BLASTX nr result

ID: Coptis25_contig00005047 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00005047
         (1819 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEF01212.1| FVE [x Doritaenopsis hybrid cultivar]                  803   0.0  
ref|XP_002514113.1| WD-repeat protein, putative [Ricinus communi...   800   0.0  
ref|XP_003546456.1| PREDICTED: WD-40 repeat-containing protein M...   796   0.0  
ref|XP_003533752.1| PREDICTED: WD-40 repeat-containing protein M...   796   0.0  
ref|XP_004158447.1| PREDICTED: WD-40 repeat-containing protein M...   795   0.0  

>gb|AEF01212.1| FVE [x Doritaenopsis hybrid cultivar]
          Length = 468

 Score =  803 bits (2075), Expect = 0.0
 Identities = 383/468 (81%), Positives = 410/468 (87%), Gaps = 7/468 (1%)
 Frame = +1

Query: 88   MRERGKAGKPSVDERYTQWKSLVPVLYDWLANHNLVWPSLSCRWGPQLETATYKNRQRLY 267
            M+ERGKAG+ SVDERYTQWKSLVPVLYDWLANHNLVWPSLSCRWGPQ+E ATYKNRQRLY
Sbjct: 1    MKERGKAGQRSVDERYTQWKSLVPVLYDWLANHNLVWPSLSCRWGPQVEHATYKNRQRLY 60

Query: 268  LSEQTDGSVPNTLVIANCEVVKPRVAAAEHISQFNEEARSPFVKKFKTIIHPGEVNRIRE 447
            LSEQTDGSVPNTLVIANC+VVKPRVAAAEHISQFNEEARSPFVKKFKTIIHPGEVNRIRE
Sbjct: 61   LSEQTDGSVPNTLVIANCDVVKPRVAAAEHISQFNEEARSPFVKKFKTIIHPGEVNRIRE 120

Query: 448  LPQNSKIVATHTDSPDVLIWDVESQPNRHAVLGAADSRPDLILTGHQDNAEFALAMCPTE 627
            LPQNSKIV THTDSPDVLIWDVESQPNRHAVLGAA SRPDL+LTGHQ+NAEFAL+MCP E
Sbjct: 121  LPQNSKIVGTHTDSPDVLIWDVESQPNRHAVLGAAPSRPDLVLTGHQENAEFALSMCPIE 180

Query: 628  PFVLSGGKDKSVVLWSIHDHISA-------SATDXXXXXXXXXXXXXXXXXXXXXXXXVG 786
            P VLSGGKD SVVLWSI DHIS         + +                        + 
Sbjct: 181  PLVLSGGKDMSVVLWSIQDHISTLGVASDVKSLEASSGSSGGKQAAKAGNNKASDSPTLA 240

Query: 787  PRGIYQGHDDTVEDVQFCPSSAQEFCSVGDDSCLILWDARAGTTPAVKVEKAHNADLHCV 966
            PRG+YQGH+DTVEDVQFCPSSA+EFCSVGDDSCLILWDAR+GT+P VKVEKAHN DLHCV
Sbjct: 241  PRGVYQGHEDTVEDVQFCPSSAEEFCSVGDDSCLILWDARSGTSPVVKVEKAHNEDLHCV 300

Query: 967  DWNPHDEHLILTGSADNSVRMFDRRNLTSGGVGSPVFKFEGHKAAVLCVQWSPDVATVFG 1146
            DWNPHD + ILTGSADNSVRMFDRRNL+SGGVGSPV KFEGH AAVLCVQWSPD A+VFG
Sbjct: 301  DWNPHDVNYILTGSADNSVRMFDRRNLSSGGVGSPVHKFEGHSAAVLCVQWSPDKASVFG 360

Query: 1147 SAADDGLLNVWDYDKIGKKKDRVGTRMPNSPPGLFFQHGGHRDKVVDFHWNAADPWTIVS 1326
            SAA+DG LNVWDY+K+GKK++R GTR  NSPPGLFFQH GHRDKVVDFHWNA+DPWTIVS
Sbjct: 361  SAAEDGFLNVWDYEKVGKKRERTGTRTTNSPPGLFFQHAGHRDKVVDFHWNASDPWTIVS 420

