BLASTX nr result

ID: Coptis25_contig00005118 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00005118
         (801 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003537940.1| PREDICTED: uncharacterized protein LOC100782...   271   9e-71
ref|XP_002264803.2| PREDICTED: UPF0454 protein C12orf49 homolog ...   271   2e-70
emb|CBI36657.3| unnamed protein product [Vitis vinifera]              271   2e-70
ref|XP_002332721.1| predicted protein [Populus trichocarpa] gi|2...   264   1e-68
gb|ABK94599.1| unknown [Populus trichocarpa]                          264   1e-68

>ref|XP_003537940.1| PREDICTED: uncharacterized protein LOC100782588 [Glycine max]
          Length = 281

 Score =  271 bits (694), Expect = 9e-71
 Identities = 122/158 (77%), Positives = 143/158 (90%)
 Frame = -3

Query: 799 AKPVTAGTYASVFDFCAGRCRHSSESVVHENAYISEFHHCYSLPSNFSGTSNTHLEARLS 620
           AKP TA TY+SVFD+CAGRCRHSSESVVHENAYIS+FHHC+SL SN SG ++T  EARLS
Sbjct: 124 AKPTTARTYSSVFDYCAGRCRHSSESVVHENAYISDFHHCFSLSSNSSGKNSTLTEARLS 183

Query: 619 GITVLVGRQGESCDSVCKSKGQSCVPGKLVVLNKCELMQRYMSCKGECLASIGADQPAEV 440
           GI V+VGRQGESC+SVCKS+GQSCVP KLVVLN C+++Q+YMSCKG CLAS+GADQPAEV
Sbjct: 184 GINVVVGRQGESCNSVCKSRGQSCVPNKLVVLNSCDIIQKYMSCKGSCLASVGADQPAEV 243

Query: 439 VEDAPLHLHPGACLYTRTQAVLCCEGSHRHTRRLCPCA 326
           V DAP+HL+PG+CLYT TQ++L C+G H+HTRRLCPCA
Sbjct: 244 VYDAPVHLNPGSCLYTETQSILSCDGLHQHTRRLCPCA 281


>ref|XP_002264803.2| PREDICTED: UPF0454 protein C12orf49 homolog [Vitis vinifera]
          Length = 279

 Score =  271 bits (692), Expect = 2e-70
 Identities = 125/159 (78%), Positives = 142/159 (89%), Gaps = 1/159 (0%)
 Frame = -3

Query: 799 AKPVTAGTYASVFDFCAGRCRHSSESVVHENAYISEFHHCYSLPSNFS-GTSNTHLEARL 623
           AKPVTAG YASVFDFC GRCRH+SESVVHENAY+S+FHHC+SLPSN + G  + + E RL
Sbjct: 121 AKPVTAGAYASVFDFCTGRCRHNSESVVHENAYLSDFHHCFSLPSNSTAGGVDRNPELRL 180

Query: 622 SGITVLVGRQGESCDSVCKSKGQSCVPGKLVVLNKCELMQRYMSCKGECLASIGADQPAE 443
           +GI V+VGRQGESCDSVCKS GQSCVP KL VLN+CE+MQ+YMSCKG CLASIGADQPAE
Sbjct: 181 NGIHVVVGRQGESCDSVCKSNGQSCVPSKLSVLNQCEIMQKYMSCKGACLASIGADQPAE 240

Query: 442 VVEDAPLHLHPGACLYTRTQAVLCCEGSHRHTRRLCPCA 326
           VV+DAP HL+PGACLYTRTQ +L C+GSH+HTRRLCPCA
Sbjct: 241 VVDDAPRHLNPGACLYTRTQTILSCDGSHQHTRRLCPCA 279


>emb|CBI36657.3| unnamed protein product [Vitis vinifera]
          Length = 273

 Score =  271 bits (692), Expect = 2e-70
 Identities = 125/159 (78%), Positives = 142/159 (89%), Gaps = 1/159 (0%)
 Frame = -3

