BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00005029
         (1138 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002519561.1| conserved hypothetical protein [Ricinus comm...   283   6e-74
ref|XP_003634670.1| PREDICTED: transcription factor TCP4-like [V...   271   2e-70
dbj|BAJ07175.1| MdTCP4A [Malus x domestica]                           264   3e-68
ref|XP_004137216.1| PREDICTED: transcription factor TCP4-like [C...   254   2e-65
gb|ADL36833.1| TCP domain class transcription factor [Malus x do...   254   3e-65

>ref|XP_002519561.1| conserved hypothetical protein [Ricinus communis]
            gi|223541258|gb|EEF42810.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 595

 Score =  283 bits (724), Expect = 6e-74
 Identities = 178/356 (50%), Positives = 208/356 (58%), Gaps = 22/356 (6%)
 Frame = -1

Query: 1003 LFYGREVEGSSLEAQPPKKRSYFPLSEE----QRRSIEYARFGEKMGDNPQQPQQTTSRL 836
            L+   +++   +   PPKKRS+F  S      Q +  EYAR   KMG++ +Q QQ  +R 
Sbjct: 134  LYQRLDLQQLQIPLHPPKKRSHFSSSSSTSIIQEQGFEYAR---KMGESQRQHQQQPARS 190

Query: 835  GLLKSSXXXXXXXXXXXXXXVRSTGRKDRHSKVCTAKGPRDRRVRLSAHTAIQFYDVQDR 656
              L +               VRSTGRKDRHSKVCTAKGPRDRRVRLSAHTAIQFYDVQDR
Sbjct: 191  SRLGTRNTVGEIVEVQGGHIVRSTGRKDRHSKVCTAKGPRDRRVRLSAHTAIQFYDVQDR 250

Query: 655  LGYDRPSKAVDWLIKKAKSAIDELAELPPWRPSATTPTSTACXXXXXXXXXXXXXXGDGF 476
            LGYDRPSKAVDWLIKKAK+AIDEL ELP W P+      +                 D  
Sbjct: 251  LGYDRPSKAVDWLIKKAKAAIDELEELPAWNPTTAVAKDSTQIGDERDYQLPVENNLDAI 310

Query: 475  AGSSKRPLG------VEQDGSGYGFQQQHLSNNPTSSSGFLPPSLDSDAIADTIKSFFPI 314
             G++K P           D  G   QQQHL+ NP +SS FLPPSLDSDAIADTIKSFFP+
Sbjct: 311  GGNTKTPAATATTTTTAADVQGIE-QQQHLAENPNNSSSFLPPSLDSDAIADTIKSFFPM 369

Query: 313  AASTTSPPIHFQNYPPDLLSRTTSSHTQDLRLSLQSFQDPILLXXXXXXXXXXXXXXXXQ 134
             A  T+    FQ+YPPDLLSR TSS  QDLRLSL SFQ+PILL                Q
Sbjct: 370  GA--TAETTQFQSYPPDLLSR-TSSQNQDLRLSLHSFQEPILL--QQQHHHHGHAQNEQQ 424

Query: 133  TLFSNSSP---LPFETNSTSWSD--QQHQ-EIGRFQRMVAWNA------GTDAGSG 2
             L S+ +      F+ +S  WS+  Q H  +I RFQRM+AWNA       TD GSG
Sbjct: 425  VLLSSGTAAHHFGFDGSSAGWSEHHQNHSADIARFQRMIAWNAAAAAVDATDTGSG 480


>ref|XP_003634670.1| PREDICTED: transcription factor TCP4-like [Vitis vinifera]
          Length = 398

 Score =  271 bits (693), Expect = 2e-70
 Identities = 164/303 (54%), Positives = 188/303 (62%), Gaps = 10/303 (3%)
 Frame = -1

Query: 880 MGDNPQQPQQ-TTSRLGLLKSSXXXXXXXXXXXXXXVRSTGRKDRHSKVCTAKGPRDRRV 704
           MG+  QQ Q  ++SR+G+   S              VRSTGRKDRHSKVCTAKGPRDRRV
Sbjct: 1   MGETHQQQQAASSSRMGM--RSVVGGEIVEVQGGHIVRSTGRKDRHSKVCTAKGPRDRRV 58

Query: 703 RLSAHTAIQFYDVQDRLGYDRPSKAVDWLIKKAKSAIDELAELPPWRPSATTPTSTACXX 524
           RLSAHTAIQFYDVQDRLGYDRPSKAVDWLIKKAK+AIDELA+LP W P+A T T+ A   
Sbjct: 59  RLSAHTAIQFYDVQDRLGYDRPSKAVDWLIKKAKAAIDELAQLPAWHPTAITVTAAAAAA 118