Query: 1327 VSDDCESTGGGGTLQIWRMSDLIYRPEEEVLAELENFKSHILTCSSKS 1470
            VSDDC+STGGGGTLQIWRMSDLIYRPEEEVL ELE FKSHILTC+ K+
Sbjct: 421  VSDDCQSTGGGGTLQIWRMSDLIYRPEEEVLEELEKFKSHILTCAPKT 468


>ref|XP_002514113.1| WD-repeat protein, putative [Ricinus communis]
            gi|223546569|gb|EEF48067.1| WD-repeat protein, putative
            [Ricinus communis]
          Length = 503

 Score =  800 bits (2065), Expect = 0.0
 Identities = 380/456 (83%), Positives = 410/456 (89%), Gaps = 5/456 (1%)
 Frame = +1

Query: 118  SVDERYTQWKSLVPVLYDWLANHNLVWPSLSCRWGPQLETATYKNRQRLYLSEQTDGSVP 297
            +VDE+YTQWKSLVPVLYDWLANHNLVWPSLSCRWGPQLE ATYKNRQRLYLSEQTDGSVP
Sbjct: 49   TVDEKYTQWKSLVPVLYDWLANHNLVWPSLSCRWGPQLEQATYKNRQRLYLSEQTDGSVP 108

Query: 298  NTLVIANCEVVKPRVAAAEHISQFNEEARSPFVKKFKTIIHPGEVNRIRELPQNSKIVAT 477
            NTLVIANCEVVKPRVAAAEHI+QFNEEARSPFVKK+KTIIHPGEVNRIRELPQNS+IVAT
Sbjct: 109  NTLVIANCEVVKPRVAAAEHIAQFNEEARSPFVKKYKTIIHPGEVNRIRELPQNSRIVAT 168

Query: 478  HTDSPDVLIWDVESQPNRHAVLGAADSRPDLILTGHQDNAEFALAMCPTEPFVLSGGKDK 657
            HTD PDVLIWDVE+QPNRHAVLGA +SRPDLILTGHQDNAEFALAMCPTEPFVLSGGKDK
Sbjct: 169  HTDGPDVLIWDVEAQPNRHAVLGATNSRPDLILTGHQDNAEFALAMCPTEPFVLSGGKDK 228

Query: 658  SVVLWSIHDHISASATDXXXXXXXXXXXXXXXXXXXXXXXX-----VGPRGIYQGHDDTV 822
            SVVLWSI DHI+ASATD                             VGPRGIYQGH+DTV
Sbjct: 229  SVVLWSIQDHITASATDPATAKSPGSGGSIIKRAGEGNDRAAESPSVGPRGIYQGHEDTV 288

Query: 823  EDVQFCPSSAQEFCSVGDDSCLILWDARAGTTPAVKVEKAHNADLHCVDWNPHDEHLILT 1002
            EDV FCPSSAQEFCSVGDDSCLILWDAR G++PAVKVEKAHNADLHCVDWNPHD +LI+T
Sbjct: 289  EDVTFCPSSAQEFCSVGDDSCLILWDARIGSSPAVKVEKAHNADLHCVDWNPHDNNLIIT 348

Query: 1003 GSADNSVRMFDRRNLTSGGVGSPVFKFEGHKAAVLCVQWSPDVATVFGSAADDGLLNVWD 1182
            GSADNSVRMFDRRNLTS GVG+PV+KFEGHKAAVLCVQWSPD ++VFGS+A+DGLLN+WD
Sbjct: 349  GSADNSVRMFDRRNLTSNGVGTPVYKFEGHKAAVLCVQWSPDKSSVFGSSAEDGLLNIWD 408

Query: 1183 YDKIGKKKDRVGTRMPNSPPGLFFQHGGHRDKVVDFHWNAADPWTIVSVSDDCESTGGGG 1362
            YDK+GKK +R  TR PNSP GLFFQH GHRDKVVDFHWNA+DPWTIVSVSDDC++TGGGG
Sbjct: 409  YDKVGKKTER-ATRAPNSPAGLFFQHAGHRDKVVDFHWNASDPWTIVSVSDDCDTTGGGG 467

