BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00005081
         (2337 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003636168.1| Heterogeneous nuclear ribonucleoprotein Q [M...   308   4e-81
ref|XP_002270340.2| PREDICTED: uncharacterized protein LOC100232...   307   7e-81
ref|XP_002526479.1| RNA binding protein, putative [Ricinus commu...   306   2e-80
dbj|BAK02672.1| predicted protein [Hordeum vulgare subsp. vulgare]    300   9e-79
ref|XP_002302501.1| predicted protein [Populus trichocarpa] gi|2...   299   2e-78

>ref|XP_003636168.1| Heterogeneous nuclear ribonucleoprotein Q [Medicago truncatula]
            gi|355502103|gb|AES83306.1| Heterogeneous nuclear
            ribonucleoprotein Q [Medicago truncatula]
          Length = 824

 Score =  308 bits (789), Expect = 4e-81
 Identities = 218/559 (38%), Positives = 289/559 (51%), Gaps = 42/559 (7%)
 Frame = +2

Query: 146  QKEYEVFVGGLDRDADEEDLRKVFKNMGEIVEVRLVKNKFSQKNKGFAFVRFATVEQAKR 325
            +KE+EVFVGGLD+DA E+DLRKVF  +G + EVRL+ N  ++KNKGFAF+RF  VEQAKR
Sbjct: 212  RKEFEVFVGGLDKDATEDDLRKVFSEVGVVTEVRLMMNPQTKKNKGFAFLRFENVEQAKR 271

Query: 326  AAAELNYTQVRGKVCEVTRNNDNETLHLGNVCTTWTKDTLVEKLQPYELENLEDVHVIED 505
            A AEL    + GK C VT + D++TL+LGN+C TWTK+ L EKL+ Y + N+ED+ ++ED
Sbjct: 272  AVAELKNPVINGKQCGVTPSQDSDTLYLGNICKTWTKEALKEKLKHYGVTNVEDITLVED 331

Query: 506  PKDRKRNRGYAFLNFSTHMDAVAACNKLQKGSLYLGTTVRADVAFAKSAVEPDEQIMSQV 685
              D+  NRG+AFL FS+  DA+ A  +LQK  +  G    A V+FA S ++P ++IMSQV
Sbjct: 332  SNDKGTNRGFAFLEFSSRSDAMDAFKRLQKRDVTFGVDKPAKVSFADSFIDPGDEIMSQV 391

Query: 686  KSVFLDGLPASWDESQVQKQFQKYGEIEHVQLARNMPSAKRKDFGFVYFRTREAALTCID 865
            K+VF+D LP SWDE  V+   +KYGE+E ++LARNMP+A+RKD+GFV F + +AA+ C D
Sbjct: 392  KTVFIDALPPSWDEDYVRNLLKKYGEVEKIELARNMPAARRKDYGFVTFGSHDAAIRCAD 451

Query: 866  AVNKDGIGD-VRKVFLRATLKRPLQRRVPSAVGGW-----RGYDTDDYNGWSTRPS---- 1015
            ++    +G+  +K  +RA L RPLQR     VG       RG        WS+RP+    
Sbjct: 452  SITGTELGEGDKKAKVRARLSRPLQRGRGKHVGRGDYRPSRGSAIMSRPSWSSRPAPRSF 511

Query: 1016 ------GIG------RSYSNRENREVESFGRGHSPDHRIPGYNRYSTRGAVLETATSPV- 1156
                  GIG      RS S R+ R V S      P    P    Y  R A    + S V 
Sbjct: 512  SSRGVRGIGSRAPPIRSISARDRRPVMSIPVRSRP--LPPPARSYDRRPADAAYSKSSVK 569

Query: 1157 -------DIYGGRSR----YSNRTSFETRYTPVEEYSSQFRRGSVRQAPTSATSHSRPRA 1303
                   D+   RSR    Y +R + E R T    Y     RGS    P  +T+ + PR 
Sbjct: 570  RDYGRRDDLPPPRSRVAVDYGSRMTSERRPT----YRDYPPRGSDYSDPPRSTARAAPRR 625

Query: 1304 PYFEXXXXXXXXXXNYEDFPVTYSRSHVPSRGEXXXXXXXXXXXXXENNSVDTYDYPTPS 1483
             Y +           YE  P     SH PS  E                     DY + S
Sbjct: 626  GYVD-----DGYSQRYERPPPPPPPSH-PSYREGRPR-----------------DYDSLS 662

Query: 1484 RLKRPYSAVDD--------DRIVSRPLTRRSRSGGVDRDMGSYPVRVFSSFEEYSRSTQD 1639
              KR Y+AVDD            SR        G   +   +Y  RV  S   Y   ++ 
Sbjct: 663  GSKRSYAAVDDVPPRYADTGARQSRARLEYDYGGSASQYGDAYGDRVGRSSLGYGSGSRS 722

