BLASTX nr result

ID: Coptis25_contig00005036 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00005036
         (700 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004148749.1| PREDICTED: syntaxin-22-like [Cucumis sativus]      96   7e-18
ref|XP_002304351.1| predicted protein [Populus trichocarpa] gi|2...    94   3e-17
gb|ABD65159.1| syntaxin, putative [Brassica oleracea]                  91   4e-17
dbj|BAH03479.1| syntaxin [Nicotiana tabacum]                           93   4e-17
ref|XP_002326741.1| predicted protein [Populus trichocarpa] gi|2...    93   6e-17

>ref|XP_004148749.1| PREDICTED: syntaxin-22-like [Cucumis sativus]
          Length = 274

 Score = 95.9 bits (237), Expect = 7e-18
 Identities = 53/82 (64%), Positives = 57/82 (69%)
 Frame = -1

Query: 700 RQEVLLLDNEIVFNEAXXXXXXXXXXXXXXXXXXXXXIFKDLAVLVHEQGAMIDDIDSNI 521
           RQEVLLLDNEI FNEA                     IFKDLAVLVHEQGAMIDDI SNI
Sbjct: 167 RQEVLLLDNEIAFNEAIIEEREQGIHEIQQQIGEVNEIFKDLAVLVHEQGAMIDDIGSNI 226

Query: 520 ESSHAATAQGTSHLVKASKTQK 455
           E +HAAT+QGT+ LVKASKTQ+
Sbjct: 227 EGAHAATSQGTTQLVKASKTQR 248


>ref|XP_002304351.1| predicted protein [Populus trichocarpa] gi|222841783|gb|EEE79330.1|
           predicted protein [Populus trichocarpa]
          Length = 261

 Score = 94.0 bits (232), Expect = 3e-17
 Identities = 53/82 (64%), Positives = 58/82 (70%)
 Frame = -1

Query: 700 RQEVLLLDNEIVFNEAXXXXXXXXXXXXXXXXXXXXXIFKDLAVLVHEQGAMIDDIDSNI 521
           RQEVLLLDNEIVFNEA                     IFKDLAVLVHEQGAMIDDI S+I
Sbjct: 167 RQEVLLLDNEIVFNEAIIEEREQGIHEIQQQIGEVNEIFKDLAVLVHEQGAMIDDIGSHI 226

Query: 520 ESSHAATAQGTSHLVKASKTQK 455
           ES+ AAT+QGTS LVKA+KTQ+
Sbjct: 227 ESAQAATSQGTSQLVKAAKTQR 248


>gb|ABD65159.1| syntaxin, putative [Brassica oleracea]
          Length = 303

 Score = 91.3 bits (225), Expect(2) = 4e-17
 Identities = 49/82 (59%), Positives = 57/82 (69%)
 Frame = -1

Query: 700 RQEVLLLDNEIVFNEAXXXXXXXXXXXXXXXXXXXXXIFKDLAVLVHEQGAMIDDIDSNI 521
           RQE++LLDNEIVFNEA                     IFKDLAVLVH+QG MIDDI ++I
Sbjct: 170 RQELVLLDNEIVFNEAIIEEREQGIQEIQQQIGEVHEIFKDLAVLVHDQGTMIDDIGTHI 229

Query: 520 ESSHAATAQGTSHLVKASKTQK 455
           ++SHAATAQG SHL KASKTQ+
Sbjct: 230 DNSHAATAQGRSHLAKASKTQR 251



 Score = 22.7 bits (47), Expect(2) = 4e-17
 Identities = 10/22 (45%), Positives = 12/22 (54%)
 Frame = -3

Query: 365 LLALGHIWNCAHNCDHSPDELI 300
           +LA G  WN   +C HS   LI
Sbjct: 278 VLAYGDFWNRTPDCYHSARGLI 299


>dbj|BAH03479.1| syntaxin [Nicotiana tabacum]
          Length = 272

 Score = 93.2 bits (230), Expect = 4e-17
 Identities = 51/82 (62%), Positives = 56/82 (68%)
 Frame = -1

Query: 700 RQEVLLLDNEIVFNEAXXXXXXXXXXXXXXXXXXXXXIFKDLAVLVHEQGAMIDDIDSNI 521
           RQEVLLLDNEI FNEA                     IFKDLAVLVHEQGAMIDDI SN+
Sbjct: 165 RQEVLLLDNEIAFNEAIIEEREQGIQEIQQQIGEVNEIFKDLAVLVHEQGAMIDDIGSNV 224

Query: 520 ESSHAATAQGTSHLVKASKTQK 455
           E++HAATAQG S L KA+KTQ+
Sbjct: 225 ENAHAATAQGRSQLAKAAKTQR 246


>ref|XP_002326741.1| predicted protein [Populus trichocarpa] gi|222834063|gb|EEE72540.1|
           predicted protein [Populus trichocarpa]
          Length = 274

 Score = 92.8 bits (229), Expect = 6e-17
 Identities = 52/82 (63%), Positives = 56/82 (68%)
 Frame = -1

Query: 700 RQEVLLLDNEIVFNEAXXXXXXXXXXXXXXXXXXXXXIFKDLAVLVHEQGAMIDDIDSNI 521
           RQEVLLLDNEI FNEA                     IFKDLAVLVHEQG MIDDI S+I
Sbjct: 167 RQEVLLLDNEIAFNEAVIEEREQGIHEIQQQIGEVNEIFKDLAVLVHEQGTMIDDIGSHI 226

Query: 520 ESSHAATAQGTSHLVKASKTQK 455
           E+S AATAQG SHLVKA+KTQ+
Sbjct: 227 ENSQAATAQGKSHLVKAAKTQR 248


Top