Query: 523 XXXXXXXXXXXXGDGFAGSSKRPLGVEQDGSGYGFQQQHLSN-------NPTSSSGFLPP 365
                               + P  V  DG     Q  H +N       NP  +  FLPP
Sbjct: 119 TTATTTHHQE--------DEENPNQVAIDGDDDRVQMHHGNNPDPNPNPNPNQNPSFLPP 170

Query: 364 SLDSDAIADTIKSFFPIAAS--TTSPPIHFQNYPPDLLSRTTSSHTQDLRLSLQSFQDPI 191
           SLDSD IADTIKSFFP+ AS  ++S  + FQ+YPPDLLSR TSS  QDLRLSLQSFQDP+
Sbjct: 171 SLDSDTIADTIKSFFPMGASGESSSSSVQFQSYPPDLLSR-TSSQNQDLRLSLQSFQDPM 229

Query: 190 LLXXXXXXXXXXXXXXXXQTLFSNSSPLPFETNSTSWSDQQHQEIGRFQRMVAWNAGTDA 11
           LL                Q LF   SPL F+  S +WS+    E+GRFQRMVAWNAG ++
Sbjct: 230 LL---HHHHTQSHSHHQQQALF---SPLGFDAPSAAWSEHHAAEMGRFQRMVAWNAGAES 283

Query: 10  GSG 2
             G
Sbjct: 284 SGG 286


>dbj|BAJ07175.1| MdTCP4A [Malus x domestica]
          Length = 431

 Score =  264 bits (675), Expect = 3e-68
 Identities = 164/308 (53%), Positives = 190/308 (61%), Gaps = 21/308 (6%)
 Frame = -1

Query: 880 MGDNPQQPQQTTSRLGLLKSSXXXXXXXXXXXXXXV-----RSTGRKDRHSKVCTAKGPR 716
           MGD+      T+SRLG+   S                    R+TGRKDRHSKVCTAKGPR
Sbjct: 1   MGDSHHHQATTSSRLGIRPPSSGAGVVSTDIVEVVRGSHIVRATGRKDRHSKVCTAKGPR 60

Query: 715 DRRVRLSAHTAIQFYDVQDRLGYDRPSKAVDWLIKKAKSAIDELAELPPWRPSATTPTST 536
           DRRVRL+AHTAIQFYDVQDRLGYDRPSKAVDWLIKKAK+AIDEL ELP W P +T+ T++
Sbjct: 61  DRRVRLAAHTAIQFYDVQDRLGYDRPSKAVDWLIKKAKAAIDELDELPSWNPHSTSTTAS 120

Query: 535 AC---XXXXXXXXXXXXXXGDGFAGSSKRPLGVEQDGSGYGFQQQHLSNNPTSSSGFLPP 365
                               D    +++R   V     G G  +Q +  NP S+S FLPP
Sbjct: 121 VPGMETHNPTTTGIHCFAGVDAIGSANQRTTMV-----GSGVSEQKIVQNPNSNSTFLPP 175

Query: 364 SLDSDAIADTIKSFFP-------IAASTTSPPIHF-QNYPPDLLSRTTSSHTQDLRLSLQ 209
           SLDSDAIADTIKSFFP        AA   S  I F QNYPPDLLSR TSS +QDLRLSLQ
Sbjct: 176 SLDSDAIADTIKSFFPTGASAIAAAAEAPSSTIQFHQNYPPDLLSR-TSSQSQDLRLSLQ 234

Query: 208 SFQDPILLXXXXXXXXXXXXXXXXQTLFSNS-SPLPFETNSTSWSD----QQHQEIGRFQ 44
           SFQDPILL                Q+LFS S +PL F+ +S +W++    QQ QE+ RFQ
Sbjct: 235 SFQDPILL-----HQHHAQTHQNEQSLFSGSQNPLGFDGSSAAWAEHHHNQQQQEMNRFQ 289

Query: 43  RMVAWNAG 20
           RMVAWN+G
Sbjct: 290 RMVAWNSG 297


>ref|XP_004137216.1| PREDICTED: transcription factor TCP4-like [Cucumis sativus]
           gi|449531426|ref|XP_004172687.1| PREDICTED:
           transcription factor TCP4-like [Cucumis sativus]
          Length = 428

 Score =  254 bits (650), Expect = 2e-65
 Identities = 164/312 (52%), Positives = 188/312 (60%), Gaps = 19/312 (6%)
 Frame = -1

