BLASTX nr result

ID: Coptis25_contig00005116 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00005116
         (464 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002303604.1| predicted protein [Populus trichocarpa] gi|1...    97   1e-18
ref|XP_002299512.1| predicted protein [Populus trichocarpa] gi|2...    97   1e-18
ref|XP_002278988.1| PREDICTED: uncharacterized protein LOC100250...    96   4e-18
gb|ABK93358.1| unknown [Populus trichocarpa]                           95   5e-18
ref|XP_002509849.1| SP1L, putative [Ricinus communis] gi|2235497...    88   8e-16

>ref|XP_002303604.1| predicted protein [Populus trichocarpa] gi|118481859|gb|ABK92866.1|
           unknown [Populus trichocarpa]
           gi|118484209|gb|ABK93985.1| unknown [Populus
           trichocarpa] gi|222841036|gb|EEE78583.1| predicted
           protein [Populus trichocarpa]
          Length = 99

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 50/80 (62%), Positives = 58/80 (72%), Gaps = 2/80 (2%)
 Frame = +2

Query: 74  DEPTRPPLVMKTPVTKPPWGDDNTTEKAPQVYAPSN--VTNYYFRTQGQNTGNFITDRPS 247
           ++P+ PP     PV  PP+G D T EK+P   +     V+N Y R QGQNTGNFITDRPS
Sbjct: 22  EQPSAPP--PSRPVNLPPYGVDITIEKSPDSGSSEKKPVSNNYHRAQGQNTGNFITDRPS 79

Query: 248 TKVRSVPGGDSSLGYLFGDK 307
           TKV+SVPGGDSSLGYLFGDK
Sbjct: 80  TKVKSVPGGDSSLGYLFGDK 99


>ref|XP_002299512.1| predicted protein [Populus trichocarpa] gi|222846770|gb|EEE84317.1|
           predicted protein [Populus trichocarpa]
          Length = 99

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 50/80 (62%), Positives = 58/80 (72%), Gaps = 2/80 (2%)
 Frame = +2

Query: 74  DEPTRPPLVMKTPVTKPPWGDDNTTEKAPQVYAPSN--VTNYYFRTQGQNTGNFITDRPS 247
           ++P+ PP +   PV  PP+G D T EK P   +     V+N Y R QGQNTGNFITDRPS
Sbjct: 22  EQPSAPPPLR--PVNLPPYGVDITVEKPPDSGSAEKKQVSNNYHRAQGQNTGNFITDRPS 79

Query: 248 TKVRSVPGGDSSLGYLFGDK 307
           TKV+SVPGGDSSLGYLFGDK
Sbjct: 80  TKVKSVPGGDSSLGYLFGDK 99


>ref|XP_002278988.1| PREDICTED: uncharacterized protein LOC100250191 [Vitis vinifera]
           gi|297742229|emb|CBI34378.3| unnamed protein product
           [Vitis vinifera]
          Length = 100

 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 49/81 (60%), Positives = 58/81 (71%), Gaps = 3/81 (3%)
 Frame = +2

Query: 74  DEPTRPPLVMKTPVTKPPWGDDNTTEKAPQVYAPS---NVTNYYFRTQGQNTGNFITDRP 244
           ++P+ PP+     +  PP+G D   EK P    P+   + +N Y RTQGQNTGNFITDRP
Sbjct: 22  EQPSEPPV--SPTIQLPPYGIDTIPEKPPNRPPPAEKQSSSNNYQRTQGQNTGNFITDRP 79

Query: 245 STKVRSVPGGDSSLGYLFGDK 307
           STKVRSVPGGDSSLGYLFGDK
Sbjct: 80  STKVRSVPGGDSSLGYLFGDK 100


>gb|ABK93358.1| unknown [Populus trichocarpa]
          Length = 99

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 49/80 (61%), Positives = 57/80 (71%), Gaps = 2/80 (2%)
 Frame = +2

Query: 74  DEPTRPPLVMKTPVTKPPWGDDNTTEKAPQVYAPSN--VTNYYFRTQGQNTGNFITDRPS 247
           ++P+ PP +   PV  PP+G D T EK P   +     V+N Y R QGQNTGNFI DRPS
Sbjct: 22  EQPSAPPPLR--PVNLPPYGVDITVEKPPDSGSAEKKQVSNNYHRAQGQNTGNFIADRPS 79

Query: 248 TKVRSVPGGDSSLGYLFGDK 307
           TKV+SVPGGDSSLGYLFGDK
Sbjct: 80  TKVKSVPGGDSSLGYLFGDK 99


>ref|XP_002509849.1| SP1L, putative [Ricinus communis] gi|223549748|gb|EEF51236.1| SP1L,
           putative [Ricinus communis]
          Length = 100

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 50/85 (58%), Positives = 55/85 (64%), Gaps = 7/85 (8%)
 Frame = +2

Query: 74  DEPTRPPLVMKTPVTKPPWGDDNTTEKAPQVYAPSN-------VTNYYFRTQGQNTGNFI 232
           + PT PP      V  PP+G D   EK      P+N       V+N Y R QGQNTGNFI
Sbjct: 22  ENPTTPP--PSQTVNLPPYGVDVIPEKNN----PNNLSAEKGKVSNNYHRAQGQNTGNFI 75

Query: 233 TDRPSTKVRSVPGGDSSLGYLFGDK 307
           TDRPSTKV+SVPGGDSSLGYLFGDK
Sbjct: 76  TDRPSTKVKSVPGGDSSLGYLFGDK 100


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