BLASTX nr result
ID: Coptis25_contig00005036
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00005036 (700 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_004148749.1| PREDICTED: syntaxin-22-like [Cucumis sativus] 96 7e-18 ref|XP_002304351.1| predicted protein [Populus trichocarpa] gi|2... 94 3e-17 gb|ABD65159.1| syntaxin, putative [Brassica oleracea] 91 4e-17 dbj|BAH03479.1| syntaxin [Nicotiana tabacum] 93 4e-17 ref|XP_002326741.1| predicted protein [Populus trichocarpa] gi|2... 93 6e-17 >ref|XP_004148749.1| PREDICTED: syntaxin-22-like [Cucumis sativus] Length = 274 Score = 95.9 bits (237), Expect = 7e-18 Identities = 53/82 (64%), Positives = 57/82 (69%) Frame = -1 Query: 700 RQEVLLLDNEIVFNEAXXXXXXXXXXXXXXXXXXXXXIFKDLAVLVHEQGAMIDDIDSNI 521 RQEVLLLDNEI FNEA IFKDLAVLVHEQGAMIDDI SNI Sbjct: 167 RQEVLLLDNEIAFNEAIIEEREQGIHEIQQQIGEVNEIFKDLAVLVHEQGAMIDDIGSNI 226 Query: 520 ESSHAATAQGTSHLVKASKTQK 455 E +HAAT+QGT+ LVKASKTQ+ Sbjct: 227 EGAHAATSQGTTQLVKASKTQR 248 >ref|XP_002304351.1| predicted protein [Populus trichocarpa] gi|222841783|gb|EEE79330.1| predicted protein [Populus trichocarpa] Length = 261 Score = 94.0 bits (232), Expect = 3e-17 Identities = 53/82 (64%), Positives = 58/82 (70%) Frame = -1 Query: 700 RQEVLLLDNEIVFNEAXXXXXXXXXXXXXXXXXXXXXIFKDLAVLVHEQGAMIDDIDSNI 521 RQEVLLLDNEIVFNEA IFKDLAVLVHEQGAMIDDI S+I Sbjct: 167 RQEVLLLDNEIVFNEAIIEEREQGIHEIQQQIGEVNEIFKDLAVLVHEQGAMIDDIGSHI 226 Query: 520 ESSHAATAQGTSHLVKASKTQK 455 ES+ AAT+QGTS LVKA+KTQ+ Sbjct: 227 ESAQAATSQGTSQLVKAAKTQR 248 >gb|ABD65159.1| syntaxin, putative [Brassica oleracea] Length = 303 Score = 91.3 bits (225), Expect(2) = 4e-17 Identities = 49/82 (59%), Positives = 57/82 (69%) Frame = -1 Query: 700 RQEVLLLDNEIVFNEAXXXXXXXXXXXXXXXXXXXXXIFKDLAVLVHEQGAMIDDIDSNI 521 RQE++LLDNEIVFNEA IFKDLAVLVH+QG MIDDI ++I Sbjct: 170 RQELVLLDNEIVFNEAIIEEREQGIQEIQQQIGEVHEIFKDLAVLVHDQGTMIDDIGTHI 229 Query: 520 ESSHAATAQGTSHLVKASKTQK 455 ++SHAATAQG SHL KASKTQ+ Sbjct: 230 DNSHAATAQGRSHLAKASKTQR 251 Score = 22.7 bits (47), Expect(2) = 4e-17 Identities = 10/22 (45%), Positives = 12/22 (54%) Frame = -3 Query: 365 LLALGHIWNCAHNCDHSPDELI 300 +LA G WN +C HS LI Sbjct: 278 VLAYGDFWNRTPDCYHSARGLI 299 >dbj|BAH03479.1| syntaxin [Nicotiana tabacum] Length = 272 Score = 93.2 bits (230), Expect = 4e-17 Identities = 51/82 (62%), Positives = 56/82 (68%) Frame = -1 Query: 700 RQEVLLLDNEIVFNEAXXXXXXXXXXXXXXXXXXXXXIFKDLAVLVHEQGAMIDDIDSNI 521 RQEVLLLDNEI FNEA IFKDLAVLVHEQGAMIDDI SN+ Sbjct: 165 RQEVLLLDNEIAFNEAIIEEREQGIQEIQQQIGEVNEIFKDLAVLVHEQGAMIDDIGSNV 224 Query: 520 ESSHAATAQGTSHLVKASKTQK 455 E++HAATAQG S L KA+KTQ+ Sbjct: 225 ENAHAATAQGRSQLAKAAKTQR 246 >ref|XP_002326741.1| predicted protein [Populus trichocarpa] gi|222834063|gb|EEE72540.1| predicted protein [Populus trichocarpa] Length = 274 Score = 92.8 bits (229), Expect = 6e-17 Identities = 52/82 (63%), Positives = 56/82 (68%) Frame = -1 Query: 700 RQEVLLLDNEIVFNEAXXXXXXXXXXXXXXXXXXXXXIFKDLAVLVHEQGAMIDDIDSNI 521 RQEVLLLDNEI FNEA IFKDLAVLVHEQG MIDDI S+I Sbjct: 167 RQEVLLLDNEIAFNEAVIEEREQGIHEIQQQIGEVNEIFKDLAVLVHEQGTMIDDIGSHI 226 Query: 520 ESSHAATAQGTSHLVKASKTQK 455 E+S AATAQG SHLVKA+KTQ+ Sbjct: 227 ENSQAATAQGKSHLVKAAKTQR 248