BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00005088
         (1151 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275179.1| PREDICTED: uncharacterized protein LOC100266...   452   e-125
ref|XP_003524834.1| PREDICTED: uncharacterized protein LOC100811...   441   e-121
gb|ACU20793.1| unknown [Glycine max]                                  439   e-121
gb|AAM61605.1| unknown [Arabidopsis thaliana]                         439   e-121
ref|NP_027422.1| tobamovirus multiplication protein 3 [Arabidops...   439   e-121

>ref|XP_002275179.1| PREDICTED: uncharacterized protein LOC100266794 isoform 1 [Vitis
            vinifera] gi|297738282|emb|CBI27483.3| unnamed protein
            product [Vitis vinifera]
          Length = 290

 Score =  452 bits (1164), Expect = e-125
 Identities = 219/283 (77%), Positives = 241/283 (85%)
 Frame = +2

Query: 191  SSSVMAYGLTNASDWWNEVNNSPVWQNHIFHTLAALYGFVALVALIQLVRIEIRVPEYGW 370
            +S+V AY +T AS+WW EVN S VWQ+ IFH LAALYG VA VAL+QLVRI++RVPEYGW
Sbjct: 8    ASAVSAYAITQASNWWEEVNRSIVWQDRIFHVLAALYGIVAAVALVQLVRIQLRVPEYGW 67

Query: 371  TTQKVFHFLNFVVNAVRSLVFVFRRNVQGLEPEIVRHILLDMPSLVFFTTYALLVLFWAE 550
            TTQKVFHFLNF+VN VRSLVFVFRRNVQ L PEI++HILLDMPSL FFTTYALLVLFWAE
Sbjct: 68   TTQKVFHFLNFLVNGVRSLVFVFRRNVQRLHPEIIQHILLDMPSLAFFTTYALLVLFWAE 127

Query: 551  IYYQARAVSTDGLRPGFFTINAVVYAIQIALWLFLWWKPTPAVLTLSKIFFAAVSXXXXX 730
            IYYQARAVSTDGLRP F+TINAVVYAIQIA+W  LWWKP P V  LSK+FFA VS     
Sbjct: 128  IYYQARAVSTDGLRPSFYTINAVVYAIQIAMWFVLWWKPIPIVFILSKMFFAGVSLFAAL 187

Query: 731  XXXXXXXXXXXXXQRFPVESKGRRKKLQEVGYVTTICFTCFLLRCVMMFFNAFDKAADLD 910
                         QRFPVESKGRRKKLQEVGYVTTICF+CFL+RC+MM FNAFD+AA+LD
Sbjct: 188  GFLLYGGRLFLMLQRFPVESKGRRKKLQEVGYVTTICFSCFLVRCIMMCFNAFDQAANLD 247

Query: 911  VLNHPVLNFLYYLLVEILPSCLVLFILRKLPPKRGITQYHPIR 1039
            VL+HP+LNF+YYLLVEILPS LVLFILRKLPPKRGITQYHPIR
Sbjct: 248  VLDHPILNFIYYLLVEILPSSLVLFILRKLPPKRGITQYHPIR 290


>ref|XP_003524834.1| PREDICTED: uncharacterized protein LOC100811134 [Glycine max]
          Length = 293

 Score =  441 bits (1134), Expect = e-121
 Identities = 212/281 (75%), Positives = 235/281 (83%)
 Frame = +2

Query: 197  SVMAYGLTNASDWWNEVNNSPVWQNHIFHTLAALYGFVALVALIQLVRIEIRVPEYGWTT 376
            +V A  LT +S+WW ++N SP+WQ+ IFH LA LYG VA VAL+QLVRI++RVPEYGWTT
Sbjct: 13   AVAALDLTESSNWWRDINRSPLWQDRIFHLLAILYGIVAAVALVQLVRIQLRVPEYGWTT 72

Query: 377  QKVFHFLNFVVNAVRSLVFVFRRNVQGLEPEIVRHILLDMPSLVFFTTYALLVLFWAEIY 556
            QKVFHFLNF+VN VR  VFVFRR+VQ L+PEIV+HILLDMPSL FFTTYALLVLFWAEIY
Sbjct: 73   QKVFHFLNFIVNGVRCFVFVFRRDVQKLQPEIVQHILLDMPSLAFFTTYALLVLFWAEIY 132

