BLASTX nr result

ID: Coptis25_contig00005093 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00005093
         (1048 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279210.1| PREDICTED: CBS domain-containing protein CBS...   151   2e-34
ref|XP_003534522.1| PREDICTED: CBS domain-containing protein CBS...   139   1e-30
ref|XP_003552437.1| PREDICTED: CBS domain-containing protein CBS...   138   3e-30
ref|XP_002512622.1| conserved hypothetical protein [Ricinus comm...   136   7e-30
ref|XP_003624141.1| hypothetical protein MTR_7g079680 [Medicago ...   134   3e-29

>ref|XP_002279210.1| PREDICTED: CBS domain-containing protein CBSX6 [Vitis vinifera]
            gi|297735292|emb|CBI17654.3| unnamed protein product
            [Vitis vinifera]
          Length = 427

 Score =  151 bits (382), Expect = 2e-34
 Identities = 79/98 (80%), Positives = 85/98 (86%), Gaps = 2/98 (2%)
 Frame = +3

Query: 750  GGA--RLRKFSSRSIGFFSSLTSPTIGMGRSMYRGRSAPLTCKVTSSLAAVMAQMLSHRA 923
            GGA  R RKFSSRSIGFFS+  SP+ G  RSMYRGRSAPLTCKVTSSLAAVMAQMLSHRA
Sbjct: 317  GGASTRQRKFSSRSIGFFSNPASPSFGASRSMYRGRSAPLTCKVTSSLAAVMAQMLSHRA 376

Query: 924  THVWVTEAEDEESLVGVVGYADILAAVTRHPATLIPAT 1037
            THVWVTEAE E+ LVGVVGYADILAAV + PA +IP+T
Sbjct: 377  THVWVTEAESEDILVGVVGYADILAAVIKQPAPVIPST 414


>ref|XP_003534522.1| PREDICTED: CBS domain-containing protein CBSX6-like [Glycine max]
          Length = 425

 Score =  139 bits (350), Expect = 1e-30
 Identities = 71/95 (74%), Positives = 80/95 (84%)
 Frame = +3

Query: 750  GGARLRKFSSRSIGFFSSLTSPTIGMGRSMYRGRSAPLTCKVTSSLAAVMAQMLSHRATH 929
            G  + RKFSSRS+GFFS+  S + G  RSMYRGRSAPLTCK+TSSLAAV+AQMLSHRATH
Sbjct: 319  GSRKPRKFSSRSVGFFSNTASHSFG-SRSMYRGRSAPLTCKITSSLAAVLAQMLSHRATH 377

Query: 930  VWVTEAEDEESLVGVVGYADILAAVTRHPATLIPA 1034
            VWVTE E++E LVGVVGYADILAAVT+ P   IPA
Sbjct: 378  VWVTEDENDEVLVGVVGYADILAAVTKPPTAFIPA 412


>ref|XP_003552437.1| PREDICTED: CBS domain-containing protein CBSX6-like [Glycine max]
          Length = 425

 Score =  138 bits (347), Expect = 3e-30
 Identities = 71/95 (74%), Positives = 79/95 (83%)
 Frame = +3

Query: 750  GGARLRKFSSRSIGFFSSLTSPTIGMGRSMYRGRSAPLTCKVTSSLAAVMAQMLSHRATH 929
            G  + RKFSSRS+GFFS+  S      RSMYRGRSAPLTCK+TSSLAAV+AQMLSHRATH
Sbjct: 319  GSRKPRKFSSRSVGFFSNSASHNFS-SRSMYRGRSAPLTCKITSSLAAVLAQMLSHRATH 377

Query: 930  VWVTEAEDEESLVGVVGYADILAAVTRHPATLIPA 1034
            VWVTE E++E LVGVVGYADILAAVT+ P T IPA
Sbjct: 378  VWVTEDENDEVLVGVVGYADILAAVTKPPTTFIPA 412


>ref|XP_002512622.1| conserved hypothetical protein [Ricinus communis]
            gi|223548583|gb|EEF50074.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 432

 Score =  136 bits (343), Expect = 7e-30
 Identities = 70/94 (74%), Positives = 80/94 (85%)
 Frame = +3

Query: 750  GGARLRKFSSRSIGFFSSLTSPTIGMGRSMYRGRSAPLTCKVTSSLAAVMAQMLSHRATH 929
            G  R +KFSS+SIGF     S + G+GRSMYRGRSAPLTCK+TSSLAAVMAQMLSHRATH
Sbjct: 327  GSTRPKKFSSKSIGFNPG--SSSFGIGRSMYRGRSAPLTCKITSSLAAVMAQMLSHRATH 384

Query: 930  VWVTEAEDEESLVGVVGYADILAAVTRHPATLIP 1031
            VWVTEA+++E LVGVVGYADIL AVT+ PA+ IP
Sbjct: 385  VWVTEADNDEVLVGVVGYADILFAVTKPPASFIP 418


>ref|XP_003624141.1| hypothetical protein MTR_7g079680 [Medicago truncatula]
            gi|355499156|gb|AES80359.1| hypothetical protein
            MTR_7g079680 [Medicago truncatula]
          Length = 437

 Score =  134 bits (338), Expect = 3e-29
 Identities = 69/95 (72%), Positives = 79/95 (83%)
 Frame = +3

Query: 750  GGARLRKFSSRSIGFFSSLTSPTIGMGRSMYRGRSAPLTCKVTSSLAAVMAQMLSHRATH 929
            G  +L+KFSSRSIGFFS+  S + G  RSM+RGRS PLTCK+TSSLAAVMAQMLSHRATH
Sbjct: 331  GSRKLKKFSSRSIGFFSNSPSNSFG-SRSMFRGRSTPLTCKMTSSLAAVMAQMLSHRATH 389

Query: 930  VWVTEAEDEESLVGVVGYADILAAVTRHPATLIPA 1034
            VWVTE E+++ LVGVVGYADIL AVT+ P   IPA
Sbjct: 390  VWVTEDENDDVLVGVVGYADILGAVTKPPTIFIPA 424


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