BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00005057
         (508 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002519025.1| Splicing factor 3B subunit, putative [Ricinu...   345   2e-93
ref|XP_004152814.1| PREDICTED: splicing factor 3B subunit 2-like...   343   8e-93
ref|NP_001048592.1| Os02g0827300 [Oryza sativa Japonica Group] g...   342   2e-92
gb|EAY88100.1| hypothetical protein OsI_09533 [Oryza sativa Indi...   342   2e-92
dbj|BAJ93118.1| predicted protein [Hordeum vulgare subsp. vulgare]    341   3e-92

>ref|XP_002519025.1| Splicing factor 3B subunit, putative [Ricinus communis]
           gi|223541688|gb|EEF43236.1| Splicing factor 3B subunit,
           putative [Ricinus communis]
          Length = 590

 Score =  345 bits (886), Expect = 2e-93
 Identities = 162/169 (95%), Positives = 166/169 (98%)
 Frame = +1

Query: 1   GKRGIEKQPFQLPDFIAATGIEKIRQAYIEKEDSKKLKQKQRERMQPKMGKMDIDYQVLH 180
           GKRGIEKQPFQLPDFIAATGIEKIRQAYIEKEDSKKLKQKQRERMQPKMGKMDIDYQVLH
Sbjct: 226 GKRGIEKQPFQLPDFIAATGIEKIRQAYIEKEDSKKLKQKQRERMQPKMGKMDIDYQVLH 285

Query: 181 DAFFKFQTKPKLTTHGDLYYEGKEFEVKLREMKPGMLSRELKEALGMPEGAPPPWLINMQ 360
           DAFFK+QTKPKLTTHGDLY+EGKEFEVKLREMKPG LS+ELKE+LGMPEGAPPPWLINMQ
Sbjct: 286 DAFFKYQTKPKLTTHGDLYHEGKEFEVKLREMKPGTLSQELKESLGMPEGAPPPWLINMQ 345

Query: 361 RYGPPPSYPHLKIPGLNAPIPLGASFGYHPGGWGKPPVDENGRPLYGDV 507
           RYGPPPSYPHLKIPGLNAPIP GASFGYHPGGWGKPPVDE GRPLYGDV
Sbjct: 346 RYGPPPSYPHLKIPGLNAPIPPGASFGYHPGGWGKPPVDEYGRPLYGDV 394


>ref|XP_004152814.1| PREDICTED: splicing factor 3B subunit 2-like [Cucumis sativus]
           gi|449515207|ref|XP_004164641.1| PREDICTED: splicing
           factor 3B subunit 2-like [Cucumis sativus]
          Length = 580

 Score =  343 bits (880), Expect = 8e-93
 Identities = 163/169 (96%), Positives = 165/169 (97%)
 Frame = +1

Query: 1   GKRGIEKQPFQLPDFIAATGIEKIRQAYIEKEDSKKLKQKQRERMQPKMGKMDIDYQVLH 180
           GKRGIEKQPFQLPDFIAATGIEKIRQAYIEKEDSKKLKQKQRERMQPKMGKMDIDYQVLH
Sbjct: 215 GKRGIEKQPFQLPDFIAATGIEKIRQAYIEKEDSKKLKQKQRERMQPKMGKMDIDYQVLH 274

Query: 181 DAFFKFQTKPKLTTHGDLYYEGKEFEVKLREMKPGMLSRELKEALGMPEGAPPPWLINMQ 360
           DAFFK+QTKPKLTT GDLYYEGKEFEVKLREMKPGMLS+ELKEALGMPEGAPPPWLINMQ
Sbjct: 275 DAFFKYQTKPKLTTLGDLYYEGKEFEVKLREMKPGMLSQELKEALGMPEGAPPPWLINMQ 334

Query: 361 RYGPPPSYPHLKIPGLNAPIPLGASFGYHPGGWGKPPVDENGRPLYGDV 507
           RYGPPPSYP LKIPGLNAPIP GASFGYHPGGWGKPPVDE GRPLYGDV
Sbjct: 335 RYGPPPSYPDLKIPGLNAPIPPGASFGYHPGGWGKPPVDEYGRPLYGDV 383


>ref|NP_001048592.1| Os02g0827300 [Oryza sativa Japonica Group]
           gi|48716448|dbj|BAD23055.1| putative splicing factor 3B
           subunit 2 [Oryza sativa Japonica Group]
           gi|113538123|dbj|BAF10506.1| Os02g0827300 [Oryza sativa
           Japonica Group] gi|125584232|gb|EAZ25163.1| hypothetical
           protein OsJ_08964 [Oryza sativa Japonica Group]
          Length = 582