Query: 557  YQARAVSTDGLRPGFFTINAVVYAIQIALWLFLWWKPTPAVLTLSKIFFAAVSXXXXXXX 736
            YQARAVSTDGLRP F+TINAVVY IQI LWL LWWKP   ++ LSK+FFA VS       
Sbjct: 133  YQARAVSTDGLRPSFYTINAVVYVIQITLWLILWWKPISVLVILSKMFFAGVSLFAALGF 192

Query: 737  XXXXXXXXXXXQRFPVESKGRRKKLQEVGYVTTICFTCFLLRCVMMFFNAFDKAADLDVL 916
                       QRFPVESKGRRKKLQEVGYVTTICF+CFL+RCVMM FNAFDKAADLDVL
Sbjct: 193  LLYGGRLFLMLQRFPVESKGRRKKLQEVGYVTTICFSCFLIRCVMMCFNAFDKAADLDVL 252

Query: 917  NHPVLNFLYYLLVEILPSCLVLFILRKLPPKRGITQYHPIR 1039
            +HP+LNF+YYL VEILPS LVLFILRKLPPKRGITQYHPIR
Sbjct: 253  DHPILNFIYYLFVEILPSTLVLFILRKLPPKRGITQYHPIR 293


>gb|ACU20793.1| unknown [Glycine max]
          Length = 293

 Score =  439 bits (1129), Expect = e-121
 Identities = 211/281 (75%), Positives = 235/281 (83%)
 Frame = +2

Query: 197  SVMAYGLTNASDWWNEVNNSPVWQNHIFHTLAALYGFVALVALIQLVRIEIRVPEYGWTT 376
            +V A  LT +S+WW +++ SP+WQ+ IFH LA LYG VA VAL+QLVRI++RVPEYGWTT
Sbjct: 13   AVAALDLTESSNWWRDIDRSPLWQDRIFHLLAILYGIVAAVALVQLVRIQLRVPEYGWTT 72

Query: 377  QKVFHFLNFVVNAVRSLVFVFRRNVQGLEPEIVRHILLDMPSLVFFTTYALLVLFWAEIY 556
            QKVFHFLNF+VN VR  VFVFRR+VQ L+PEIV+HILLDMPSL FFTTYALLVLFWAEIY
Sbjct: 73   QKVFHFLNFIVNGVRCFVFVFRRDVQKLQPEIVQHILLDMPSLAFFTTYALLVLFWAEIY 132

Query: 557  YQARAVSTDGLRPGFFTINAVVYAIQIALWLFLWWKPTPAVLTLSKIFFAAVSXXXXXXX 736
            YQARAVSTDGLRP F+TINAVVY IQI LWL LWWKP   ++ LSK+FFA VS       
Sbjct: 133  YQARAVSTDGLRPSFYTINAVVYVIQITLWLILWWKPISVLVILSKMFFAGVSLFAALGF 192

Query: 737  XXXXXXXXXXXQRFPVESKGRRKKLQEVGYVTTICFTCFLLRCVMMFFNAFDKAADLDVL 916
                       QRFPVESKGRRKKLQEVGYVTTICF+CFL+RCVMM FNAFDKAADLDVL
Sbjct: 193  LLYGGRLFLMLQRFPVESKGRRKKLQEVGYVTTICFSCFLIRCVMMCFNAFDKAADLDVL 252

Query: 917  NHPVLNFLYYLLVEILPSCLVLFILRKLPPKRGITQYHPIR 1039
            +HP+LNF+YYL VEILPS LVLFILRKLPPKRGITQYHPIR
Sbjct: 253  DHPILNFIYYLFVEILPSTLVLFILRKLPPKRGITQYHPIR 293


>gb|AAM61605.1| unknown [Arabidopsis thaliana]
          Length = 288

 Score =  439 bits (1129), Expect = e-121
 Identities = 212/288 (73%), Positives = 240/288 (83%)
 Frame = +2

Query: 176  MDSPPSSSVMAYGLTNASDWWNEVNNSPVWQNHIFHTLAALYGFVALVALIQLVRIEIRV 355
            M S  SS+V    L  AS+WW++VN SP+WQ+ IFH LA LYG V+LVA+IQLVRI++RV
Sbjct: 1    MSSSSSSAVEMLNLKEASNWWSDVNESPIWQDRIFHVLAVLYGIVSLVAVIQLVRIQLRV 60

Query: 356  PEYGWTTQKVFHFLNFVVNAVRSLVFVFRRNVQGLEPEIVRHILLDMPSLVFFTTYALLV 535
            PEYGWTTQKVFHFLNFVVN VR++VFVFRRNVQ ++PEI++HILLD+PSL FFTTYALLV
Sbjct: 61   PEYGWTTQKVFHFLNFVVNGVRAVVFVFRRNVQFMQPEILQHILLDIPSLAFFTTYALLV 120

