BLASTX nr result

ID: Coptis25_contig00005143 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00005143
         (452 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003631271.1| PREDICTED: glucan endo-1,3-beta-glucosidase-...   168   5e-40
emb|CAN59926.1| hypothetical protein VITISV_043884 [Vitis vinifera]   164   5e-39
ref|XP_002525370.1| Glucan endo-1,3-beta-glucosidase, acidic iso...   161   4e-38
gb|ADR83569.1| beta-1,3-glucanase [Lycium barbarum] gi|313906956...   158   5e-37
emb|CAA82271.1| beta-1,3-glucanase [Nicotiana tabacum]                156   1e-36

>ref|XP_003631271.1| PREDICTED: glucan endo-1,3-beta-glucosidase-like [Vitis vinifera]
          Length = 338

 Score =  168 bits (425), Expect = 5e-40
 Identities = 82/150 (54%), Positives = 107/150 (71%)
 Frame = +1

Query: 1   TAAASIGVCYGRXXXXXXXXXXXXXXXXXXGISNVRLFDADPTILQAFSGAAVELMIGVP 180
           TAAA +G+CYG                   GISN+RLF+ADP  L+ FSG  ++LMIGVP
Sbjct: 18  TAAAPVGICYGIVANNLPPASNVVNLLKSNGISNIRLFNADPDTLKPFSGTGIQLMIGVP 77

Query: 181 NENLPDLASGGPDAANQWLQNNIFAHVPANQIRYIAVGNEIFFKDTFYMPFVVPAMRNLQ 360
           NE LP LA+G  + +  WLQ+NIFA+V ++Q+RYIAVGNE+F KD FY P+V+P++ +L 
Sbjct: 78  NEVLPSLATGTVNVSLDWLQSNIFAYVSSDQVRYIAVGNEVFLKDPFYTPYVLPSIISLY 137

Query: 361 QVLQTLNLSDKIKLSSPHAASILSTPFPPS 450
           Q LQ L L+DKIK+SSPHAAS+LS+  PPS
Sbjct: 138 QALQILGLADKIKVSSPHAASVLSSSSPPS 167


>emb|CAN59926.1| hypothetical protein VITISV_043884 [Vitis vinifera]
          Length = 337

 Score =  164 bits (416), Expect = 5e-39
 Identities = 80/148 (54%), Positives = 105/148 (70%)
 Frame = +1

Query: 7   AASIGVCYGRXXXXXXXXXXXXXXXXXXGISNVRLFDADPTILQAFSGAAVELMIGVPNE 186
           AA +G+CYG                   GISN+RLF+ADP  L+ FSG  ++LMIGVPNE
Sbjct: 19  AAPVGICYGIVANNLPPASNVVNLLKSNGISNIRLFNADPDTLKPFSGTGIQLMIGVPNE 78

Query: 187 NLPDLASGGPDAANQWLQNNIFAHVPANQIRYIAVGNEIFFKDTFYMPFVVPAMRNLQQV 366
            LP LA+G  + +  WLQ+NIFA+V ++Q+RYIAVGNE+F KD FY P+V+P++ +L Q 
Sbjct: 79  VLPSLATGTVNVSLDWLQSNIFAYVSSDQVRYIAVGNEVFLKDPFYTPYVLPSIISLYQA 138

Query: 367 LQTLNLSDKIKLSSPHAASILSTPFPPS 450
           LQ L L+DKIK+SSPHAAS+LS+  PPS
Sbjct: 139 LQILGLADKIKVSSPHAASVLSSSSPPS 166


>ref|XP_002525370.1| Glucan endo-1,3-beta-glucosidase, acidic isoform precursor,
           putative [Ricinus communis] gi|223535333|gb|EEF37008.1|
           Glucan endo-1,3-beta-glucosidase, acidic isoform
           precursor, putative [Ricinus communis]
          Length = 328

 Score =  161 bits (408), Expect = 4e-38
 Identities = 80/150 (53%), Positives = 101/150 (67%)
 Frame = +1