Query: 1363 TLQIWRMSDLIYRPEEEVLAELENFKSHILTCSSKS 1470
            TLQIWRMSDLIYRPE+EVLAELE FKSH++ C+SK+
Sbjct: 468  TLQIWRMSDLIYRPEDEVLAELEKFKSHVIECTSKA 503


>ref|XP_003546456.1| PREDICTED: WD-40 repeat-containing protein MSI4-like [Glycine max]
          Length = 508

 Score =  796 bits (2056), Expect = 0.0
 Identities = 378/455 (83%), Positives = 410/455 (90%), Gaps = 2/455 (0%)
 Frame = +1

Query: 112  KPSVDERYTQWKSLVPVLYDWLANHNLVWPSLSCRWGPQLETATYKNRQRLYLSEQTDGS 291
            +PSVDE+YTQWKSLVPVLYDWLANHNLVWPSLSCRWGPQLE ATYKNRQRLYLSEQTDGS
Sbjct: 53   QPSVDEKYTQWKSLVPVLYDWLANHNLVWPSLSCRWGPQLEQATYKNRQRLYLSEQTDGS 112

Query: 292  VPNTLVIANCEVVKPRVAAAEHISQFNEEARSPFVKKFKTIIHPGEVNRIRELPQNSKIV 471
            VPNTLVIANCEVVKPRVAAAEHISQFNEEARSPFVKK+KTIIHPGEVNRIRELPQNSKIV
Sbjct: 113  VPNTLVIANCEVVKPRVAAAEHISQFNEEARSPFVKKYKTIIHPGEVNRIRELPQNSKIV 172

Query: 472  ATHTDSPDVLIWDVESQPNRHAVLGAADSRPDLILTGHQDNAEFALAMCPTEPFVLSGGK 651
            ATHTDSPDVL+WDVESQPNRHAVLGA +SRPDLILTGHQDNAEFALAMCPTEP+VLSGGK
Sbjct: 173  ATHTDSPDVLVWDVESQPNRHAVLGATNSRPDLILTGHQDNAEFALAMCPTEPYVLSGGK 232

Query: 652  DKSVVLWSIHDHISASATD--XXXXXXXXXXXXXXXXXXXXXXXXVGPRGIYQGHDDTVE 825
            DK+VVLWSI DHI+++ATD                          VGPRGIY GH+DTVE
Sbjct: 233  DKTVVLWSIEDHITSAATDSKSGGSIIKQNSKSGEGNDKTADGPTVGPRGIYCGHEDTVE 292

Query: 826  DVQFCPSSAQEFCSVGDDSCLILWDARAGTTPAVKVEKAHNADLHCVDWNPHDEHLILTG 1005
            DV FCPSSAQEFCSVGDDSCLILWDAR G++P VKVEKAHNADLHCVDWNPHD++LILTG
Sbjct: 293  DVTFCPSSAQEFCSVGDDSCLILWDARVGSSPVVKVEKAHNADLHCVDWNPHDDNLILTG 352

Query: 1006 SADNSVRMFDRRNLTSGGVGSPVFKFEGHKAAVLCVQWSPDVATVFGSAADDGLLNVWDY 1185
            SADNSVRMFDRRNLT+ GVGSP+ KFEGHKAAVLCVQWSPD ++VFGS+A+DGLLN+WDY
Sbjct: 353  SADNSVRMFDRRNLTTNGVGSPIHKFEGHKAAVLCVQWSPDKSSVFGSSAEDGLLNIWDY 412

Query: 1186 DKIGKKKDRVGTRMPNSPPGLFFQHGGHRDKVVDFHWNAADPWTIVSVSDDCESTGGGGT 1365
            +K+GKK +R G  + +SPPGLFFQH GHRDKVVDFHWNA DPWTIVSVSDDCESTGGGGT
Sbjct: 413  EKVGKKIERTGKSI-SSPPGLFFQHAGHRDKVVDFHWNAYDPWTIVSVSDDCESTGGGGT 471

