BLASTX nr result

ID: Coptis25_contig00005033 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00005033
         (917 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAC49278.1| sterol delta-7 reductase [Arabidopsis thaliana]         74   6e-11
gb|ABA01480.1| sterol delta-7 reductase DWF5 [Gossypium hirsutum]      72   1e-10
ref|NP_175460.1| 7-dehydrocholesterol reductase [Arabidopsis tha...    72   2e-10
ref|XP_002894252.1| hypothetical protein ARALYDRAFT_474170 [Arab...    72   2e-10
ref|NP_001077693.1| 7-dehydrocholesterol reductase [Arabidopsis ...    72   2e-10

>gb|AAC49278.1| sterol delta-7 reductase [Arabidopsis thaliana]
          Length = 430

 Score = 73.6 bits (179), Expect = 6e-11
 Identities = 40/94 (42%), Positives = 55/94 (58%), Gaps = 2/94 (2%)
 Frame = -3

Query: 795 NGQVADSLFGDSTLMVVYV*QFFWWEVGMQQILHI--HRPGIYVCWGCLVWVVNPQYT*L 622
           NG+V+DS+  ++ LM+VYV +FFWWE G    + I   R G Y+CWGCLVWV +  YT  
Sbjct: 220 NGKVSDSMLVNTILMLVYVTKFFWWEAGYWNTMDIAHDRAGFYICWGCLVWVPS-VYTSP 278

Query: 621 HMNVSHLSIELWCGLLLYTFCMHSCKSLLCIYFK 520
            M + +  +EL   L +Y         +LCIY K
Sbjct: 279 GMYLVNHPVELGTQLAIYIL----VAGILCIYIK 308


>gb|ABA01480.1| sterol delta-7 reductase DWF5 [Gossypium hirsutum]
          Length = 437

 Score = 72.4 bits (176), Expect = 1e-10
 Identities = 40/92 (43%), Positives = 54/92 (58%), Gaps = 2/92 (2%)
 Frame = -3

Query: 795 NGQVADSLFGDSTLMVVYV*QFFWWEVGMQQILHI--HRPGIYVCWGCLVWVVNPQYT*L 622
           NG+V+DS+  ++TLM+VYV +FFWWE G    + I   R G Y+CWGCLVWV +  YT  
Sbjct: 225 NGKVSDSMLVNTTLMLVYVTKFFWWEAGYWNTMDIAHDRAGFYICWGCLVWVPS-VYTSP 283

Query: 621 HMNVSHLSIELWCGLLLYTFCMHSCKSLLCIY 526
            M + +  + L   L LY         +LCIY
Sbjct: 284 GMYLVNHPVNLGMQLALYIL----VAGVLCIY 311


>ref|NP_175460.1| 7-dehydrocholesterol reductase [Arabidopsis thaliana]
           gi|20140296|sp|Q9LDU6.1|ST7R_ARATH RecName:
           Full=7-dehydrocholesterol reductase; Short=7-DHC
           reductase; AltName: Full=Protein DWARF 5; AltName:
           Full=Sterol Delta(7)-reductase
           gi|7542561|gb|AAF63498.1|AF239701_1 sterol delta7
           reductase [Arabidopsis thaliana]
           gi|9454565|gb|AAF87888.1|AC012561_21 sterol delta7
           reductase [Arabidopsis thaliana]
           gi|20466246|gb|AAM20440.1| sterol delta7 reductase
           [Arabidopsis thaliana] gi|23198074|gb|AAN15564.1| sterol
           delta7 reductase [Arabidopsis thaliana]
           gi|110742801|dbj|BAE99303.1| sterol delta7 reductase
           [Arabidopsis thaliana] gi|332194426|gb|AEE32547.1|
           7-dehydrocholesterol reductase [Arabidopsis thaliana]
          Length = 432

 Score = 71.6 bits (174), Expect = 2e-10
 Identities = 39/92 (42%), Positives = 54/92 (58%), Gaps = 2/92 (2%)
 Frame = -3

Query: 795 NGQVADSLFGDSTLMVVYV*QFFWWEVGMQQILHI--HRPGIYVCWGCLVWVVNPQYT*L 622
           NG+V+DS+  ++ LM+VYV +FFWWE G    + I   R G Y+CWGCLVWV +  YT  
Sbjct: 220 NGKVSDSMLVNTILMLVYVTKFFWWEAGYWNTMDIAHDRAGFYICWGCLVWVPS-VYTSP 278

Query: 621 HMNVSHLSIELWCGLLLYTFCMHSCKSLLCIY 526
            M + +  +EL   L +Y         +LCIY
Sbjct: 279 GMYLVNHPVELGTQLAIYIL----VAGILCIY 306


>ref|XP_002894252.1| hypothetical protein ARALYDRAFT_474170 [Arabidopsis lyrata subsp.
           lyrata] gi|297340094|gb|EFH70511.1| hypothetical protein
           ARALYDRAFT_474170 [Arabidopsis lyrata subsp. lyrata]
          Length = 432

 Score = 71.6 bits (174), Expect = 2e-10
 Identities = 39/92 (42%), Positives = 54/92 (58%), Gaps = 2/92 (2%)
 Frame = -3

Query: 795 NGQVADSLFGDSTLMVVYV*QFFWWEVGMQQILHI--HRPGIYVCWGCLVWVVNPQYT*L 622
           NG+V+DS+  ++ LM+VYV +FFWWE G    + I   R G Y+CWGCLVWV +  YT  
Sbjct: 220 NGKVSDSMLVNTILMLVYVTKFFWWEAGYWNTMDIAHDRAGFYICWGCLVWVPS-VYTSP 278

Query: 621 HMNVSHLSIELWCGLLLYTFCMHSCKSLLCIY 526
            M + +  +EL   L +Y         +LCIY
Sbjct: 279 GMYLVNHPVELGTQLAIYIL----VAGILCIY 306


>ref|NP_001077693.1| 7-dehydrocholesterol reductase [Arabidopsis thaliana]
           gi|332194427|gb|AEE32548.1| 7-dehydrocholesterol
           reductase [Arabidopsis thaliana]
          Length = 431

 Score = 71.6 bits (174), Expect = 2e-10
 Identities = 39/92 (42%), Positives = 54/92 (58%), Gaps = 2/92 (2%)
 Frame = -3

Query: 795 NGQVADSLFGDSTLMVVYV*QFFWWEVGMQQILHI--HRPGIYVCWGCLVWVVNPQYT*L 622
           NG+V+DS+  ++ LM+VYV +FFWWE G    + I   R G Y+CWGCLVWV +  YT  
Sbjct: 219 NGKVSDSMLVNTILMLVYVTKFFWWEAGYWNTMDIAHDRAGFYICWGCLVWVPS-VYTSP 277

Query: 621 HMNVSHLSIELWCGLLLYTFCMHSCKSLLCIY 526
            M + +  +EL   L +Y         +LCIY
Sbjct: 278 GMYLVNHPVELGTQLAIYIL----VAGILCIY 305


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