BLASTX nr result

ID: Coptis25_contig00005135 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00005135
         (712 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI31611.3| unnamed protein product [Vitis vinifera]              266   4e-69
ref|XP_002282343.2| PREDICTED: protein YIPF1 homolog [Vitis vini...   262   4e-68
ref|NP_001241169.1| uncharacterized protein LOC100813483 [Glycin...   253   3e-65
ref|XP_004159789.1| PREDICTED: LOW QUALITY PROTEIN: protein YIPF...   248   1e-63
ref|XP_004138449.1| PREDICTED: protein YIPF1 homolog [Cucumis sa...   248   1e-63

>emb|CBI31611.3| unnamed protein product [Vitis vinifera]
          Length = 269

 Score =  266 bits (679), Expect = 4e-69
 Identities = 123/184 (66%), Positives = 153/184 (83%), Gaps = 1/184 (0%)
 Frame = +3

Query: 162 GSVPAVISEDKKAYETSVPEERLEIFPPNHGDRG-RGYQSLGSYNGVDEQPATSNWKGVF 338
           GSVPAV++E+K      VPE  L+IFPPN+G RG +GYQ+ GS  G   Q + SNWKGVF
Sbjct: 15  GSVPAVVNEEKSIATYEVPEANLQIFPPNNGARGGQGYQTPGSPAGDGPQQSASNWKGVF 74

Query: 339 SISSYTEYFDVDTDVVLDRIKSSLYPVNGDFFGKISNSPDLYGMIWISTSLVFVIAALGN 518
           SISSYT+YF+VDTDVVL+R+ SSL+P+ GDFF KI  +PDLYG+IW ST+L+FVIAALGN
Sbjct: 75  SISSYTQYFNVDTDVVLNRLISSLHPIGGDFFSKIDANPDLYGLIWTSTTLIFVIAALGN 134

Query: 519 CATYLISKRSDNSTSWSFDVSYLNVAACAVYGYSILVPTAFYFLLQYFGTSASLVRLWCM 698
           CATYL  K+S +ST+WSFDV YLN+AAC++YGY+++VP AFYFLLQY G++ASLVR WC+
Sbjct: 135 CATYLTKKQSSSSTTWSFDVGYLNLAACSIYGYALVVPVAFYFLLQYLGSNASLVRFWCL 194

Query: 699 WGYS 710
           WGYS
Sbjct: 195 WGYS 198


>ref|XP_002282343.2| PREDICTED: protein YIPF1 homolog [Vitis vinifera]
          Length = 270

 Score =  262 bits (670), Expect = 4e-68
 Identities = 123/185 (66%), Positives = 153/185 (82%), Gaps = 2/185 (1%)
 Frame = +3

Query: 162 GSVPAVISEDKKAYETSVPEERLEIFPPNHGDRG-RGYQSLGS-YNGVDEQPATSNWKGV 335
           GSVPAV++E+K      VPE  L+IFPPN+G RG +GYQ+ GS   G   Q + SNWKGV
Sbjct: 15  GSVPAVVNEEKSIATYEVPEANLQIFPPNNGARGGQGYQTPGSPAEGDGPQQSASNWKGV 74

Query: 336 FSISSYTEYFDVDTDVVLDRIKSSLYPVNGDFFGKISNSPDLYGMIWISTSLVFVIAALG 515
           FSISSYT+YF+VDTDVVL+R+ SSL+P+ GDFF KI  +PDLYG+IW ST+L+FVIAALG
Sbjct: 75  FSISSYTQYFNVDTDVVLNRLISSLHPIGGDFFSKIDANPDLYGLIWTSTTLIFVIAALG 134

Query: 516 NCATYLISKRSDNSTSWSFDVSYLNVAACAVYGYSILVPTAFYFLLQYFGTSASLVRLWC 695
           NCATYL  K+S +ST+WSFDV YLN+AAC++YGY+++VP AFYFLLQY G++ASLVR WC
Sbjct: 135 NCATYLTKKQSSSSTTWSFDVGYLNLAACSIYGYALVVPVAFYFLLQYLGSNASLVRFWC 194

Query: 696 MWGYS 710
           +WGYS
Sbjct: 195 LWGYS 199


>ref|NP_001241169.1| uncharacterized protein LOC100813483 [Glycine max]
           gi|255641790|gb|ACU21164.1| unknown [Glycine max]
          Length = 270

 Score =  253 bits (646), Expect = 3e-65
 Identities = 119/184 (64%), Positives = 148/184 (80%), Gaps = 1/184 (0%)
 Frame = +3

Query: 162 GSVPAVISEDKKAYETSVPEERLEIFPPNHG-DRGRGYQSLGSYNGVDEQPATSNWKGVF 338
           GSVPAV++E+  A +       ++IFPPN+G DRG GY +LGS     EQ   +NW+GVF
Sbjct: 16  GSVPAVVTEENNASKHVATSANMQIFPPNNGGDRGPGYNTLGSPTEAFEQQPANNWRGVF 75

