BLASTX nr result

ID: Coptis25_contig00005101 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00005101
         (559 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002262988.2| PREDICTED: uncharacterized protein LOC100260...   131   6e-29
emb|CBI25196.3| unnamed protein product [Vitis vinifera]              131   6e-29
gb|AAN62341.1|AF506028_8 CTV.12 [Citrus trifoliata]                   125   6e-27
ref|XP_002520372.1| Coiled-coil domain-containing protein, putat...   124   1e-26
ref|XP_004148048.1| PREDICTED: zinc finger protein 830-like [Cuc...   120   1e-25

>ref|XP_002262988.2| PREDICTED: uncharacterized protein LOC100260334 [Vitis vinifera]
          Length = 440

 Score =  131 bits (330), Expect = 6e-29
 Identities = 87/177 (49%), Positives = 104/177 (58%), Gaps = 4/177 (2%)
 Frame = +2

Query: 38  MDA---RKAAYRAKLKEAAQKRDKRIDSPLVRYNEHDQPICRVCDVVLKSESLWAAHQAS 208
           MDA   +KA YRAKLK   +K+ KRI+SPLVRYNE DQP+CRVCDV+LKSESLW AHQAS
Sbjct: 1   MDAQARKKALYRAKLKNLEEKKVKRIESPLVRYNEFDQPVCRVCDVILKSESLWDAHQAS 60

Query: 209 RKHHEAISAYKVKAGQXXXXXXXXXXXXXXXXAGQAQNIRKSEPPVELLPKARPSSTLPA 388
           RKHHEAI   K  A                  +    N   SEP +  L KA+ SS LPA
Sbjct: 61  RKHHEAIKNVKANAAGLTRANNAKPEAPKPESSTVLSN-ATSEPSMN-LQKAQLSSGLPA 118

Query: 389 DFFDTNETKRQKTGLGTGEKIGTDTLRGSVKSLDAVS-SKTVHGKSKSFASTSVKPL 556
           DFFD + TK+QK+G              +VK LD  S +KT  G S S  + S++PL
Sbjct: 119 DFFDNHVTKKQKSG------------NDAVKFLDPDSYNKT--GGSASAQTQSMEPL 161


>emb|CBI25196.3| unnamed protein product [Vitis vinifera]
          Length = 398

 Score =  131 bits (330), Expect = 6e-29
 Identities = 87/177 (49%), Positives = 104/177 (58%), Gaps = 4/177 (2%)
 Frame = +2

Query: 38  MDA---RKAAYRAKLKEAAQKRDKRIDSPLVRYNEHDQPICRVCDVVLKSESLWAAHQAS 208
           MDA   +KA YRAKLK   +K+ KRI+SPLVRYNE DQP+CRVCDV+LKSESLW AHQAS
Sbjct: 1   MDAQARKKALYRAKLKNLEEKKVKRIESPLVRYNEFDQPVCRVCDVILKSESLWDAHQAS 60

Query: 209 RKHHEAISAYKVKAGQXXXXXXXXXXXXXXXXAGQAQNIRKSEPPVELLPKARPSSTLPA 388
           RKHHEAI   K  A                  +    N   SEP +  L KA+ SS LPA
Sbjct: 61  RKHHEAIKNVKANAAGLTRANNAKPEAPKPESSTVLSN-ATSEPSMN-LQKAQLSSGLPA 118

Query: 389 DFFDTNETKRQKTGLGTGEKIGTDTLRGSVKSLDAVS-SKTVHGKSKSFASTSVKPL 556
           DFFD + TK+QK+G              +VK LD  S +KT  G S S  + S++PL
Sbjct: 119 DFFDNHVTKKQKSG------------NDAVKFLDPDSYNKT--GGSASAQTQSMEPL 161


>gb|AAN62341.1|AF506028_8 CTV.12 [Citrus trifoliata]
          Length = 344

 Score =  125 bits (313), Expect = 6e-27
 Identities = 82/177 (46%), Positives = 98/177 (55%), Gaps = 7/177 (3%)
 Frame = +2

Query: 38  MDA--RKAAYRAKLKEAAQKRDKRIDSPLVRYNEHDQPICRVCDVVLKSESLWAAHQASR 211
           MDA  +KA +RAKL   AQK++KRI+SPLVRYNE DQP+CRVCDVVLKS+S W AHQASR
Sbjct: 1   MDAARKKAIFRAKLN--AQKKEKRINSPLVRYNEFDQPVCRVCDVVLKSDSQWDAHQASR 58

