BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00005045
         (2119 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABD63142.1| Retrotransposon gag protein [Asparagus officinalis]    332   3e-88
emb|CAN66393.1| hypothetical protein VITISV_019688 [Vitis vinifera]   321   4e-85
emb|CAN78930.1| hypothetical protein VITISV_008432 [Vitis vinifera]   320   7e-85
emb|CAN66953.1| hypothetical protein VITISV_012317 [Vitis vinifera]   317   8e-84
emb|CAN68404.1| hypothetical protein VITISV_035041 [Vitis vinifera]   316   1e-83

>gb|ABD63142.1| Retrotransposon gag protein [Asparagus officinalis]
          Length = 1788

 Score =  332 bits (850), Expect = 3e-88
 Identities = 191/513 (37%), Positives = 279/513 (54%), Gaps = 43/513 (8%)
 Frame = +2

Query: 710  LQQFSDEAIKLKLFPFSLKEKAKSWFHTLPSNSIATWERLCIVFLKNFFPNHKATAFRKV 889
            +++ +++AIKL+  PF+LK+KAK W ++LP+NSI+TWE    VFLK FFP HK    R  
Sbjct: 1    MRELTEDAIKLRFIPFALKDKAKKWLYSLPTNSISTWEEFVTVFLKKFFPIHKTVKLRNS 60

Query: 890  ISSFCQNEGESLWKCMERFKDILLQCPNHGLEKGRLVQIFYEGLDFNSKAMVETMSTGDF 1069
            I +F    GE  WK  +RFKD+L+QCP+HGLEK RL Q+ YEGLD++SK  +E+M  GDF
Sbjct: 61   IQNFKIVPGEPFWKYFDRFKDLLIQCPHHGLEKWRLCQVIYEGLDYSSKTSLESMCQGDF 120

Query: 1070 CDKTVDDAWSFLEDVAEKVQQWETSREPKKVASSTTKNAMFHVDKDFDANAKIAALVRRV 1249
              K  D+AW FLE ++EK  QWE   + +  + S +K++   ++ +  + AK+A ++RR+
Sbjct: 121  MRKNADEAWEFLESLSEKTMQWENC-DDRVSSVSQSKSSGLSLESNIASEAKMATILRRL 179

Query: 1250 EALELEKETKSPAQVNNVETPGCLLCDSLDHVIDNCP--GVTAQVNAFNTYQXXXXXXXX 1423
            EALE+++  ++PAQ+N++  PGC  C S  HV + CP  G    +   N           
Sbjct: 180  EALEVKE--RAPAQINHISAPGCHNCQSPTHVSEECPLLGNNHALEQMNAAFQRPRNDPF 237

Query: 1424 XXXXXQGWRNNPNLSWSKGIHQGG-----------PVGN-----------SNPVPQYAPQ 1537
                  GWRN+PN +W++G   G            P GN           + P P   P 
Sbjct: 238  SPTYNPGWRNHPNFAWNQGNSHGNQNFIPASNQQFPRGNTVPFNAPNNFSNPPFPNQHPH 297

Query: 1538 P------------PKLSPIE-------EAIAQLSQNAMKFQATTQQFMQASQLATQDNAQ 1660
            P             +LS +E       +A  Q +    +   T   FMQ +      N Q
Sbjct: 298  PHQHTNPSNSDHDKRLSVLEKGLEAMIKASTQTTNMLTQSSTTLNSFMQTTGQVLNSNTQ 357

Query: 1661 AIRKIEVTIGQIANTLNERDKGKFPSQPVANPNGQHEVGSNLSQGHHHEQVKSITTLRSG 1840
            AI ++E  +GQ+A  ++ER+KGKFPSQPVANP    + GS+    ++  Q+ +I TLRSG
Sbjct: 358  AIARLETQLGQLAAAVSEREKGKFPSQPVANPK---DTGSS---SNNPAQLNAIHTLRSG 411

Query: 1841 KHVDNKVETPRVEVRSDLGERESEESDISGPHASEASRQPSIPVESSPVPHYIPKAPFPQ 2020
            K +DN+V  P  +  S +    S+E+  S    +E   +P +         Y P APFP 
Sbjct: 412  KQIDNQVRMPPDQTPSPIQNTPSDETIPSDDQNAELEIEPDL-------DRYRPVAPFPD 464

Query: 2021 RLVQVTKGIQSNEILDVFKKVHINIPFLEAIKQ 2119
            RL       Q  +IL+ FK+V INIP L+AI+Q
Sbjct: 465  RLKPRKNSPQVEKILETFKQVKINIPLLDAIEQ 497