Query: 1640 VHHGYDSVGHERRYSSGRG 1696
               G DS G    YSS +G
Sbjct: 723  SISGQDSHG---VYSSRQG 738


>ref|XP_002270340.2| PREDICTED: uncharacterized protein LOC100232913 [Vitis vinifera]
            gi|297734640|emb|CBI16691.3| unnamed protein product
            [Vitis vinifera]
          Length = 812

 Score =  307 bits (787), Expect = 7e-81
 Identities = 215/559 (38%), Positives = 284/559 (50%), Gaps = 54/559 (9%)
 Frame = +2

Query: 146  QKEYEVFVGGLDRDADEEDLRKVFKNMGEIVEVRLVKNKFSQKNKGFAFVRFATVEQAKR 325
            +KE+EVFVGGLD+DA E+DLRKVF  +GE+ EVRL+ N  ++KNKGFAF+RFATVEQAKR
Sbjct: 229  RKEFEVFVGGLDKDATEDDLRKVFSQVGEVTEVRLMMNPQTKKNKGFAFLRFATVEQAKR 288

Query: 326  AAAELNYTQVRGKVCEVTRNNDNETLHLGNVCTTWTKDTLVEKLQPYELENLEDVHVIED 505
            A  EL    V GK C VT + D++TL LGN+C TWTK+ L EKL+ Y +EN+ED+ ++ED
Sbjct: 289  AVTELKNPVVNGKQCGVTPSQDSDTLFLGNICKTWTKEALKEKLKHYGVENVEDLTLVED 348

Query: 506  PKDRKRNRGYAFLNFSTHMDAVAACNKLQKGSLYLGTTVRADVAFAKSAVEPDEQIMSQV 685
              +   NRG+AFL FS+  DA+ A  +LQK  +  G    A V+FA S ++P ++IM+QV
Sbjct: 349  SNNEGMNRGFAFLEFSSRSDAMDAFKRLQKRDVVFGVDRTAKVSFADSFIDPGDEIMAQV 408

Query: 686  KSVFLDGLPASWDESQVQKQFQKYGEIEHVQLARNMPSAKRKDFGFVYFRTREAALTCID 865
            K+VF+DGLPASWDE +V++  +KYGEIE ++LARNMPSAKRKDFGFV F T +AA+TC  
Sbjct: 409  KTVFIDGLPASWDEDRVRELLKKYGEIEKIELARNMPSAKRKDFGFVTFDTHDAAVTCAK 468

Query: 866  AVNKDGIGD-VRKVFLRATLKRPLQR-----------------RVPSAVGGWRGYDTDDY 991
            ++N   +G+   K  +RA L RPLQR                  V    G W       +
Sbjct: 469  SINNAELGEGENKAKVRARLSRPLQRGKGKHISRGDFRPGRGGPVRGVRGSWARPALRSF 528

Query: 992  NGWSTR-------PSGIGRSYSNRENREVESF---GRGHSPDHR-------IPGYNR--- 1111
             G   R       P+ + R    R+ R V +    GR   P  R       +P Y +   
Sbjct: 529  PGRGARGLGPRLPPAAVKRPIGFRDRRPVMAMPPRGRPLPPPSRSYDRRAPVPAYPKPNL 588

Query: 1112 ---YSTRGAVLETATSPVDIYGGRSRYSNRTSFETRYTPVEEYSSQFRRGSVRQAPTSAT 1282
               Y  R  V   +   VD YG R     R S+   Y           RGS        T
Sbjct: 589  KRDYGRREEVPLRSRPAVD-YGSRVAPERRPSYRDDYA---------TRGSGYSDIPRNT 638

Query: 1283 SHSRPRAPYFEXXXXXXXXXXNYEDFPVTYSRSHVPSRGEXXXXXXXXXXXXXENNSVDT 1462
            S +  R  Y +            + +   + R   PS  E                    
Sbjct: 639  SRTAARRTYED------------DAYGQRFERPPPPSYREGRPR---------------- 670

Query: 1463 YDYPTPSRLKRPYSAVDD------DRIV--SRPLTRRSRSGGVDRDMGSYPVRVFSSFEE 1618
             DY + +  KRPY A+DD      D  V  SR       S G  +   +Y  R+  S   
Sbjct: 671  -DYDSIAGSKRPYGALDDVPPRYADASVRQSRARLDYEMSAGASQYGDAYGDRLGRSNLG 729

Query: 1619 Y-----SRSTQDVHHGYDS 1660
            Y     S S+QD H  Y S
Sbjct: 730  YGGSRSSMSSQDSHGLYSS 748


>ref|XP_002526479.1| RNA binding protein, putative [Ricinus communis]
            gi|223534154|gb|EEF35870.1| RNA binding protein, putative
            [Ricinus communis]
          Length = 784