Query: 536  LFWAEIYYQARAVSTDGLRPGFFTINAVVYAIQIALWLFLWWKPTPAVLTLSKIFFAAVS 715
            LFWAEIYYQARAVSTDGLRP FFTINAVVY +QIALWL LWWKP   ++ LSK+FFA VS
Sbjct: 121  LFWAEIYYQARAVSTDGLRPSFFTINAVVYVVQIALWLVLWWKPVRVMVILSKMFFAGVS 180

Query: 716  XXXXXXXXXXXXXXXXXXQRFPVESKGRRKKLQEVGYVTTICFTCFLLRCVMMFFNAFDK 895
                              QRFPVESKGRRKKLQEVGYVTTICFTCFL+RC+MM F AFD+
Sbjct: 181  LFAALGFLLYGRRLFLMLQRFPVESKGRRKKLQEVGYVTTICFTCFLIRCIMMCFAAFDE 240

Query: 896  AADLDVLNHPVLNFLYYLLVEILPSCLVLFILRKLPPKRGITQYHPIR 1039
             A+LDVL+HP+LNF+YYLLVEILPS LVLFILRKLPPKRGITQYH IR
Sbjct: 241  GANLDVLDHPILNFIYYLLVEILPSSLVLFILRKLPPKRGITQYHQIR 288


>ref|NP_027422.1| tobamovirus multiplication protein 3 [Arabidopsis thaliana]
            gi|15425641|dbj|BAB64308.1| TOM3 [Arabidopsis thaliana]
            gi|20197487|gb|AAC97216.2| expressed protein [Arabidopsis
            thaliana] gi|26449544|dbj|BAC41898.1| unknown protein
            [Arabidopsis thaliana] gi|330250463|gb|AEC05557.1|
            tobamovirus multiplication protein 3 [Arabidopsis
            thaliana]
          Length = 303

 Score =  439 bits (1129), Expect = e-121
 Identities = 212/288 (73%), Positives = 240/288 (83%)
 Frame = +2

Query: 176  MDSPPSSSVMAYGLTNASDWWNEVNNSPVWQNHIFHTLAALYGFVALVALIQLVRIEIRV 355
            M S  SS+V    L  AS+WW++VN SP+WQ+ IFH LA LYG V+LVA+IQLVRI++RV
Sbjct: 16   MSSSSSSAVEMLNLKEASNWWSDVNESPIWQDRIFHVLAVLYGIVSLVAVIQLVRIQLRV 75

Query: 356  PEYGWTTQKVFHFLNFVVNAVRSLVFVFRRNVQGLEPEIVRHILLDMPSLVFFTTYALLV 535
            PEYGWTTQKVFHFLNFVVN VR++VFVFRRNVQ ++PEI++HILLD+PSL FFTTYALLV
Sbjct: 76   PEYGWTTQKVFHFLNFVVNGVRAVVFVFRRNVQFMQPEILQHILLDIPSLAFFTTYALLV 135

Query: 536  LFWAEIYYQARAVSTDGLRPGFFTINAVVYAIQIALWLFLWWKPTPAVLTLSKIFFAAVS 715
            LFWAEIYYQARAVSTDGLRP FFTINAVVY +QIALWL LWWKP   ++ LSK+FFA VS
Sbjct: 136  LFWAEIYYQARAVSTDGLRPSFFTINAVVYVVQIALWLVLWWKPVRVMVILSKMFFAGVS 195

Query: 716  XXXXXXXXXXXXXXXXXXQRFPVESKGRRKKLQEVGYVTTICFTCFLLRCVMMFFNAFDK 895
                              QRFPVESKGRRKKLQEVGYVTTICFTCFL+RC+MM F AFD+
Sbjct: 196  LFAALGFLLYGGRLFLMLQRFPVESKGRRKKLQEVGYVTTICFTCFLIRCIMMCFAAFDE 255

Query: 896  AADLDVLNHPVLNFLYYLLVEILPSCLVLFILRKLPPKRGITQYHPIR 1039
             A+LDVL+HP+LNF+YYLLVEILPS LVLFILRKLPPKRGITQYH IR
Sbjct: 256  GANLDVLDHPILNFIYYLLVEILPSSLVLFILRKLPPKRGITQYHQIR 303