>emb|CAN66393.1| hypothetical protein VITISV_019688 [Vitis vinifera]
          Length = 1746

 Score =  321 bits (823), Expect = 4e-85
 Identities = 190/555 (34%), Positives = 291/555 (52%), Gaps = 21/555 (3%)
 Frame = +2

Query: 518  RSIKEFIYPTRTTRPSCIVPPPTNANHFELKPNLLGLLPKFRGMDEEDPYLHVREFEDIC 697
            RS+++ ++P R + PSCIVPP        ++P L+ LLP F GM+ E+PY H++EFED+C
Sbjct: 22   RSMRDRMHPPRMSAPSCIVPP---TEQLVIRPYLVSLLPTFHGMESENPYAHIKEFEDVC 78

Query: 698  GTVKLQQFSDEAIKLKLFPFSLKEKAKSWFHTLPSNSIATWERLCIVFLKNFFPNHKATA 877
             T +    S + ++LKLFPF+LK+KAK W ++L   SI +W  L   FLK FFP H+   
Sbjct: 79   NTFQEGGASIDMMRLKLFPFTLKDKAKIWLNSLRPRSIRSWTDLQAEFLKKFFPTHRTNG 138

Query: 878  FRKVISSFCQNEGESLWKCMERFKDILLQCPNHGLEKGRLVQIFYEGLDFNSKAMVETMS 1057
              + IS+F   E E  ++C ER+ + +  CP+HG +   LV  FY+G+  + K ++ETM 
Sbjct: 139  LERQISNFSAKENEKFYECWERYMEAINACPHHGFDTWLLVSYFYDGMSSSMKQLLETMC 198

Query: 1058 TGDFCDKTVDDAWSFLEDVAEKVQQW------ETSREPKKVASSTTKNAMFHVDKDFDAN 1219
             GDF  K  ++A  FL  VAE  + W      E  +   ++++  TK  M+ + +D D  
Sbjct: 199  GGDFMSKNPEEAMDFLSYVAEVSRGWDEPTKGEVGKMKSQLSAFNTKAGMYTLKEDDDMK 258

Query: 1220 AKIAALVRRVEALELEK--ETKSPAQVNNVETPGCLLCDSLDHVIDNCPGVTAQVNAFNT 1393
            AK+AA+ RR+E LEL++  E ++ A+   V+   C  C S +H+++ CP ++A+   F  
Sbjct: 259  AKLAAMTRRLEELELKRIHEVQAVAEA-PVQVKLCPNCKSYEHLVEECPAISAEREMFRD 317

Query: 1394 YQXXXXXXXXXXXXXQG------WRNNPNLSWSKGIHQGGPVGNSNPVPQYAPQPPKLSP 1555
                            G      WRN+PN SW     Q              P PP    
Sbjct: 318  QANVVGQFRPNNNAPYGNTYNSSWRNHPNFSWKAXATQ-----------YQQPDPPSQQS 366

Query: 1556 IEEAIAQLSQNAMKFQATTQQFMQASQLATQDNAQAIRKIEVTIGQIANTLNERDKGKFP 1735
             +   AQ++Q   + ++   + M   Q    D  Q    I+ +I ++ N    ++KG+FP
Sbjct: 367  SKATNAQINQRIDRVESILNKRMDGMQ---NDMNQKFDNIQYSISRLTNLNTLQEKGRFP 423

Query: 1736 SQPVANPNGQHEVGSNLSQGHHHEQVKSITTLRSGKHVDNKVETPRVEVRSDL---GERE 1906
            SQP  NP G HEV S   +    + VK++ TLRSGK ++     P VE   ++    E E
Sbjct: 424  SQPHQNPKGVHEVESQEGESSQMKDVKALITLRSGKKIEQPTPKPHVEKEEEIKKGNEME 483

Query: 1907 SEESDISGPHASEASRQPSIPVESSPVPHYIPKA---PFPQRLVQVTKGIQS-NEILDVF 2074
             +ES+IS       S   +IP +       + K+   PFPQ L    KGI++  EIL+V 
Sbjct: 484  DKESEISEEKKDSNSTMNAIPEKELLKEEMLKKSTSPPFPQAL-HGKKGIRNVAEILEVL 542

Query: 2075 KKVHINIPFLEAIKQ 2119
            ++V +NIP L+ IKQ
Sbjct: 543  RQVKVNIPLLDMIKQ 557


>emb|CAN78930.1| hypothetical protein VITISV_008432 [Vitis vinifera]
          Length = 1488