Query: 1366 LQIWRMSDLIYRPEEEVLAELENFKSHILTCSSKS 1470
            LQIWRMSDLIYRPE+EVLAELE FKSH++ C+SK+
Sbjct: 472  LQIWRMSDLIYRPEDEVLAELEKFKSHVVACASKT 506


>ref|XP_003533752.1| PREDICTED: WD-40 repeat-containing protein MSI4-like isoform 1
            [Glycine max]
          Length = 513

 Score =  796 bits (2055), Expect = 0.0
 Identities = 378/462 (81%), Positives = 414/462 (89%), Gaps = 2/462 (0%)
 Frame = +1

Query: 91   RERGKAGKPSVDERYTQWKSLVPVLYDWLANHNLVWPSLSCRWGPQLETATYKNRQRLYL 270
            +++ +  +PSVDE+YTQWKSLVPVLYDWLANHNLVWPSLSCRWGPQLE ATYKNRQRLYL
Sbjct: 51   QQQQQQDQPSVDEKYTQWKSLVPVLYDWLANHNLVWPSLSCRWGPQLEQATYKNRQRLYL 110

Query: 271  SEQTDGSVPNTLVIANCEVVKPRVAAAEHISQFNEEARSPFVKKFKTIIHPGEVNRIREL 450
            SEQTDGSVPNTLVIANCEVVKPRVAAAEHISQFNEEARSPFVKK+KTIIHPGEVNRIREL
Sbjct: 111  SEQTDGSVPNTLVIANCEVVKPRVAAAEHISQFNEEARSPFVKKYKTIIHPGEVNRIREL 170

Query: 451  PQNSKIVATHTDSPDVLIWDVESQPNRHAVLGAADSRPDLILTGHQDNAEFALAMCPTEP 630
            PQNSKIVATHTDSPDVL+WDVESQPNRHAVLGA +SRPDLILTGHQDNAEFALAMCPTEP
Sbjct: 171  PQNSKIVATHTDSPDVLVWDVESQPNRHAVLGATNSRPDLILTGHQDNAEFALAMCPTEP 230

Query: 631  FVLSGGKDKSVVLWSIHDHISASATD--XXXXXXXXXXXXXXXXXXXXXXXXVGPRGIYQ 804
            +VLSGGKDK+VVLWSI DHI+++ATD                          VGPRGIY 
Sbjct: 231  YVLSGGKDKTVVLWSIEDHITSAATDSKSGGSIIKQNSKSGEGNDKTADGPTVGPRGIYC 290

Query: 805  GHDDTVEDVQFCPSSAQEFCSVGDDSCLILWDARAGTTPAVKVEKAHNADLHCVDWNPHD 984
            GH+DTVEDV FCPSSAQEFCSVGDDSCLILWDAR G++P VKVEKAHNADLHCVDWNPHD
Sbjct: 291  GHEDTVEDVAFCPSSAQEFCSVGDDSCLILWDARVGSSPVVKVEKAHNADLHCVDWNPHD 350

Query: 985  EHLILTGSADNSVRMFDRRNLTSGGVGSPVFKFEGHKAAVLCVQWSPDVATVFGSAADDG 1164
            ++LILTGSADNSVRMFDRRNLT+ GVGSP+ KFEGHKAAVLCVQWSPD ++VFGS+A+DG
Sbjct: 351  DNLILTGSADNSVRMFDRRNLTTNGVGSPIHKFEGHKAAVLCVQWSPDKSSVFGSSAEDG 410

Query: 1165 LLNVWDYDKIGKKKDRVGTRMPNSPPGLFFQHGGHRDKVVDFHWNAADPWTIVSVSDDCE 1344
            LLN+WDY+K+GKK +R G  + +SPPGLFFQH GHRDKVVDFHWNA DPWTIVSVSDDCE
Sbjct: 411  LLNIWDYEKVGKKIERSGKSI-SSPPGLFFQHAGHRDKVVDFHWNAYDPWTIVSVSDDCE 469

Query: 1345 STGGGGTLQIWRMSDLIYRPEEEVLAELENFKSHILTCSSKS 1470
            STGGGGTLQIWRMSDLIYRPE+EVLAELE FKSH++ C+SK+
Sbjct: 470  STGGGGTLQIWRMSDLIYRPEDEVLAELEKFKSHVVACASKT 511


