BLASTX nr result

ID: Coptis25_contig00005048 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00005048
         (200 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACN33682.1| unknown [Zea mays]                                     121   7e-26
ref|NP_001152284.1| set1 complex component swd2 [Zea mays] gi|19...   121   7e-26
ref|XP_002275160.1| PREDICTED: WD repeat-containing protein 82-B...   120   9e-26
ref|XP_002521457.1| COMPASS component SWD2, putative [Ricinus co...   120   9e-26
emb|CBI34875.3| unnamed protein product [Vitis vinifera]              120   9e-26

>gb|ACN33682.1| unknown [Zea mays]
          Length = 318

 Score =  121 bits (303), Expect = 7e-26
 Identities = 57/66 (86%), Positives = 61/66 (92%)
 Frame = -1

Query: 200 VGGDTAEVSDIKFSNDGKSMLLTTTNNNIYVLDAYGGEKRCGFSSEPSPNVVTEATFSQD 21
           VGGDTAEVSDIKFSNDGKSMLLTTTNN+IYVLDAYGG+KRCGFS EPSPNV  EA F+ D
Sbjct: 197 VGGDTAEVSDIKFSNDGKSMLLTTTNNHIYVLDAYGGDKRCGFSLEPSPNVTNEAAFTPD 256

Query: 20  GQYVVS 3
           GQYV+S
Sbjct: 257 GQYVIS 262


>ref|NP_001152284.1| set1 complex component swd2 [Zea mays] gi|195654651|gb|ACG46793.1|
           set1 complex component swd2 [Zea mays]
          Length = 318

 Score =  121 bits (303), Expect = 7e-26
 Identities = 57/66 (86%), Positives = 61/66 (92%)
 Frame = -1

Query: 200 VGGDTAEVSDIKFSNDGKSMLLTTTNNNIYVLDAYGGEKRCGFSSEPSPNVVTEATFSQD 21
           VGGDTAEVSDIKFSNDGKSMLLTTTNN+IYVLDAYGG+KRCGFS EPSPNV  EA F+ D
Sbjct: 197 VGGDTAEVSDIKFSNDGKSMLLTTTNNHIYVLDAYGGDKRCGFSLEPSPNVTNEAAFTPD 256

Query: 20  GQYVVS 3
           GQYV+S
Sbjct: 257 GQYVIS 262


>ref|XP_002275160.1| PREDICTED: WD repeat-containing protein 82-B-like [Vitis vinifera]
          Length = 339

 Score =  120 bits (302), Expect = 9e-26
 Identities = 58/66 (87%), Positives = 60/66 (90%)
 Frame = -1

Query: 200 VGGDTAEVSDIKFSNDGKSMLLTTTNNNIYVLDAYGGEKRCGFSSEPSPNVVTEATFSQD 21
           VGGDTAEV DIKFSNDGKSMLLTTTNNNIYVLDAYGGEKRCGFS EPSP+   EATF+ D
Sbjct: 197 VGGDTAEVCDIKFSNDGKSMLLTTTNNNIYVLDAYGGEKRCGFSLEPSPSTTIEATFTPD 256

Query: 20  GQYVVS 3
           GQYVVS
Sbjct: 257 GQYVVS 262


>ref|XP_002521457.1| COMPASS component SWD2, putative [Ricinus communis]
           gi|223539356|gb|EEF40947.1| COMPASS component SWD2,
           putative [Ricinus communis]
          Length = 338

 Score =  120 bits (302), Expect = 9e-26
 Identities = 58/66 (87%), Positives = 60/66 (90%)
 Frame = -1

Query: 200 VGGDTAEVSDIKFSNDGKSMLLTTTNNNIYVLDAYGGEKRCGFSSEPSPNVVTEATFSQD 21
           VGGDTAEV DIKFSNDGKSMLLTTT+NNIYVLDAYGGEKRCGFS EPSPN   EATF+ D
Sbjct: 196 VGGDTAEVCDIKFSNDGKSMLLTTTSNNIYVLDAYGGEKRCGFSLEPSPNTTIEATFTPD 255

Query: 20  GQYVVS 3
           GQYVVS
Sbjct: 256 GQYVVS 261


>emb|CBI34875.3| unnamed protein product [Vitis vinifera]
          Length = 338

 Score =  120 bits (302), Expect = 9e-26
 Identities = 58/66 (87%), Positives = 60/66 (90%)
 Frame = -1

Query: 200 VGGDTAEVSDIKFSNDGKSMLLTTTNNNIYVLDAYGGEKRCGFSSEPSPNVVTEATFSQD 21
           VGGDTAEV DIKFSNDGKSMLLTTTNNNIYVLDAYGGEKRCGFS EPSP+   EATF+ D
Sbjct: 196 VGGDTAEVCDIKFSNDGKSMLLTTTNNNIYVLDAYGGEKRCGFSLEPSPSTTIEATFTPD 255

Query: 20  GQYVVS 3
           GQYVVS
Sbjct: 256 GQYVVS 261


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