 Score =  320 bits (821), Expect = 7e-85
 Identities = 201/569 (35%), Positives = 300/569 (52%), Gaps = 36/569 (6%)
 Frame = +2

Query: 521  SIKEFIYPTRTTRPSCIVPPPTNANHFELKPNLLGLLPKFRGMDEEDPYLHVREFEDICG 700
            S+++ ++P R + PSCI+PP        ++P+++ LLP F GM+ E+PY H++EFE++C 
Sbjct: 90   SMRDRMHPPRMSAPSCILPP---LEQLVIRPHIVPLLPTFHGMESENPYSHIKEFEEVCN 146

Query: 701  TVKLQQFSDEAIKLKLFPFSLKEKAKSWFHTLPSNSIATWERLCIVFLKNFFPNHKATAF 880
            T +    S + ++LKLFPF+LK+KAK W ++L   SI  W  L   FLK +FP H+    
Sbjct: 147  TFREGGASIDLMRLKLFPFTLKDKAKIWLNSLRPRSIRNWVDLQAEFLKKYFPTHRTNGL 206

Query: 881  RKVISSFCQNEGESLWKCMERFKDILLQCPNHGLEKGRLVQIFYEGLDFNSKAMVETMST 1060
            ++ IS+F   E E   +C ER+ + +  CP+HG +   LV  FY+G+  + K ++ETM  
Sbjct: 207  KRQISNFSAKENEKFHECWERYMEAINACPHHGFDTWLLVSYFYDGMSSSMKQILETMCG 266

Query: 1061 GDFCDKTVDDAWSFLEDVAEKVQQWE--TSREPKKVASSTTKN---AMFHVDKDFDANAK 1225
            GDF  K  D+A  FL  VAE  + W+   SRE  K  S  T+N    M+ + +D D  AK
Sbjct: 267  GDFMSKNPDEAMDFLSYVAEVSRGWDEPNSREKGKFPSQQTQNPKAGMYMLSEDVDMKAK 326

Query: 1226 IAALVRRVEALELEK--ETKSPAQVNNVETPGCLLCDSLDHVIDNCPGVTA-------QV 1378
            +A L RR+E LEL+K  E ++ ++      P C +C S DHV+D CP + A       QV
Sbjct: 327  VATLARRLEELELKKMHEVQAISETQTHAMP-CTICQSCDHVVDECPTMPAVREMLGDQV 385

Query: 1379 NAFNTYQXXXXXXXXXXXXXQGWRNNPNLSWSKGIHQGGPVGNSNPVPQYAPQPPKLSPI 1558
            N    ++               WRN+PN SW        P G        APQ P  S +
Sbjct: 386  NVVGQFR-PNNSASYGNTYNSSWRNHPNFSWKPRPPPYQPQGQIQ-----APQQP--SSV 437

Query: 1559 EEAIAQLS---------QNAMKFQATTQ-QFMQASQLATQDNAQ-----AIRKIEVTIGQ 1693
            E+AIA LS         Q A+  Q   + + +++S     D  Q      I  I+ +I +
Sbjct: 438  EQAIANLSKVMNDFVGEQRAINSQLHQKIENVESSLNKRMDGMQNDLYHKIDNIQYSISR 497

Query: 1694 IANTLNERDKGKFPSQPVANPNGQHEVGSNLSQGHHHEQVKSITTLRSGKHVDNKVET-- 1867
            + N     +KGKFPSQP  NP G HEV +      + ++VK++ TLRSGK VD  +    
Sbjct: 498  LTNLNTVNEKGKFPSQPSQNPKGVHEVETQDGXSSNLKEVKAVITLRSGKEVDQPLPNLG 557

Query: 1868 PRVEVRS-----DLGERESEESDISGPHASEASRQPSIPVESSPVPHYIPKAPFPQRLVQ 2032
            P  E+RS       G+ + E+S       S    +P I ++   +  ++P  PFPQ L  
Sbjct: 558  PDEELRSKGPLIKEGKNQEEQSGKKSASKSSIEEEPRIVIKEDMMKKHMP-PPFPQALHG 616

Query: 2033 VTKGIQSNEILDVFKKVHINIPFLEAIKQ 2119
              +   S+EIL+V ++V +NIP L+ IKQ
Sbjct: 617  KKEIKNSSEILEVLRQVKVNIPLLDMIKQ 645