Query: 880 MGDNPQQPQQTTSRLGLLKSSXXXXXXXXXXXXXXVRSTGRKDRHSKVCTAKGPRDRRVR 701
           MG++ +Q   T+SRLG+ ++               VRSTGRKDRHSKVCTAKGPRDRRVR
Sbjct: 1   MGESHRQTS-TSSRLGM-RTGGGGGEIVEVQGGHIVRSTGRKDRHSKVCTAKGPRDRRVR 58

Query: 700 LSAHTAIQFYDVQDRLGYDRPSKAVDWLIKKAKSAIDELAELPPWRPSATTPTSTA--CX 527
           LSAHTAIQFYDVQDRLGYDRPSKAVDWLIKKAK+AIDELAELP W PS    ++      
Sbjct: 59  LSAHTAIQFYDVQDRLGYDRPSKAVDWLIKKAKAAIDELAELPAWHPSTGNASTQGEEQQ 118

Query: 526 XXXXXXXXXXXXXGDGFAGSSKR---PLGVEQDGSGYGFQQ-QH--LSNNPTSS-SGFLP 368
                         D F  +  R    LG +   S +  Q  QH  +   P SS S FLP
Sbjct: 119 SLNDENENLLSVQRDVFNSTGNRRATVLGSDSRVSEFPLQNLQHTQMGEGPNSSTSSFLP 178

Query: 367 PSLDSDAIADTIKSFFPI-----AASTTSPPIHFQNYPPDLLSRTTSSHTQDLRLSLQSF 203
           PSLDSD+IADTIKSFFPI     AA TTS  I FQNYP DLLSR TSS  QDLRLSLQSF
Sbjct: 179 PSLDSDSIADTIKSFFPIGTSAAAAETTSSSIQFQNYPQDLLSR-TSSQNQDLRLSLQSF 237

Query: 202 QDPILLXXXXXXXXXXXXXXXXQTLFSNSSPLP-FETNSTSWSDQQH---QEIGRFQRMV 35
           QDPI +                  LFS ++PL  F+  +  WS+       EI RF R+ 
Sbjct: 238 QDPIAIHRHHHAQHQSQGHQNEHVLFSGTAPLSGFDVTTAGWSEHNSLNPAEISRFPRIT 297

Query: 34  AWNA-GTDAGSG 2
           +WNA G + GSG
Sbjct: 298 SWNASGAETGSG 309


>gb|ADL36833.1| TCP domain class transcription factor [Malus x domestica]
          Length = 435

 Score =  254 bits (649), Expect = 3e-65
 Identities = 155/272 (56%), Positives = 176/272 (64%), Gaps = 17/272 (6%)
 Frame = -1

Query: 772 RSTGRKDRHSKVCTAKGPRDRRVRLSAHTAIQFYDVQDRLGYDRPSKAVDWLIKKAKSAI 593
           R+TGRKDRHSKVCTAKGPRDRRVRL+AHTAIQFYDVQDRLGYDRPSKAVDWLIKKAK+AI
Sbjct: 46  RATGRKDRHSKVCTAKGPRDRRVRLAAHTAIQFYDVQDRLGYDRPSKAVDWLIKKAKAAI 105

Query: 592 DELAELPPWRPS--ATTPTSTACXXXXXXXXXXXXXXGDGFAGSSKRPLGVEQDGSGYGF 419
           DEL ELP W P   +TT    A                    GS+ R   V     G G 
Sbjct: 106 DELEELPSWNPHSISTTAAVPAMETQNPSATGIHCFAAVDAIGSANRRTMV-----GSGV 160

Query: 418 QQQHLSNNPTSSSGFLPPSLDSDAIADTIKSFFPI-------AASTTSPPIHF-QNYPPD 263
            +Q  + NP S+S FLPPSLDSDAIADTIKSFFP+       AA + S  I F QNYPPD
Sbjct: 161 SEQQFAQNPNSNSTFLPPSLDSDAIADTIKSFFPMGASAAAAAAESPSSTIQFHQNYPPD 220

Query: 262 LLSRTTSSHTQDLRLSLQSFQDPILL--XXXXXXXXXXXXXXXXQTLFSNS-SPLPFETN 92
           LLS+  SS +QDLRLSLQSFQDPILL                  QTLFS S + L F+ +
Sbjct: 221 LLSK-ASSQSQDLRLSLQSFQDPILLHHHDAQNQHHHAQTHQNEQTLFSGSQNQLGFDGS 279

Query: 91  STSWSD----QQHQEIGRFQRMVAWNAGTDAG 8
             SW++    QQ QE+ RFQRMVAW++G + G
Sbjct: 280 PGSWAEHHHNQQQQEMNRFQRMVAWDSGGNGG 311