BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00005090
         (1092 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI28171.3| unnamed protein product [Vitis vinifera]              340   5e-91
emb|CAN63504.1| hypothetical protein VITISV_011679 [Vitis vinifera]   318   1e-84
ref|XP_002524463.1| nucleic acid binding protein, putative [Rici...   295   1e-77
ref|XP_003525663.1| PREDICTED: zinc finger CCCH domain-containin...   270   4e-70
ref|XP_003550828.1| PREDICTED: zinc finger CCCH domain-containin...   268   2e-69

>emb|CBI28171.3| unnamed protein product [Vitis vinifera]
          Length = 573

 Score =  340 bits (871), Expect = 5e-91
 Identities = 175/360 (48%), Positives = 239/360 (66%), Gaps = 1/360 (0%)
 Frame = -1

Query: 1077 MDDELTKRNTDCVYFLASPLTCKKGAECEYRHSEIARLNPRDCWYWLAGNCLNPTCAFRH 898
            M+DEL KRNTDCVYFLASPLTCKKG +CEYRHSE ARLNPRDCWYWL+G+CLNP CAFRH
Sbjct: 1    MEDELQKRNTDCVYFLASPLTCKKGMDCEYRHSEGARLNPRDCWYWLSGSCLNPACAFRH 60

Query: 897  PPLEGRSETTLEPESLPAQASAPVIKSNVPCYFYFSSFCNKGENCSFLHGSNINSGQSSK 718
            PPL+G  E + EP +L   +S PV K+N PCYFY++ FCNKGE CSFLHG + ++G  + 
Sbjct: 61   PPLDGHIEASSEPVTLSHHSSVPVNKTNTPCYFYYNGFCNKGERCSFLHGPD-STGTETG 119

Query: 717  SASLVANVHPLENKVVTSINGVTAAIELPHDESQSLTKVVECIQSHSKVECQPSVYNNGL 538
               +    + +E   VT+I                        Q   K + Q  V+ N  
Sbjct: 120  PTLIGRRPNSVETATVTAIE----------------------TQFQPKEDLQKLVFKNAF 157

Query: 537  QKSPSPRIAVPGCDD-LTLKSEFLLPAEGIQSPVPANQSPLCAEHNSDGQFDDHIDPEER 361
            ++S SP+I++   ++   ++S+ LLPAEG       ++S L  + +S+ Q D  I+PEER
Sbjct: 158  EQSSSPQISMSEYEEAAAVRSDSLLPAEGFNQ----SRSLLSTDQSSEEQVDGPIEPEER 213

Query: 360  WESSPGFDVLVDDGSENLGYEDDPEYLLAQKRESRVLHEQLLQYDYEDSVGYDPLEFGDS 181
            WESSPGFDVLVD+ SENL YED+PEYLLA + E R L+ Q L YD+ED V YD L + ++
Sbjct: 214  WESSPGFDVLVDNISENLVYEDEPEYLLALEGEGRELNGQFLGYDFEDPVEYD-LMYPEA 272

Query: 180  GILYEHGMYESYDPLENDNIADQVQRVPKRSREMMLDTMGLPNRQNFPREVDLSVRNGVE 1
             ILY+H +Y+S+D L+N++ +D V+ +P  SRE +LD +    R+NFP E+ ++ R+G++
Sbjct: 273  EILYDHRIYDSFDCLDNEHSSDHVRNIPGCSRERILDPILPRKRKNFPVELAVTGRSGLD 332


>emb|CAN63504.1| hypothetical protein VITISV_011679 [Vitis vinifera]
          Length = 554

 Score =  318 bits (816), Expect = 1e-84
 Identities = 178/386 (46%), Positives = 240/386 (62%), Gaps = 27/386 (6%)
 Frame = -1

Query: 1077 MDDELTKRNTDCVYFLASPLTCKKGAECEYRHSEIARLNPRDCWYWLAGNCLNPTCAFRH 898
            M+DEL KRNTDCVYFLASPLTCKKG +CEYRHSE ARLNPRDCWYWL+G+CLNP CAFRH
Sbjct: 1    MEDELQKRNTDCVYFLASPLTCKKGMDCEYRHSEGARLNPRDCWYWLSGSCLNPACAFRH 60

Query: 897  P-----------------------PLEGRSETTLEPESLPAQASAPVIKSNVPCYFYFSS 787
            P                       PL+G  E + EP +L   +S PV K+N PCYFY++ 
Sbjct: 61   PVRVMLKRIQRDSRSGLLEEKVHLPLDGHIEASSEPVTLSHHSSVPVNKTNTPCYFYYNG 120

Query: 786  FCNKGENCSFLHG--SNINSGQSSKSASLVANVHPLENKVVTSI-NGVTAAIELPHDESQ 616
            FCNKGE CSFLHG  S+  + +S K+AS V ++ P EN  +     G T     P+    
Sbjct: 121  FCNKGERCSFLHGPDSSAPAWKSLKTASEVNDMRPPENNXIAGTETGPTLIGRRPNSVET 180