>ref|XP_004158447.1| PREDICTED: WD-40 repeat-containing protein MSI4-like [Cucumis
            sativus]
          Length = 518

 Score =  795 bits (2054), Expect = 0.0
 Identities = 373/457 (81%), Positives = 409/457 (89%), Gaps = 5/457 (1%)
 Frame = +1

Query: 112  KPSVDERYTQWKSLVPVLYDWLANHNLVWPSLSCRWGPQLETATYKNRQRLYLSEQTDGS 291
            +PSVDERYTQWKSLVPVLYDW ANHNLVWPSLSCRWGPQLE ATYKNRQRLYLSEQTDGS
Sbjct: 62   QPSVDERYTQWKSLVPVLYDWFANHNLVWPSLSCRWGPQLEQATYKNRQRLYLSEQTDGS 121

Query: 292  VPNTLVIANCEVVKPRVAAAEHISQFNEEARSPFVKKFKTIIHPGEVNRIRELPQNSKIV 471
            VPNTLVIANCEVVKPRVAAAEHISQFNEEARSPFVKK+KTIIHPGEVNRIRELPQNS+IV
Sbjct: 122  VPNTLVIANCEVVKPRVAAAEHISQFNEEARSPFVKKYKTIIHPGEVNRIRELPQNSRIV 181

Query: 472  ATHTDSPDVLIWDVESQPNRHAVLGAADSRPDLILTGHQDNAEFALAMCPTEPFVLSGGK 651
            ATHTDSPDVLIWDVE+QPNRHAVLGA +SRPDLILTGHQ+NAEFALAMCPTEP+VLSGGK
Sbjct: 182  ATHTDSPDVLIWDVEAQPNRHAVLGATNSRPDLILTGHQENAEFALAMCPTEPYVLSGGK 241

Query: 652  DKSVVLWSIHDHISASATDXXXXXXXXXXXXXXXXXXXXXXXX-----VGPRGIYQGHDD 816
            DK VVLWSI DHI+ SATD                             +GPRG+Y GH+D
Sbjct: 242  DKLVVLWSIQDHITTSATDAGASKSPGSGGSIIKKPGEANDKASDGPSIGPRGVYHGHED 301

Query: 817  TVEDVQFCPSSAQEFCSVGDDSCLILWDARAGTTPAVKVEKAHNADLHCVDWNPHDEHLI 996
            TVEDV FCPS+AQEFCSVGDDSCLILWDAR G++PAVKVEKAHNADLHCVDWNPHD++LI
Sbjct: 302  TVEDVTFCPSNAQEFCSVGDDSCLILWDARTGSSPAVKVEKAHNADLHCVDWNPHDDNLI 361

Query: 997  LTGSADNSVRMFDRRNLTSGGVGSPVFKFEGHKAAVLCVQWSPDVATVFGSAADDGLLNV 1176
            +TGSADNS+R+FDRRNLTS GVGSP++KFEGHKAAVLCVQWSPD ++VFGS+A+DGLLN+
Sbjct: 362  ITGSADNSIRLFDRRNLTSNGVGSPIYKFEGHKAAVLCVQWSPDKSSVFGSSAEDGLLNI 421

Query: 1177 WDYDKIGKKKDRVGTRMPNSPPGLFFQHGGHRDKVVDFHWNAADPWTIVSVSDDCESTGG 1356
            WDYDK+GKK +R  TR P +PPGLFFQH GHRDKVVDFHWNAADPWT+VSVSDDC++TGG
Sbjct: 422  WDYDKVGKKTER-ATRTPAAPPGLFFQHAGHRDKVVDFHWNAADPWTVVSVSDDCDTTGG 480

Query: 1357 GGTLQIWRMSDLIYRPEEEVLAELENFKSHILTCSSK 1467
            GGTLQIWRMSDLIYRPEEEVLAELE FKSH++ C++K
Sbjct: 481  GGTLQIWRMSDLIYRPEEEVLAELEKFKSHVIECAAK 517


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