 Score =  306 bits (784), Expect = 2e-80
 Identities = 207/551 (37%), Positives = 283/551 (51%), Gaps = 46/551 (8%)
 Frame = +2

Query: 146  QKEYEVFVGGLDRDADEEDLRKVFKNMGEIVEVRLVKNKFSQKNKGFAFVRFATVEQAKR 325
            +KE+EVFVGGLD+DA E+DLRKVF  +GE+ EVRL+ N  ++KNKGFAF+RF+TVEQAK+
Sbjct: 210  RKEFEVFVGGLDKDATEDDLRKVFTRVGEVTEVRLMMNPQTKKNKGFAFLRFSTVEQAKK 269

Query: 326  AAAELNYTQVRGKVCEVTRNNDNETLHLGNVCTTWTKDTLVEKLQPYELENLEDVHVIED 505
            A  EL    + GK C VT + D++TL LGN+C TWTK+ L EKL+ Y +EN+EDV ++ED
Sbjct: 270  AVTELKNPVINGKQCGVTPSQDSDTLFLGNICKTWTKEALKEKLKHYGVENVEDVTLVED 329

Query: 506  PKDRKRNRGYAFLNFSTHMDAVAACNKLQKGSLYLGTTVRADVAFAKSAVEPDEQIMSQV 685
              +   NRG+AFL FS+  DA+ A  +LQK  +  G    A V+FA S ++P ++IM+QV
Sbjct: 330  SNNEGMNRGFAFLEFSSRSDAMDAFKRLQKRDVLFGVDRPAKVSFADSFIDPGDEIMAQV 389

Query: 686  KSVFLDGLPASWDESQVQKQFQKYGEIEHVQLARNMPSAKRKDFGFVYFRTREAALTCID 865
            K+VF+DGLPASWDE +V++  +K+GEIE ++LARNMPSAKRKDFGFV F + +AA+TC  
Sbjct: 390  KTVFVDGLPASWDEDRVRELLKKFGEIEKIELARNMPSAKRKDFGFVTFDSHDAAVTCAK 449

Query: 866  AVNKDGIGD-VRKVFLRATLKRPLQRRVPSAVGGWRGYDTDDYNGW-------------- 1000
            ++N   +G+   K  +RA L RPLQR      G  +     D+  W              
Sbjct: 450  SINNAELGEGDNKAKVRARLSRPLQR------GKGKHASRADFRSWYGGRTARGPWVRPV 503

Query: 1001 -----STRPSGIGRSYSNRENR----EVESFGRGHSPDHR-------IPGYNRYSTRGAV 1132
                    P+ + R    R+ R     +   GR   P +R        P Y + S +   
Sbjct: 504  RGIASRAAPTSVKRHVGLRDRRPPVMSMPVRGRPLPPPNRTYDRRAPAPSYPKSSLKRDY 563

Query: 1133 LETATSPVDIYGGRSRYSNRTSFETRYTPVEEYSSQFRRGSVRQAPTSATSHSRPRAPYF 1312
                  P         YS+R+  E R +  ++YSS   RGS        TS S  R  Y 
Sbjct: 564  GRREELPPPRSRAPVDYSSRSVAERRQSYRDDYSS---RGSGYSDIPRGTSRSSARRAYV 620

Query: 1313 EXXXXXXXXXXNYEDFPVTYSRSHVPSRGEXXXXXXXXXXXXXENNSVDTYDYPTPSRLK 1492
            +            E  P +Y                               DY + S  K
Sbjct: 621  D-----DGYGQRLERHPPSYREGR-------------------------ARDYDSISGSK 650

Query: 1493 RPYSAVDD--DRIVSRPLTRRSRSGGVDRDMG--------SYPVRVFSSFEEY-----SR 1627
            RPYSA+DD   R        R     +D ++G        +Y  R+  S   Y     S 
Sbjct: 651  RPYSAMDDVPPRYADGGAGTRHSRARLDYELGPSASQYGDAYGDRIGRSSVGYGGSRSSL 710

Query: 1628 STQDVHHGYDS 1660
            S+QD H  Y S
Sbjct: 711  SSQDSHGLYTS 721


>dbj|BAK02672.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 682

 Score =  300 bits (769), Expect = 9e-79
 Identities = 175/379 (46%), Positives = 236/379 (62%), Gaps = 3/379 (0%)
 Frame = +2

Query: 146  QKEYEVFVGGLDRDADEEDLRKVFKNMGEIVEVRLVKNKFS-QKNKGFAFVRFATVEQAK 322
            +KEYEVFV GL R+A E+D+       GE+ EVRLV++    Q NKGFAF RFA V QA+
Sbjct: 99   RKEYEVFVFGLPREAMEDDVAAALTEAGEVEEVRLVRDPAQPQLNKGFAFARFAEVWQAR 158

