BLASTX nr result

ID: Coptis25_contig00005136 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00005136
         (1015 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003551082.1| PREDICTED: AP-2 complex subunit alpha-2-like...   138   2e-45
ref|XP_002527437.1| AP-2 complex subunit alpha, putative [Ricinu...   134   2e-45
ref|XP_002328183.1| predicted protein [Populus trichocarpa] gi|2...   131   1e-44
ref|XP_003540215.1| PREDICTED: AP-2 complex subunit alpha-2-like...   137   2e-44
ref|XP_002874085.1| hypothetical protein ARALYDRAFT_489126 [Arab...   135   4e-44

>ref|XP_003551082.1| PREDICTED: AP-2 complex subunit alpha-2-like [Glycine max]
          Length = 1020

 Score =  138 bits (348), Expect(2) = 2e-45
 Identities = 69/77 (89%), Positives = 72/77 (93%)
 Frame = +2

Query: 2    LKLQEVVRGVKPLSLPEMANLFNSFQLTVSPGLDPNPNNLVASTTFYSESTRAMLCLVRM 181
            LKLQEVVRGV+PL L EMANLFNSF LTV PGLDPNPNNLVASTTFYSESTRAMLCL R+
Sbjct: 886  LKLQEVVRGVRPLPLLEMANLFNSFHLTVCPGLDPNPNNLVASTTFYSESTRAMLCLARI 945

Query: 182  ETDPSDRTQLRMTVASG 232
            ETDP+DRTQLRMTVASG
Sbjct: 946  ETDPADRTQLRMTVASG 962



 Score = 71.6 bits (174), Expect(2) = 2e-45
 Identities = 41/60 (68%), Positives = 45/60 (75%), Gaps = 8/60 (13%)
 Frame = +3

Query: 282  DPTLTFELKEFIKEQLVSIPLVSAPTPLPSQVQPTSPPV--------ALTDPGAMLAGLL 437
            DPTLTFELKEFIK+QLVSIP  +A T +P+Q  PTSPPV        ALTDPGAMLA LL
Sbjct: 963  DPTLTFELKEFIKDQLVSIP--TAATHVPTQPAPTSPPVAQPGSAPTALTDPGAMLAALL 1020


>ref|XP_002527437.1| AP-2 complex subunit alpha, putative [Ricinus communis]
            gi|223533172|gb|EEF34929.1| AP-2 complex subunit alpha,
            putative [Ricinus communis]
          Length = 1018

 Score =  134 bits (338), Expect(2) = 2e-45
 Identities = 65/77 (84%), Positives = 73/77 (94%)
 Frame = +2

Query: 2    LKLQEVVRGVKPLSLPEMANLFNSFQLTVSPGLDPNPNNLVASTTFYSESTRAMLCLVRM 181
            LKLQEVVRGV+PL L +MA+LFNSF++ +SPGLDPNPNNLVASTTFYSESTR MLCLVR+
Sbjct: 889  LKLQEVVRGVRPLPLADMASLFNSFRMMISPGLDPNPNNLVASTTFYSESTRQMLCLVRI 948

Query: 182  ETDPSDRTQLRMTVASG 232
            ETDP+DRTQLRMTVASG
Sbjct: 949  ETDPADRTQLRMTVASG 965



 Score = 75.5 bits (184), Expect(2) = 2e-45
 Identities = 39/53 (73%), Positives = 41/53 (77%), Gaps = 1/53 (1%)
 Frame = +3

Query: 282  DPTLTFELKEFIKEQLVSIPLV-SAPTPLPSQVQPTSPPVALTDPGAMLAGLL 437
            DPTLTFELKEFIKEQLVSIP     PTP P   QP +P  ALTDPGA+LAGLL
Sbjct: 966  DPTLTFELKEFIKEQLVSIPTAPRGPTPAPPVAQPPNPVTALTDPGAVLAGLL 1018


>ref|XP_002328183.1| predicted protein [Populus trichocarpa] gi|222837698|gb|EEE76063.1|
            predicted protein [Populus trichocarpa]
          Length = 1014

 Score =  131 bits (330), Expect(2) = 1e-44
 Identities = 65/77 (84%), Positives = 70/77 (90%)
 Frame = +2