Query: 615  SLTKVVECIQSHSKVECQPSVYNNGLQKSPSPRIAVPGCDD-LTLKSEFLLPAEGIQSPV 439
            +    +E  Q   K + Q  V+ N  ++S SP+I++   ++   ++S+ LLPAEG     
Sbjct: 181  ATVTAIE-TQFQPKEDLQKLVFKNAFEQSSSPQISMSEYEEAAAVRSDSLLPAEGFNQ-- 237

Query: 438  PANQSPLCAEHNSDGQFDDHIDPEERWESSPGFDVLVDDGSENLGYEDDPEYLLAQKRES 259
              ++S L  + +S+ Q D  I+PEERWESSPGFDVLVD+ SENL YED+PEYLLA + E 
Sbjct: 238  --SRSLLSTDQSSEEQVDGPIEPEERWESSPGFDVLVDNISENLVYEDEPEYLLALEGEG 295

Query: 258  RVLHEQLLQYDYEDSVGYDPLEFGDSGILYEHGMYESYDPLENDNIADQVQRVPKRSREM 79
            R L+ Q L YD+ED V YD L + ++ ILY+H +Y+S+D L+N++          R    
Sbjct: 296  RELNGQFLGYDFEDPVEYD-LMYPEAEILYDHRIYDSFDCLDNEH----------RREFW 344

Query: 78   MLDTMGLPNRQNFPREVDLSVRNGVE 1
            +L   G   R+NFP E+ ++ R+G++
Sbjct: 345  ILFCPG--KRKNFPVELAVTGRSGLD 368


>ref|XP_002524463.1| nucleic acid binding protein, putative [Ricinus communis]
            gi|223536251|gb|EEF37903.1| nucleic acid binding protein,
            putative [Ricinus communis]
          Length = 530

 Score =  295 bits (755), Expect = 1e-77
 Identities = 159/356 (44%), Positives = 218/356 (61%), Gaps = 3/356 (0%)
 Frame = -1

Query: 1077 MDDELTKRNTDCVYFLASPLTCKKGAECEYRHSEIARLNPRDCWYWLAGNCLNPTCAFRH 898
            M++++ KRNTDCVYFLASPLTCKKG ECEYRH+EIARLNPRDCWYWLAG+C NPTCAFRH
Sbjct: 3    MEEDIQKRNTDCVYFLASPLTCKKGLECEYRHNEIARLNPRDCWYWLAGDCYNPTCAFRH 62

Query: 897  PPLEGRSETTLEPESLPAQASAPVIKSNVPCYFYFSSFCNKGENCSFLHGSNINS--GQS 724
            PPLE  +E   E  S    +S P  K+NVPCYF+F+ FCNKG+ C F+HG   NS  G+S
Sbjct: 63   PPLEMHAEGPPELSS----SSVPANKTNVPCYFFFNGFCNKGDRCFFMHGPEANSFTGKS 118

Query: 723  SKSASLVANVHPLENKVVTSINGVTAAIELPHDESQSLTKVVECIQSHSKVECQPSVYNN 544
              ++S +    PL++K+    + V+A  E+  + S++  K V+ ++     + Q      
Sbjct: 119  GSTSSAIKENIPLDSKISGGNDTVSAPTEVNANPSETAAKAVKDLKLQPYEDFQFPAPEK 178

Query: 543  GLQKSPSPRIAVPGCDD-LTLKSEFLLPAEGIQSPVPANQSPLCAEHNSDGQFDDHIDPE 367
             + +SPSP+IAV   ++ + L   FLL           ++S      + + + DDH++PE
Sbjct: 179  TVMRSPSPQIAVSQSEEAVILNPSFLLKVNSFTE----SRSLAYTTQSPEEEMDDHVEPE 234

Query: 366  ERWESSPGFDVLVDDGSENLGYEDDPEYLLAQKRESRVLHEQLLQYDYEDSVGYDPLEFG 187
            ERWESSPGFDVLVDD SENL YEDD EYLL    E R  +   L YD+E+ V YD   + 
Sbjct: 235  ERWESSPGFDVLVDDKSENLDYEDDQEYLLPLDMEQRDPNNCFLGYDFENLVEYDH-AYH 293

Query: 186  DSGILYEHGMYESYDPLENDNIADQVQRVPKRSREMMLDTMGLPNRQNFPREVDLS 19
            D+   Y  G Y++ D  +N +I D V      SR  + D++    R+    E+ ++
Sbjct: 294  DAEDDYGSGKYDNTDFADNVHIFDDVGNDSGLSRNSVTDSLLSQKRKLVAMELSIN 349


>ref|XP_003525663.1| PREDICTED: zinc finger CCCH domain-containing protein 34-like
            [Glycine max]
          Length = 524

 Score =  270 bits (691), Expect = 4e-70
 Identities = 149/342 (43%), Positives = 206/342 (60%), Gaps = 6/342 (1%)
 Frame = -1

Query: 1077 MDDELTKRNTDCVYFLASPLTCKKGAECEYRHSEIARLNPRDCWYWLAGNCLNPTCAFRH 898
            MD +  KR TDCVYFLASPLTCKKGAECEYRH+EIARLNPRDCWYWL+G CLNPTCAFRH
Sbjct: 1    MDQDSLKRYTDCVYFLASPLTCKKGAECEYRHNEIARLNPRDCWYWLSGQCLNPTCAFRH 60