Query: 323  RAAAELNYTQVRGKVCEVTRNNDNETLHLGNVCTTWTKDTLVEKLQPYELENLEDVHVIE 502
             AA +L    ++GK C + +NNDNETLHL N+C  W+K+ L EKL+ +ELENLED+++IE
Sbjct: 159  WAANDLRTAMIKGKACGICKNNDNETLHLRNICFDWSKEDLAEKLKTFELENLEDINLIE 218

Query: 503  DPKDRKRNRGYAFLNFSTHMDAVAACNKLQKGSLYLGTTVRADVAFAKSAVEPDEQIMSQ 682
             P  + RNRGYAFL+FS+H+DAVA   KLQK  L+LGT VRA ++F+ + +  D+++M +
Sbjct: 219  HPDRKGRNRGYAFLDFSSHVDAVAGFLKLQKRDLFLGTDVRAQISFS-NTISQDDKVMEK 277

Query: 683  VKSVFLDGLPASWDESQVQKQFQKYGEIEHVQLARNMPSAKRKDFGFVYFRTREAALTCI 862
            VKSVFLDGLP  WDE  V+++F K+GEI+++QLARNM +AKRKDFGF+ F TR+AAL CI
Sbjct: 278  VKSVFLDGLPPHWDEDDVREKFGKFGEIDNIQLARNMFTAKRKDFGFISFTTRQAALGCI 337

Query: 863  DAVNKDGIGD-VRKVFLRATLKRPLQR-RVPSAVGGWRGYDTDDYNGWSTRPSGIGRSYS 1036
            D VNK   G+   K+ ++ATL+RP    + PS    W+G    D +    R   IG+SY 
Sbjct: 338  DMVNKGRFGEGSGKIRMKATLQRPKPTFKKPS----WQG----DTHMLGVRRGFIGKSYG 389

Query: 1037 NRENREVESFGRGHSPDHRIPGYNRYSTRGAVLETATSPVDIYGGRSRYSNRTSFETRYT 1216
            +RE          H    R P  N  + R   +     P+ +  G    S R        
Sbjct: 390  DREPHPNRF---RHLGPERRPYSNHSNYRHQPMVGRLPPMAVDDGERPVSGR-------- 438

Query: 1217 PVEEYSSQFRRGSVRQAPT 1273
               EY S +RR S    P+
Sbjct: 439  ---EYRSYYRRDSTVPDPS 454


>ref|XP_002302501.1| predicted protein [Populus trichocarpa] gi|222844227|gb|EEE81774.1|
           predicted protein [Populus trichocarpa]
          Length = 341

 Score =  299 bits (766), Expect = 2e-78
 Identities = 147/266 (55%), Positives = 198/266 (74%), Gaps = 1/266 (0%)
 Frame = +2

Query: 146 QKEYEVFVGGLDRDADEEDLRKVFKNMGEIVEVRLVKNKFSQKNKGFAFVRFATVEQAKR 325
           +KE+EVFVGGLD+DA E+DLRK+F  +GE+ EVRL+ N  ++KNKGFAF+RFATVEQAKR
Sbjct: 29  RKEFEVFVGGLDKDATEDDLRKIFSRVGEVTEVRLMMNPQTKKNKGFAFLRFATVEQAKR 88

Query: 326 AAAELNYTQVRGKVCEVTRNNDNETLHLGNVCTTWTKDTLVEKLQPYELENLEDVHVIED 505
           A  EL    + GK C VT + D++TL LGN+C TWTK+ L EKL+ Y +EN++D+ ++ED
Sbjct: 89  AVTELKNPVINGKQCGVTPSQDSDTLFLGNICKTWTKEALKEKLKHYGVENVKDLTLVED 148

Query: 506 PKDRKRNRGYAFLNFSTHMDAVAACNKLQKGSLYLGTTVRADVAFAKSAVEPDEQIMSQV 685
             +   NRG+AFL FS+  DA+ A  +LQK  +  G    A V+FA S ++P ++IM+QV
Sbjct: 149 SNNAGMNRGFAFLEFSSRSDAMDAFKRLQKRDVLFGVDRPAKVSFADSFIDPGDEIMAQV 208

Query: 686 KSVFLDGLPASWDESQVQKQFQKYGEIEHVQLARNMPSAKRKDFGFVYFRTREAALTCID 865
           K+VF+DGLPASWDE +V+   +KYGEIE ++LARNMPSA+RKDFGFV F T +AA+TC  
Sbjct: 209 KTVFIDGLPASWDEDRVRVLLKKYGEIEKIELARNMPSARRKDFGFVTFDTHDAAVTCAK 268

Query: 866 AVNKDGIGD-VRKVFLRATLKRPLQR 940
           ++N   +G+   K  +RA L RPLQR
Sbjct: 269 SINNAELGEGDNKAKVRARLSRPLQR 294