Query: 1   TAAASIGVCYGRXXXXXXXXXXXXXXXXXXGISNVRLFDADPTILQAFSGAAVELMIGVP 180
           +AAA IGVCYGR                  GI NVR+FDADP  L+AFSG+ + L++GVP
Sbjct: 30  SAAAPIGVCYGRVANNLPPPSSFVKLLNSNGIKNVRIFDADPETLKAFSGSRISLVVGVP 89

Query: 181 NENLPDLASGGPDAANQWLQNNIFAHVPANQIRYIAVGNEIFFKDTFYMPFVVPAMRNLQ 360
           NENL  LA     A+  WLQ+NIFAH+P ++++YIAVGNE+  K+ FY  +VVPAM NL 
Sbjct: 90  NENLRFLADADVKASLDWLQSNIFAHIPPSRVKYIAVGNEVLLKNPFYTRYVVPAMMNLY 149

Query: 361 QVLQTLNLSDKIKLSSPHAASILSTPFPPS 450
           + L  LNL   IKLSSP AAS+LS+ +PPS
Sbjct: 150 EALTMLNLESSIKLSSPQAASVLSSSYPPS 179


>gb|ADR83569.1| beta-1,3-glucanase [Lycium barbarum] gi|313906956|gb|ADR83570.1|
           beta-1,3-glucanase [Lycium barbarum]
          Length = 344

 Score =  158 bits (399), Expect = 5e-37
 Identities = 78/150 (52%), Positives = 97/150 (64%)
 Frame = +1

Query: 1   TAAASIGVCYGRXXXXXXXXXXXXXXXXXXGISNVRLFDADPTILQAFSGAAVELMIGVP 180
           T  ASIGVCYGR                  GIS +RLF+ DP  LQ F G  +EL+IGVP
Sbjct: 24  TVEASIGVCYGRVGTNLPPISEAINLIKSNGISRIRLFNPDPEALQPFCGTGIELLIGVP 83

Query: 181 NENLPDLASGGPDAANQWLQNNIFAHVPANQIRYIAVGNEIFFKDTFYMPFVVPAMRNLQ 360
           NE LP LA+     + +WLQ+NIFAHV  NQ++Y+ VGNEIF KD +Y P++VP +  L 
Sbjct: 84  NEILPTLANNPVTTSIEWLQSNIFAHVSPNQVKYLVVGNEIFLKDPYYSPYIVPTITKLY 143

Query: 361 QVLQTLNLSDKIKLSSPHAASILSTPFPPS 450
           Q LQTL L+  IKLSS HA++ILS  +PPS
Sbjct: 144 QALQTLGLATTIKLSSSHASTILSNSYPPS 173


>emb|CAA82271.1| beta-1,3-glucanase [Nicotiana tabacum]
          Length = 344

 Score =  156 bits (395), Expect = 1e-36
 Identities = 76/147 (51%), Positives = 97/147 (65%)
 Frame = +1

Query: 10  ASIGVCYGRXXXXXXXXXXXXXXXXXXGISNVRLFDADPTILQAFSGAAVELMIGVPNEN 189
           A++GVCYGR                  G+S +RLF+ DP  LQ F+G  +EL++GVPNE 
Sbjct: 27  AAVGVCYGRVGTNLPPPSEAINLIKSIGVSRIRLFNPDPEALQPFAGTGIELLVGVPNEI 86

Query: 190 LPDLASGGPDAANQWLQNNIFAHVPANQIRYIAVGNEIFFKDTFYMPFVVPAMRNLQQVL 369
           LP LA+     + +WLQ NIFAHV   Q++Y+AVGNEIF KD FY P +VPA+ NL Q L
Sbjct: 87  LPTLANSPVTISMEWLQTNIFAHVSPPQVKYLAVGNEIFLKDPFYSPHIVPAISNLYQAL 146

Query: 370 QTLNLSDKIKLSSPHAASILSTPFPPS 450
           QTL L+  IKLSS HA++ILS  +PPS
Sbjct: 147 QTLGLATTIKLSSSHASTILSNSYPPS 173


Top