Query: 339 SISSYTEYFDVDTDVVLDRIKSSLYPVNGDFFGKISNSPDLYGMIWISTSLVFVIAALGN 518
           SISSY+EYF+VDTDVVL R+ SSL PV GDFF KI  +PDLYG+IWIST+LVFV+A+LGN
Sbjct: 76  SISSYSEYFNVDTDVVLIRLISSLNPVAGDFFSKIDANPDLYGLIWISTTLVFVLASLGN 135

Query: 519 CATYLISKRSDNSTSWSFDVSYLNVAACAVYGYSILVPTAFYFLLQYFGTSASLVRLWCM 698
            AT+L+ K  DNSTSWSFDVSY+NVAAC++YGY+I+VP A+YF LQY G++ASL+R WCM
Sbjct: 136 LATFLMQKHVDNSTSWSFDVSYVNVAACSIYGYAIVVPLAYYFFLQYMGSNASLIRFWCM 195

Query: 699 WGYS 710
           WGYS
Sbjct: 196 WGYS 199


>ref|XP_004159789.1| PREDICTED: LOW QUALITY PROTEIN: protein YIPF1 homolog [Cucumis
           sativus]
          Length = 270

 Score =  248 bits (632), Expect = 1e-63
 Identities = 116/186 (62%), Positives = 152/186 (81%), Gaps = 3/186 (1%)
 Frame = +3

Query: 162 GSVPAVISED--KKAYETSVPEERLEIFPP-NHGDRGRGYQSLGSYNGVDEQPATSNWKG 332
           GSVPAVI+E+  K   E   PE  ++ FPP N GDRGRGYQ+L S +   +QP+ ++WKG
Sbjct: 15  GSVPAVINEEIEKSGTEHETPEAIMQTFPPTNGGDRGRGYQTLESPSDSHQQPS-NDWKG 73

Query: 333 VFSISSYTEYFDVDTDVVLDRIKSSLYPVNGDFFGKISNSPDLYGMIWISTSLVFVIAAL 512
           VFS+SSY++YF+VDTD+V++R+ SSLYP+ GDF  KI  +PDLYG++WI+T+LVFV+AAL
Sbjct: 74  VFSVSSYSQYFNVDTDIVMNRLISSLYPIGGDFSSKIDANPDLYGLVWITTTLVFVLAAL 133

Query: 513 GNCATYLISKRSDNSTSWSFDVSYLNVAACAVYGYSILVPTAFYFLLQYFGTSASLVRLW 692
           GNCATYL+ KRSD   +WSFDVSY+NVAA +VYGY+I+VP AFYF LQY G+++SL+R W
Sbjct: 134 GNCATYLMQKRSDQGAAWSFDVSYMNVAAGSVYGYAIVVPMAFYFSLQYLGSNSSLIRFW 193

Query: 693 CMWGYS 710
           C+WGYS
Sbjct: 194 CLWGYS 199


>ref|XP_004138449.1| PREDICTED: protein YIPF1 homolog [Cucumis sativus]
          Length = 270

 Score =  248 bits (632), Expect = 1e-63
 Identities = 116/186 (62%), Positives = 152/186 (81%), Gaps = 3/186 (1%)
 Frame = +3

Query: 162 GSVPAVISED--KKAYETSVPEERLEIFPP-NHGDRGRGYQSLGSYNGVDEQPATSNWKG 332
           GSVPAVI+E+  K   E   PE  ++ FPP N GDRGRGYQ+L S +   +QP+ ++WKG
Sbjct: 15  GSVPAVINEEIEKSGTEHETPEAIMQTFPPTNGGDRGRGYQTLESPSDSHQQPS-NDWKG 73

Query: 333 VFSISSYTEYFDVDTDVVLDRIKSSLYPVNGDFFGKISNSPDLYGMIWISTSLVFVIAAL 512
           VFS+SSY++YF+VDTD+V++R+ SSLYP+ GDF  KI  +PDLYG++WI+T+LVFV+AAL
Sbjct: 74  VFSVSSYSQYFNVDTDIVMNRLISSLYPIGGDFSSKIDANPDLYGLVWITTTLVFVLAAL 133

Query: 513 GNCATYLISKRSDNSTSWSFDVSYLNVAACAVYGYSILVPTAFYFLLQYFGTSASLVRLW 692
           GNCATYL+ KRSD   +WSFDVSY+NVAA +VYGY+I+VP AFYF LQY G+++SL+R W
Sbjct: 134 GNCATYLMQKRSDQGAAWSFDVSYMNVAAGSVYGYAIVVPMAFYFSLQYLGSNSSLIRFW 193

Query: 693 CMWGYS 710
           C+WGYS
Sbjct: 194 CLWGYS 199


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