194/235 (82%), Gaps = 7/235 (2%)
 Frame = -2

Query: 962 MAGLGF-CTPISCT---RTSWLVLESTR---MPYKPLRSRGVVIRAEVNFVNSQDAKELI 804
           MAG+   C  +S     +T WL   + R   +P K   SR   IRAEVN+V+ ++AK+L+
Sbjct: 1   MAGIATSCLTVSSRSKFQTCWLEYGTHRARDIPRKLSNSREFGIRAEVNYVSGEEAKKLV 60

Query: 803 AVEGYAVLDVRDKSQYERAHIKSCHHIPLFIENNDNDLGTIIKRTVHNNFSGLFFGLPFT 624
           A EGY +LDVRD++QY+RAHIKSC+H+PLFIEN DNDLGTIIKRTVHNNFSGLFFGL FT
Sbjct: 61  AAEGYEILDVRDRTQYDRAHIKSCYHVPLFIENKDNDLGTIIKRTVHNNFSGLFFGLAFT 120

Query: 623 KINADFLKLVKSQFSQDSKLLLVCQEGLRSAAAANKLEEAGFENISCITSGLQSVKPGTF 444
           K N +F++ VK+QFS DSKLLLVCQEGLRS AAANKLE+AGF+N++CITSGLQSVKPGTF
Sbjct: 121 KPNPEFVESVKNQFSPDSKLLLVCQEGLRSTAAANKLEQAGFQNVACITSGLQSVKPGTF 180

Query: 443 DTVGSTELQNAGKAGLVTVQGKISAALGTVLICAYLFITFFPDQAEKILQMVPGN 279
           D+ GS+ELQNAGK GLVTVQGKISA LGTVLICAYLFITFFP+QAEK+ Q+ P +
Sbjct: 181 DSEGSSELQNAGKGGLVTVQGKISAVLGTVLICAYLFITFFPEQAEKLFQLAPAS 235


>ref|XP_002331043.1| predicted protein [Populus trichocarpa] gi|222872973|gb|EEF10104.1|
           predicted protein [Populus trichocarpa]
          Length = 235

 Score =  321 bits (822), Expect = 2e-85
 Identities = 161/235 (68%), Positives = 190/235 (80%), Gaps = 7/235 (2%)
 Frame = -2

Query: 962 MAGLGFCTPISCTR----TSWLVLESTR---MPYKPLRSRGVVIRAEVNFVNSQDAKELI 804
           MAG+  C     +R    TSWL  ++     +  KP R R   IRAEVNFVN  +AK+L+
Sbjct: 1   MAGIATCALTLSSRSNFGTSWLEFDTHHRRTIRGKPKRWRNFGIRAEVNFVNPDEAKKLV 60

Query: 803 AVEGYAVLDVRDKSQYERAHIKSCHHIPLFIENNDNDLGTIIKRTVHNNFSGLFFGLPFT 624
             EGYAVLDVRDK+QYERAHIKSC+H+PLFI+N DND GTIIKRTVHNNFSGLFFGLPFT
Sbjct: 61  TDEGYAVLDVRDKTQYERAHIKSCYHVPLFIQNQDNDFGTIIKRTVHNNFSGLFFGLPFT 120

Query: 623 KINADFLKLVKSQFSQDSKLLLVCQEGLRSAAAANKLEEAGFENISCITSGLQSVKPGTF 444
           K+N  F+  V+SQ S  SKLL+VCQEGLRS AAA KLE AGF+N++C+TSGLQSVKPGTF
Sbjct: 121 KLNDKFVDSVQSQLSPQSKLLIVCQEGLRSTAAATKLEAAGFKNVACVTSGLQSVKPGTF 180

Query: 443 DTVGSTELQNAGKAGLVTVQGKISAALGTVLICAYLFITFFPDQAEKILQMVPGN 279
           D+ GSTELQ+AGKAGL+T+QGKISA LGTVL+CAYLFITFFP+QAEK+LQ+ P +
Sbjct: 181 DSEGSTELQDAGKAGLITIQGKISAVLGTVLVCAYLFITFFPEQAEKLLQLAPSS 235


>ref|XP_002879974.1| hypothetical protein ARALYDRAFT_483311 [Arabidopsis lyrata subsp.
           lyrata] gi|297325813|gb|EFH56233.1| hypothetical protein
           ARALYDRAFT_483311 [Arabidopsis lyrata subsp. lyrata]
          Length = 234

 Score =  319 bits (817), Expect = 8e-85
 Identities = 153/192 (79%), Positives = 178/192 (92%)
 Frame = -2

Query: 875 LRSRGVVIRAEVNFVNSQDAKELIAVEGYAVLDVRDKSQYERAHIKSCHHIPLFIENNDN 696
           +R R + I AEV FVN+++AK+LIA EGY+V+DVRDK+Q+ERAHIKSC HIPLFI N DN
Sbjct: 38  IRRRSLRIAAEVKFVNAEEAKQLIAEEGYSVVDVRDKTQFERAHIKSCSHIPLFIYNEDN 97

Query: 695 DLGTIIKRTVHNNFSGLFFGLPFTKINADFLKLVKSQFSQDSKLLLVCQEGLRSAAAANK 516
           D+GTIIKRTVHNNFSGLFFGLPFTK+N DFLK VK++FSQD KLLLVCQEGLRSAAAA++
Sbjct: 98  DIGTIIKRTVHNNFSGLFFGLPFTKVNPDFLKSVKNEFSQDRKLLLVCQEGLRSAAAASR 157

Query: 515 LEEAGFENISCITSGLQSVKPGTFDTVGSTELQNAGKAGLVTVQGKISAALGTVLICAYL 336
           LEEAG+ENI+C+TSGLQSVKPGTF++VGSTELQNAGKAGL+T+QGKISA LGTVL+CAYL
Sbjct: 158 LEEAGYENIACVTSGLQSVKPGTFESVGSTELQNAGKAGLITIQGKISAVLGTVLVCAYL 217

Query: 335 FITFFPDQAEKI 300
           FI FFPDQAEK+
Sbjct: 218 FIQFFPDQAEKL 229


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