Query: 2    LKLQEVVRGVKPLSLPEMANLFNSFQLTVSPGLDPNPNNLVASTTFYSESTRAMLCLVRM 181
            LKLQEVVRGV+PL L EM NLFNS +LTV PGLDPNPNNLVASTTFYSESTR MLCL+R+
Sbjct: 886  LKLQEVVRGVRPLPLIEMTNLFNSLRLTVCPGLDPNPNNLVASTTFYSESTRPMLCLIRI 945

Query: 182  ETDPSDRTQLRMTVASG 232
            ETDP+D TQLRMTVASG
Sbjct: 946  ETDPADLTQLRMTVASG 962



 Score = 75.5 bits (184), Expect(2) = 1e-44
 Identities = 41/53 (77%), Positives = 42/53 (79%), Gaps = 1/53 (1%)
 Frame = +3

Query: 282  DPTLTFELKEFIKEQLVSIPLVS-APTPLPSQVQPTSPPVALTDPGAMLAGLL 437
            DPTLTFELKEFIKEQLVSIP  S  P P P   QPTS P ALTDPGA+LAGLL
Sbjct: 963  DPTLTFELKEFIKEQLVSIPTASRPPAPAPPAAQPTS-PAALTDPGALLAGLL 1014


>ref|XP_003540215.1| PREDICTED: AP-2 complex subunit alpha-2-like [Glycine max]
          Length = 1018

 Score =  137 bits (345), Expect(2) = 2e-44
 Identities = 68/77 (88%), Positives = 72/77 (93%)
 Frame = +2

Query: 2    LKLQEVVRGVKPLSLPEMANLFNSFQLTVSPGLDPNPNNLVASTTFYSESTRAMLCLVRM 181
            LKLQEVVRGV+PL L EMANLFNS+ LTV PGLDPNPNNLV STTFYSESTRAMLCLVR+
Sbjct: 884  LKLQEVVRGVRPLPLLEMANLFNSYHLTVCPGLDPNPNNLVVSTTFYSESTRAMLCLVRI 943

Query: 182  ETDPSDRTQLRMTVASG 232
            ETDP+DRTQLRMTVASG
Sbjct: 944  ETDPADRTQLRMTVASG 960



 Score = 69.3 bits (168), Expect(2) = 2e-44
 Identities = 38/60 (63%), Positives = 45/60 (75%), Gaps = 8/60 (13%)
 Frame = +3

Query: 282  DPTLTFELKEFIKEQLVSIPLVSAPTPLPSQVQPTSPPV--------ALTDPGAMLAGLL 437
            DPTLTFE+KEFIK+QLVSIP ++  T +P+Q  PTSPP+        ALTDPGAMLA LL
Sbjct: 961  DPTLTFEMKEFIKDQLVSIPAIA--TRVPTQPAPTSPPLAQPGSAPAALTDPGAMLAALL 1018


>ref|XP_002874085.1| hypothetical protein ARALYDRAFT_489126 [Arabidopsis lyrata subsp.
            lyrata] gi|297319922|gb|EFH50344.1| hypothetical protein
            ARALYDRAFT_489126 [Arabidopsis lyrata subsp. lyrata]
          Length = 1016

 Score =  135 bits (341), Expect(2) = 4e-44
 Identities = 65/77 (84%), Positives = 72/77 (93%)
 Frame = +2

Query: 2    LKLQEVVRGVKPLSLPEMANLFNSFQLTVSPGLDPNPNNLVASTTFYSESTRAMLCLVRM 181
            LKLQEVVRGV+PL+LPEMANLFNSF +T+ PGLDPNPNNLVASTTFYSEST A+LCL R+
Sbjct: 879  LKLQEVVRGVRPLALPEMANLFNSFHVTICPGLDPNPNNLVASTTFYSESTGAILCLARI 938

Query: 182  ETDPSDRTQLRMTVASG 232
            ETDP+DRTQLRMTV SG
Sbjct: 939  ETDPADRTQLRMTVGSG 955



 Score = 69.7 bits (169), Expect(2) = 4e-44
 Identities = 37/61 (60%), Positives = 41/61 (67%), Gaps = 9/61 (14%)
 Frame = +3

Query: 282  DPTLTFELKEFIKEQLVSIPL---------VSAPTPLPSQVQPTSPPVALTDPGAMLAGL 434
            DPTLTFELKEFIKEQL++IP+          SAP+P P   QP SP     DPGAMLAGL
Sbjct: 956  DPTLTFELKEFIKEQLITIPMGSRALVPAAGSAPSPAPPVAQPPSPAALADDPGAMLAGL 1015

Query: 435  L 437
            L
Sbjct: 1016 L 1016


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