>emb|CAN66953.1| hypothetical protein VITISV_012317 [Vitis vinifera]
          Length = 996

 Score =  317 bits (812), Expect = 8e-84
 Identities = 199/573 (34%), Positives = 301/573 (52%), Gaps = 40/573 (6%)
 Frame = +2

Query: 521  SIKEFIYPTRTTRPSCIVPPPTNANHFELKPNLLGLLPKFRGMDEEDPYLHVREFEDICG 700
            S+++ ++P R + PSCI+PP        ++P+++ LLP F GM+ E+PY H++EFE++C 
Sbjct: 101  SMRDRMHPPRMSAPSCILPP---LEQLVIRPHIVPLLPTFHGMESENPYSHIKEFEEVCN 157

Query: 701  TVKLQQFSDEAIKLKLFPFSLKEKAKSWFHTLPSNSIATWERLCIVFLKNFFPNHKATAF 880
            T +    S + ++LKLFPF+LK+KAK W ++L   SI  W  L   FLK  FP H+    
Sbjct: 158  TFREGGASIDLMRLKLFPFTLKDKAKIWLNSLRPRSIRNWVDLQAEFLKKIFPTHRTNGL 217

Query: 881  RKVISSFCQNEGESLWKCMERFKDILLQCPNHGLEKGRLVQIFYEGLDFNSKAMVETMST 1060
            ++ IS+F   E E   +C ER+ + +  CP+HG +   LV  FY+G+  + K ++ETM  
Sbjct: 218  KRQISNFSAKENEKFHECWERYMEAINACPHHGFDTWLLVSYFYDGMSSSMKQILETMCG 277

Query: 1061 GDFCDKTVDDAWSFLEDVAEKVQQWE--TSREPKKVASSTTKN---AMFHVDKDFDANAK 1225
            GDF  K  ++A  FL  VAE  + W+   SRE  K  S  T+N    M+ + +D D  AK
Sbjct: 278  GDFMSKNPEEAMDFLSYVAEVSRGWDEPNSREKGKFPSQQTQNPKAGMYMLSEDVDMKAK 337

Query: 1226 IAALVRRVEALELEK----ETKSPAQVNNVETPGCLLCDSLDHVIDNCPGVTA------- 1372
            +A L RR+E LEL+K    +  S  QV+ +    C +C S DHV+D CP + A       
Sbjct: 338  VATLARRLEELELKKIHEVQAISDTQVHGMP---CTICQSCDHVVDECPTMPAVREMLGD 394

Query: 1373 QVNAFNTYQXXXXXXXXXXXXXQGWRNNPNLSWSKGIHQGGPVGNSNPVPQYAPQPPKLS 1552
            QVN    ++               WRN+PN SW        P   +      APQ P  S
Sbjct: 395  QVNVVGQFR-PNNSASYGNTYNSSWRNHPNFSWKPRPPPYQPQSQTQ-----APQQP--S 446

Query: 1553 PIEEAIAQLS---------QNAMKFQATTQ-QFMQASQL-----ATQDNAQAIRKIEVTI 1687
             +E+AI  LS         Q A+  Q   + + +++SQ+        D +Q I  I+ +I
Sbjct: 447  SVEQAIVNLSKVMGDFVGEQKAINSQLHQKIENVESSQIKRMEGIQNDLSQKIDNIQYSI 506

Query: 1688 GQIANTLNERDKGKFPSQPVANPNGQHEVGSNLSQGHHHEQVKSITTLRSGKHVDNKVET 1867
             ++ N     +KGKFPSQP  NP G HEV +   +  +  +VK++ TLRSGK VD  +  
Sbjct: 507  SRLTNLNTVIEKGKFPSQPSQNPKGVHEVETQDGESSNLRKVKAVITLRSGKEVDQPL-- 564

Query: 1868 PRVEVRSDL---------GERESEESDISGPHASEASRQPSIPVESSPVPHYIPKAPFPQ 2020
            P V +  +L         G+ + E+S       S    +P I ++   +  ++P  PFPQ
Sbjct: 565  PNVGLDEELRSKKPLTKEGKNQEEQSGKKSASKSSIEEEPRIVIKEDMMKKHMP-PPFPQ 623

Query: 2021 RLVQVTKGIQSNEILDVFKKVHINIPFLEAIKQ 2119
             L    +   S+EIL+V ++V +NIP L+ IKQ
Sbjct: 624  ALHGKKEIKNSSEILEVLRQVKVNIPLLDMIKQ 656