 Score =  342 bits (876), Expect = 2e-92
 Identities = 161/169 (95%), Positives = 165/169 (97%)
 Frame = +1

Query: 1   GKRGIEKQPFQLPDFIAATGIEKIRQAYIEKEDSKKLKQKQRERMQPKMGKMDIDYQVLH 180
           GKRGIEKQPFQLPDFIAATGIEKIRQAYIEKEDSKKLKQKQRERMQPKMGKMDIDYQVLH
Sbjct: 213 GKRGIEKQPFQLPDFIAATGIEKIRQAYIEKEDSKKLKQKQRERMQPKMGKMDIDYQVLH 272

Query: 181 DAFFKFQTKPKLTTHGDLYYEGKEFEVKLREMKPGMLSRELKEALGMPEGAPPPWLINMQ 360
           DAFFK+QTKPKLT+HGDLYYEGKEFEVKLREMKPGMLSRELKEALGMP+GAPPPWLINMQ
Sbjct: 273 DAFFKYQTKPKLTSHGDLYYEGKEFEVKLREMKPGMLSRELKEALGMPDGAPPPWLINMQ 332

Query: 361 RYGPPPSYPHLKIPGLNAPIPLGASFGYHPGGWGKPPVDENGRPLYGDV 507
           RYGPPPSYP LKIPGLNAPIP GASFGY PG WGKPPVDE+GRPLYGDV
Sbjct: 333 RYGPPPSYPQLKIPGLNAPIPPGASFGYRPGEWGKPPVDEHGRPLYGDV 381


>gb|EAY88100.1| hypothetical protein OsI_09533 [Oryza sativa Indica Group]
          Length = 581

 Score =  342 bits (876), Expect = 2e-92
 Identities = 161/169 (95%), Positives = 165/169 (97%)
 Frame = +1

Query: 1   GKRGIEKQPFQLPDFIAATGIEKIRQAYIEKEDSKKLKQKQRERMQPKMGKMDIDYQVLH 180
           GKRGIEKQPFQLPDFIAATGIEKIRQAYIEKEDSKKLKQKQRERMQPKMGKMDIDYQVLH
Sbjct: 213 GKRGIEKQPFQLPDFIAATGIEKIRQAYIEKEDSKKLKQKQRERMQPKMGKMDIDYQVLH 272

Query: 181 DAFFKFQTKPKLTTHGDLYYEGKEFEVKLREMKPGMLSRELKEALGMPEGAPPPWLINMQ 360
           DAFFK+QTKPKLT+HGDLYYEGKEFEVKLREMKPGMLSRELKEALGMP+GAPPPWLINMQ
Sbjct: 273 DAFFKYQTKPKLTSHGDLYYEGKEFEVKLREMKPGMLSRELKEALGMPDGAPPPWLINMQ 332

Query: 361 RYGPPPSYPHLKIPGLNAPIPLGASFGYHPGGWGKPPVDENGRPLYGDV 507
           RYGPPPSYP LKIPGLNAPIP GASFGY PG WGKPPVDE+GRPLYGDV
Sbjct: 333 RYGPPPSYPQLKIPGLNAPIPPGASFGYRPGEWGKPPVDEHGRPLYGDV 381


>dbj|BAJ93118.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 435

 Score =  341 bits (875), Expect = 3e-92
 Identities = 161/169 (95%), Positives = 165/169 (97%)
 Frame = +1

Query: 1   GKRGIEKQPFQLPDFIAATGIEKIRQAYIEKEDSKKLKQKQRERMQPKMGKMDIDYQVLH 180
           GKRGIEKQPFQLPDFIAATGIEKIRQAYIEKEDSKKLKQKQRERMQPKMGKMDIDYQVLH
Sbjct: 65  GKRGIEKQPFQLPDFIAATGIEKIRQAYIEKEDSKKLKQKQRERMQPKMGKMDIDYQVLH 124

Query: 181 DAFFKFQTKPKLTTHGDLYYEGKEFEVKLREMKPGMLSRELKEALGMPEGAPPPWLINMQ 360
           DAFFK+QTKPKLT+HGDLYYEGKEFEVKLREMKPGMLSRELKEALGMPEGAPPPWLINMQ
Sbjct: 125 DAFFKYQTKPKLTSHGDLYYEGKEFEVKLREMKPGMLSRELKEALGMPEGAPPPWLINMQ 184

Query: 361 RYGPPPSYPHLKIPGLNAPIPLGASFGYHPGGWGKPPVDENGRPLYGDV 507
           RYGPPPSYP LKIPGLNAPIP GA+FGY PG WGKPPVDE+GRPLYGDV
Sbjct: 185 RYGPPPSYPSLKIPGLNAPIPPGATFGYRPGEWGKPPVDEHGRPLYGDV 233