Query: 212 KHHEAISAYKVKAGQXXXXXXXXXXXXXXXXAGQAQNIRKSEPPVEL-----LPKARPSS 376
           KHHEAI   K  A                         R +   VE+     L KAR SS
Sbjct: 59  KHHEAIKNIKAGATGNNSRMVSDAAKPEAGRESSRSESRSASQNVEIESSAKLGKARTSS 118

Query: 377 TLPADFFDTNETKRQKTGLGTGEKIGTDTLRGSVKSLDAVSSKTVHGKSKSFASTSV 547
            LP++FFD+ E KR KT               SVK +D  S+KT    +K+ A  SV
Sbjct: 119 VLPSNFFDSQEVKRPKT--------------DSVKLVDPDSNKTSGVSAKTQAMKSV 161


>ref|XP_002520372.1| Coiled-coil domain-containing protein, putative [Ricinus communis]
           gi|223540419|gb|EEF41988.1| Coiled-coil
           domain-containing protein, putative [Ricinus communis]
          Length = 375

 Score =  124 bits (311), Expect = 1e-26
 Identities = 73/133 (54%), Positives = 85/133 (63%), Gaps = 7/133 (5%)
 Frame = +2

Query: 38  MDA---RKAAYRAKLKEAAQKRDKRIDSPLVRYNEHDQPICRVCDVVLKSESLWAAHQAS 208
           MDA   +KA +RAKL   AQK+DKRIDSPLVRYNE DQP+CR+C+VVLKSESLWAAHQAS
Sbjct: 1   MDAAAKKKALFRAKLN--AQKKDKRIDSPLVRYNESDQPVCRICNVVLKSESLWAAHQAS 58

Query: 209 RKHHEAISAYKVKAGQXXXXXXXXXXXXXXXXAGQAQNIR----KSEPPVELLPKARPSS 376
           RKHHEAI+  K  AG                      +      KSEP    L K + SS
Sbjct: 59  RKHHEAINNIKNAAGHLRVNSTKPEAHKENTRPKYENDAELHDTKSEPSTR-LTKPQSSS 117

Query: 377 TLPADFFDTNETK 415
            LPADFFDT++T+
Sbjct: 118 VLPADFFDTHKTE 130


>ref|XP_004148048.1| PREDICTED: zinc finger protein 830-like [Cucumis sativus]
           gi|449516880|ref|XP_004165474.1| PREDICTED: zinc finger
           protein 830-like [Cucumis sativus]
          Length = 305

 Score =  120 bits (302), Expect = 1e-25
 Identities = 84/195 (43%), Positives = 103/195 (52%), Gaps = 26/195 (13%)
 Frame = +2

Query: 38  MDA---RKAAYRAKLKEAAQKRDKRIDSPLVRYNEHDQPICRVCDVVLKSESLWAAHQAS 208
           MDA   RKA +RAKL   AQK+DKRIDSPLVRYNE DQP+CRVCD+VLKSE+ W AHQ+S
Sbjct: 1   MDAQAKRKALFRAKLN--AQKKDKRIDSPLVRYNELDQPVCRVCDMVLKSEAYWDAHQSS 58

Query: 209 RKHHEAISAYKVKAGQXXXXXXXXXXXXXXXXAGQA--QNIRKSEPPVEL---------- 352
           R+HHEAI   K  A                  AG++  +NI K+E P EL          
Sbjct: 59  RRHHEAIQNLKASA------------------AGRSGVENI-KAEAPAELPNNRPIDSKE 99

Query: 353 -----------LPKARPSSTLPADFFDTNETKRQKTGLGTGEKIGTDTLRGSVKSLDAVS 499
                      LPK   SS LP+DFFD N  +     L TG+ I TD+  GS+     + 
Sbjct: 100 KKEMTGGTSSELPKRPSSSVLPSDFFDQNAKR-----LKTGKDIETDSRSGSIAQSQVIP 154

Query: 500 SKTVHGKSKSFASTS 544
             +   K  S  + S
Sbjct: 155 KASDLNKKSSMNAGS 169


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