BLASTX nr result
ID: Coptis25_contig00005048
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00005048 (200 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|ACN33682.1| unknown [Zea mays] 121 7e-26 ref|NP_001152284.1| set1 complex component swd2 [Zea mays] gi|19... 121 7e-26 ref|XP_002275160.1| PREDICTED: WD repeat-containing protein 82-B... 120 9e-26 ref|XP_002521457.1| COMPASS component SWD2, putative [Ricinus co... 120 9e-26 emb|CBI34875.3| unnamed protein product [Vitis vinifera] 120 9e-26 >gb|ACN33682.1| unknown [Zea mays] Length = 318 Score = 121 bits (303), Expect = 7e-26 Identities = 57/66 (86%), Positives = 61/66 (92%) Frame = -1 Query: 200 VGGDTAEVSDIKFSNDGKSMLLTTTNNNIYVLDAYGGEKRCGFSSEPSPNVVTEATFSQD 21 VGGDTAEVSDIKFSNDGKSMLLTTTNN+IYVLDAYGG+KRCGFS EPSPNV EA F+ D Sbjct: 197 VGGDTAEVSDIKFSNDGKSMLLTTTNNHIYVLDAYGGDKRCGFSLEPSPNVTNEAAFTPD 256 Query: 20 GQYVVS 3 GQYV+S Sbjct: 257 GQYVIS 262 >ref|NP_001152284.1| set1 complex component swd2 [Zea mays] gi|195654651|gb|ACG46793.1| set1 complex component swd2 [Zea mays] Length = 318 Score = 121 bits (303), Expect = 7e-26 Identities = 57/66 (86%), Positives = 61/66 (92%) Frame = -1 Query: 200 VGGDTAEVSDIKFSNDGKSMLLTTTNNNIYVLDAYGGEKRCGFSSEPSPNVVTEATFSQD 21 VGGDTAEVSDIKFSNDGKSMLLTTTNN+IYVLDAYGG+KRCGFS EPSPNV EA F+ D Sbjct: 197 VGGDTAEVSDIKFSNDGKSMLLTTTNNHIYVLDAYGGDKRCGFSLEPSPNVTNEAAFTPD 256 Query: 20 GQYVVS 3 GQYV+S Sbjct: 257 GQYVIS 262 >ref|XP_002275160.1| PREDICTED: WD repeat-containing protein 82-B-like [Vitis vinifera] Length = 339 Score = 120 bits (302), Expect = 9e-26 Identities = 58/66 (87%), Positives = 60/66 (90%) Frame = -1 Query: 200 VGGDTAEVSDIKFSNDGKSMLLTTTNNNIYVLDAYGGEKRCGFSSEPSPNVVTEATFSQD 21 VGGDTAEV DIKFSNDGKSMLLTTTNNNIYVLDAYGGEKRCGFS EPSP+ EATF+ D Sbjct: 197 VGGDTAEVCDIKFSNDGKSMLLTTTNNNIYVLDAYGGEKRCGFSLEPSPSTTIEATFTPD 256 Query: 20 GQYVVS 3 GQYVVS Sbjct: 257 GQYVVS 262 >ref|XP_002521457.1| COMPASS component SWD2, putative [Ricinus communis] gi|223539356|gb|EEF40947.1| COMPASS component SWD2, putative [Ricinus communis] Length = 338 Score = 120 bits (302), Expect = 9e-26 Identities = 58/66 (87%), Positives = 60/66 (90%) Frame = -1 Query: 200 VGGDTAEVSDIKFSNDGKSMLLTTTNNNIYVLDAYGGEKRCGFSSEPSPNVVTEATFSQD 21 VGGDTAEV DIKFSNDGKSMLLTTT+NNIYVLDAYGGEKRCGFS EPSPN EATF+ D Sbjct: 196 VGGDTAEVCDIKFSNDGKSMLLTTTSNNIYVLDAYGGEKRCGFSLEPSPNTTIEATFTPD 255 Query: 20 GQYVVS 3 GQYVVS Sbjct: 256 GQYVVS 261 >emb|CBI34875.3| unnamed protein product [Vitis vinifera] Length = 338 Score = 120 bits (302), Expect = 9e-26 Identities = 58/66 (87%), Positives = 60/66 (90%) Frame = -1 Query: 200 VGGDTAEVSDIKFSNDGKSMLLTTTNNNIYVLDAYGGEKRCGFSSEPSPNVVTEATFSQD 21 VGGDTAEV DIKFSNDGKSMLLTTTNNNIYVLDAYGGEKRCGFS EPSP+ EATF+ D Sbjct: 196 VGGDTAEVCDIKFSNDGKSMLLTTTNNNIYVLDAYGGEKRCGFSLEPSPSTTIEATFTPD 255 Query: 20 GQYVVS 3 GQYVVS Sbjct: 256 GQYVVS 261