>emb|CAN68404.1| hypothetical protein VITISV_035041 [Vitis vinifera]
          Length = 1620

 Score =  316 bits (810), Expect = 1e-83
 Identities = 197/573 (34%), Positives = 300/573 (52%), Gaps = 40/573 (6%)
 Frame = +2

Query: 521  SIKEFIYPTRTTRPSCIVPPPTNANHFELKPNLLGLLPKFRGMDEEDPYLHVREFEDICG 700
            S+++ ++P R + PSCIVPP        ++P+++ LLP F GM+ E+PY H++EFE++C 
Sbjct: 597  SMRDRMHPPRMSAPSCIVPP---LEQLVIRPHIVPLLPNFHGMESENPYAHIKEFEEVCN 653

Query: 701  TVKLQQFSDEAIKLKLFPFSLKEKAKSWFHTLPSNSIATWERLCIVFLKNFFPNHKATAF 880
            T +    S + ++LKLFPF+LK+KAK W ++L   SI  W  L   FLK +FP H+    
Sbjct: 654  TFREGGASIDLMRLKLFPFTLKDKAKIWLNSLRPRSIRNWVDLQAEFLKKYFPTHRTNGL 713

Query: 881  RKVISSFCQNEGESLWKCMERFKDILLQCPNHGLEKGRLVQIFYEGLDFNSKAMVETMST 1060
            ++ IS+F   E E   +C ER+ + +  CP+HG +   LV  FY+G+  + K ++ETM  
Sbjct: 714  KRQISNFSAKENEKFHECWERYMEAINACPHHGFDTWLLVSYFYDGMSSSMKQILETMCG 773

Query: 1061 GDFCDKTVDDAWSFLEDVAEKVQQWE--TSREPKKVASSTTKN---AMFHVDKDFDANAK 1225
             DF  K  D+A  FL  VAE  + W+   SRE  K  S  T+N    ++ +++D D  AK
Sbjct: 774  RDFMSKNPDEAMDFLSYVAEVSRGWDEPNSREKGKFPSQQTQNPKAGIYMLNEDVDMKAK 833

Query: 1226 IAALVRRVEALELEKETKSPA-QVNNVETPGCLLCDSLDHVIDNCPGVTA-------QVN 1381
            +A L RR+E LEL+K+ +  A     V    C +C S DHV+D CP + A       QVN
Sbjct: 834  VATLARRLEELELKKKHEVQAISDTQVHVMPCTICQSCDHVVDECPTMPAVREMLGDQVN 893

Query: 1382 AFNTYQXXXXXXXXXXXXXQGWRNNPNLSWSKGIHQGGPVGNSNPVPQYAPQ-----PPK 1546
                ++               WRN+PN SW                P Y PQ     P +
Sbjct: 894  VVGQFR-PNNNASYGNTYNSSWRNHPNFSWKP------------RPPPYQPQSQTQAPQQ 940

Query: 1547 LSPIEEAIAQLS---------QNAMKFQATTQ-QFMQASQL-----ATQDNAQAIRKIEV 1681
             S +E+AI  LS         Q A+  Q   + + +++SQ+        D +Q I  I+ 
Sbjct: 941  TSLVEQAIVNLSKVMGDFVGEQKAINSQLHQKIENVESSQIKRMEGMQNDLSQKIDNIQY 1000

Query: 1682 TIGQIANTLNERDKGKFPSQPVANPNGQHEVGSNLSQGHHHEQVKSITTLRSGKHVD--- 1852
            +I ++ N     +KGKFPSQP  NP G HEV +   +  +  +VK++ TLRSGK VD   
Sbjct: 1001 SISRLTNLNTVNEKGKFPSQPSQNPKGVHEVETXDGESSNLREVKAVITLRSGKEVDQPL 1060

Query: 1853 -NKVETPRVEVRSDLGERESEESDISGPHASEAS---RQPSIPVESSPVPHYIPKAPFPQ 2020
             N      +  +  L +  + + + SG  ++  S    +P I ++   +  +IP  PFPQ
Sbjct: 1061 PNMGHDEELMAKRPLIKESNNQEEKSGKKSASKSSIEEEPRIVIKEDMMKKHIP-PPFPQ 1119

Query: 2021 RLVQVTKGIQSNEILDVFKKVHINIPFLEAIKQ 2119
             L    +   S+EIL+V ++V +NIP L+ IKQ
Sbjct: 1120 ALHGKKEIKNSSEILEVLRQVKVNIPLLDMIKQ 1152