Query: 897  PPLEGRSETTLEPESLPAQASAPVIKSNVPCYFYFSSFCNKGENCSFLHG--SNINSGQS 724
            PPL+G +  ++  E  P Q S P  K+ VPCYF+F+  CNKG+ CSFLHG   +I + + 
Sbjct: 61   PPLDGHTGASVPSE--PTQTSLPANKTMVPCYFFFNGSCNKGDRCSFLHGPDDSIFTVKP 118

Query: 723  SKSASLVANVHPLENKVVTSINGVTAAIELPHDESQSLTKVVECIQSHSKVECQPSVYNN 544
             K+ +   +   LENK  TS       +  P D+S +  K +  ++   K + Q  +  +
Sbjct: 119  VKNDNGSTDALNLENK--TSSGNRIGLVSTPTDQSVAAPKNLSDLKLQPKEDHQLEIPKD 176

Query: 543  GLQKSPSPRIAVPGCDDLTL-KSEFLLPAEGIQSPVPANQSPLCAEHNSDGQFDDHIDPE 367
              Q+     ++     +  + +S+  +P +G    VP     LC E +S+ Q + HI+PE
Sbjct: 177  VKQQGYYLELSASEYKEAAVSRSDSSIPDDGFVHNVP----HLCTEQSSEEQVNSHIEPE 232

Query: 366  ERWES---SPGFDVLVDDGSENLGYEDDPEYLLAQKRESRVLHEQLLQYDYEDSVGYDPL 196
            ERWES   SPGFDVLV D  +NLGYE+D EY+    R+ + L +Q   Y+++DSV YD +
Sbjct: 233  ERWESSPHSPGFDVLVHDEVDNLGYEEDSEYVTVGDRDEQELDDQYFGYEFKDSVEYDTI 292

Query: 195  EFGDSGILYEHGMYESYDPLENDNIADQVQRVPKRSREMMLD 70
               ++ ILYE   Y+ Y  L+   I    + +    R++ LD
Sbjct: 293  -CPEADILYEQETYDGYRFLDRGLIHANGRTIHAYPRDVFLD 333


>ref|XP_003550828.1| PREDICTED: zinc finger CCCH domain-containing protein 34-like
            [Glycine max]
          Length = 526

 Score =  268 bits (685), Expect = 2e-69
 Identities = 152/343 (44%), Positives = 207/343 (60%), Gaps = 7/343 (2%)
 Frame = -1

Query: 1077 MDDELTKRNTDCVYFLASPLTCKKGAECEYRHSEIARLNPRDCWYWLAGNCLNPTCAFRH 898
            MD++  KR TDCVYFLASPLTCKKGAECEYRH+EIARLNPRDCWYWL+G CLNPTCAFRH
Sbjct: 1    MDEDSLKRYTDCVYFLASPLTCKKGAECEYRHNEIARLNPRDCWYWLSGQCLNPTCAFRH 60

Query: 897  PPLEGRSETTLEPESLPAQASAPVIKSNVPCYFYFSSFCNKGENCSFLHG--SNINSGQS 724
            PPL+G +   +  E  P Q S P  K+ VPCYF+F+ FCNKG+ CSFLHG   +I + + 
Sbjct: 61   PPLDGHTGAPVPSE--PTQTSLPANKTLVPCYFFFNGFCNKGDRCSFLHGPDDSIFNIKP 118

Query: 723  SKSASLVANVHPLENKVVT-SINGVTAAIELPHDESQSLTKVVECIQSHSKVECQPSVYN 547
             K+ +   +   LENK  + +  GVT+    P D S +  K +  ++   K + Q  +  
Sbjct: 119  VKNENGSTDALNLENKAPSGNRTGVTST---PTDRSVAAPKNLSDLKHQPKEDHQLELPK 175

Query: 546  NGLQKSPSPRIAVPGCDDLTL-KSEFLLPAEGIQSPVPANQSPLCAEHNSDGQFDDHIDP 370
            N  Q+     ++     +  + +S+  +P +G    VP     LC   +S+ Q + HI+P
Sbjct: 176  NVKQQGDYLELSASEYKEAAVSRSDSSIPDDGFVHNVP----HLCTGQSSEEQVNSHIEP 231

Query: 369  EERWES---SPGFDVLVDDGSENLGYEDDPEYLLAQKRESRVLHEQLLQYDYEDSVGYDP 199
            EE WES   SPGFDVLV D  ENLGYE+D EYL    R+ + L++Q  +Y++ D V YD 
Sbjct: 232  EEWWESSPHSPGFDVLVHDEVENLGYEEDSEYLPVVDRDEQELNDQYFRYEFIDPVEYDT 291

Query: 198  LEFGDSGILYEHGMYESYDPLENDNIADQVQRVPKRSREMMLD 70
            +   ++ ILYE   Y+ Y  L+ D I    + V   + +  LD
Sbjct: 292  I-CPEADILYEQETYDGYRCLDRDLIHVNGRTVHAYATDAFLD 333