Query: 799 AKPVTAGTYASVFDFCAGRCRHSSESVVHENAYISEFHHCYSLPSNFS-GTSNTHLEARL 623
           AKPVTAG YASVFDFC GRCRH+SESVVHENAY+S+FHHC+SLPSN + G  + + E RL
Sbjct: 115 AKPVTAGAYASVFDFCTGRCRHNSESVVHENAYLSDFHHCFSLPSNSTAGGVDRNPELRL 174

Query: 622 SGITVLVGRQGESCDSVCKSKGQSCVPGKLVVLNKCELMQRYMSCKGECLASIGADQPAE 443
           +GI V+VGRQGESCDSVCKS GQSCVP KL VLN+CE+MQ+YMSCKG CLASIGADQPAE
Sbjct: 175 NGIHVVVGRQGESCDSVCKSNGQSCVPSKLSVLNQCEIMQKYMSCKGACLASIGADQPAE 234

Query: 442 VVEDAPLHLHPGACLYTRTQAVLCCEGSHRHTRRLCPCA 326
           VV+DAP HL+PGACLYTRTQ +L C+GSH+HTRRLCPCA
Sbjct: 235 VVDDAPRHLNPGACLYTRTQTILSCDGSHQHTRRLCPCA 273


>ref|XP_002332721.1| predicted protein [Populus trichocarpa] gi|222832884|gb|EEE71361.1|
           predicted protein [Populus trichocarpa]
          Length = 245

 Score =  264 bits (675), Expect = 1e-68
 Identities = 122/158 (77%), Positives = 139/158 (87%)
 Frame = -3

Query: 799 AKPVTAGTYASVFDFCAGRCRHSSESVVHENAYISEFHHCYSLPSNFSGTSNTHLEARLS 620
           AKP TA +Y SVFDFCAGRCRH+SESVVHENAY S+FHHC+SLPSN SG + T LEARL 
Sbjct: 88  AKPSTAVSYTSVFDFCAGRCRHNSESVVHENAYRSDFHHCFSLPSNSSGANYTQLEARLG 147

Query: 619 GITVLVGRQGESCDSVCKSKGQSCVPGKLVVLNKCELMQRYMSCKGECLASIGADQPAEV 440
           GI V++G+QGESCDSVCKS GQSCV  KL+VLN+C++MQ+YMSCKG CLASIG DQPAEV
Sbjct: 148 GINVVIGKQGESCDSVCKSNGQSCVLNKLLVLNQCDVMQKYMSCKGGCLASIGTDQPAEV 207

Query: 439 VEDAPLHLHPGACLYTRTQAVLCCEGSHRHTRRLCPCA 326
           VEDAP HL+PGACLYTRTQ++L C+GS  HTRRLCPCA
Sbjct: 208 VEDAPRHLNPGACLYTRTQSLLSCDGSLWHTRRLCPCA 245


>gb|ABK94599.1| unknown [Populus trichocarpa]
          Length = 268

 Score =  264 bits (675), Expect = 1e-68
 Identities = 122/158 (77%), Positives = 139/158 (87%)
 Frame = -3

Query: 799 AKPVTAGTYASVFDFCAGRCRHSSESVVHENAYISEFHHCYSLPSNFSGTSNTHLEARLS 620
           AKP TA +Y SVFDFCAGRCRH+SESVVHENAY S+FHHC+SLPSN SG + T LEARL 
Sbjct: 111 AKPSTAVSYTSVFDFCAGRCRHNSESVVHENAYRSDFHHCFSLPSNSSGANYTQLEARLG 170

Query: 619 GITVLVGRQGESCDSVCKSKGQSCVPGKLVVLNKCELMQRYMSCKGECLASIGADQPAEV 440
           GI V++G+QGESCDSVCKS GQSCV  KL+VLN+C++MQ+YMSCKG CLASIG DQPAEV
Sbjct: 171 GINVVIGKQGESCDSVCKSNGQSCVLNKLLVLNQCDVMQKYMSCKGGCLASIGTDQPAEV 230

Query: 439 VEDAPLHLHPGACLYTRTQAVLCCEGSHRHTRRLCPCA 326
           VEDAP HL+PGACLYTRTQ++L C+GS  HTRRLCPCA
Sbjct: 231 VEDAPRHLNPGACLYTRTQSLLSCDGSLWHTRRLCPCA 268


Top