BLASTX nr result

ID: Coptis25_contig00005021 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00005021
         (1013 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281488.1| PREDICTED: tRNA (guanine-N(1)-)-methyltransf...   277   e-122
emb|CBI28113.3| unnamed protein product [Vitis vinifera]              268   e-120
sp|F6HH45.1|TRM52_VITVI RecName: Full=tRNA (guanine(37)-N1)-meth...   268   e-120
ref|XP_004139336.1| PREDICTED: tRNA (guanine(37)-N1)-methyltrans...   267   e-119
ref|XP_003549801.1| PREDICTED: LOW QUALITY PROTEIN: tRNA (guanin...   270   e-119

>ref|XP_002281488.1| PREDICTED: tRNA (guanine-N(1)-)-methyltransferase,
           mitochondrial-like [Vitis vinifera]
          Length = 506

 Score =  277 bits (709), Expect(2) = e-122
 Identities = 130/174 (74%), Positives = 152/174 (87%)
 Frame = +2

Query: 47  LDERKFELKLQLWALCIPRELCKHVTRLLNGYMLDKPRIKPIIEDPTCDKNRYVVLSDKV 226
           LDE KF+L+L+LWAL IP +LCK  +R+LNGY+LDKPR+KPI EDPTC+ NRY++LS+++
Sbjct: 3   LDESKFDLQLKLWALRIPSQLCKVASRILNGYLLDKPRVKPITEDPTCETNRYIILSERI 62

Query: 227 QNSDLSEIPAQTLFVLKDLCKFDVVPYSLSLGYSYWGVDHILKQILPPGVEVPSSFETIG 406
           +N DLS+IP      LK LCK +VVPYSL+LGYSYW  DH+LKQILP GVEVPSSFETIG
Sbjct: 63  KNPDLSDIPEDKRDELKVLCKIEVVPYSLTLGYSYWSADHVLKQILPDGVEVPSSFETIG 122

Query: 407 HIAHLNITGELLSYKDVIAKVIYDKNQPRIKTVVNKVGSISNEFRVPKFEVLAG 568
           HIAHLNITGELL YKDVIAKVIYDKN PRIKTVVNKVG+I+NEFRVPKFE+L G
Sbjct: 123 HIAHLNITGELLPYKDVIAKVIYDKNYPRIKTVVNKVGTITNEFRVPKFEILVG 176



 Score =  189 bits (480), Expect(2) = e-122
 Identities = 88/108 (81%), Positives = 96/108 (88%)
 Frame = +3

Query: 615 DMVTEVKQYGATFKLDYGLVYWNSRLEHEHIRLISLFLDGDIICDMFSGIGPFVIPAAQK 794
           DMVTEVKQY ATFKLDY LVYWNSRLEHEH+RL+S F  G IICDMFSG+GPF IPAAQK
Sbjct: 179 DMVTEVKQYRATFKLDYSLVYWNSRLEHEHMRLVSQFRPGQIICDMFSGVGPFAIPAAQK 238

Query: 795 GCIVYANDLNPDSVRYLKINAEINKVDDRVCAYNMDARAFICHLMQVP 938
           GC+VYANDLNPDS+RYLKINA+INKVDD + AYNMDAR FI  LM+VP
Sbjct: 239 GCLVYANDLNPDSIRYLKINAKINKVDDNIWAYNMDARKFISQLMEVP 286


>emb|CBI28113.3| unnamed protein product [Vitis vinifera]
          Length = 983

 Score =  268 bits (686), Expect(2) = e-120
 Identities = 129/178 (72%), Positives = 151/178 (84%), Gaps = 4/178 (2%)
 Frame = +2

Query: 47  LDERKFELKLQLWALCIPRELCKHVTRLLNGYMLDKPRIKPIIEDPTCDKNRYVVLSDKV 226
           LDE KF+L+L+LWAL IP +LCK  +R+LNGY+LDKPR+KPI EDPTC+ NRY++LS+++
Sbjct: 3   LDESKFDLQLKLWALRIPSQLCKVASRILNGYLLDKPRVKPITEDPTCETNRYIILSERI 62

Query: 227 QNSDLSEIPAQTLFVLKDLCKFDVVPYSLSLGYSYWGVDHILKQILPPGVEVPSSFETIG 406
           +N DLS+IP      LK LCK +VVPYSL+LGYSYW  DH+LKQILP GVEVPSSFETI 
Sbjct: 63  KNPDLSDIPEDKRDELKVLCKIEVVPYSLTLGYSYWSADHVLKQILPDGVEVPSSFETIT 122

Query: 407 ----HIAHLNITGELLSYKDVIAKVIYDKNQPRIKTVVNKVGSISNEFRVPKFEVLAG 568
               HIAHLNITGELL YKDVIAKVIYDKN PRIKTVVNKVG+I+NEFRVPKFE+L G
Sbjct: 123 FSLCHIAHLNITGELLPYKDVIAKVIYDKNYPRIKTVVNKVGTITNEFRVPKFEILVG 180



 Score =  189 bits (480), Expect(2) = e-120
 Identities = 88/108 (81%), Positives = 96/108 (88%)
 Frame = +3

Query: 615 DMVTEVKQYGATFKLDYGLVYWNSRLEHEHIRLISLFLDGDIICDMFSGIGPFVIPAAQK 794
           DMVTEVKQY ATFKLDY LVYWNSRLEHEH+RL+S F  G IICDMFSG+GPF IPAAQK
Sbjct: 183 DMVTEVKQYRATFKLDYSLVYWNSRLEHEHMRLVSQFRPGQIICDMFSGVGPFAIPAAQK 242

Query: 795 GCIVYANDLNPDSVRYLKINAEINKVDDRVCAYNMDARAFICHLMQVP 938
           GC+VYANDLNPDS+RYLKINA+INKVDD + AYNMDAR FI  LM+VP
Sbjct: 243 GCLVYANDLNPDSIRYLKINAKINKVDDNIWAYNMDARKFISQLMEVP 290


>sp|F6HH45.1|TRM52_VITVI RecName: Full=tRNA (guanine(37)-N1)-methyltransferase 2; AltName:
           Full=M1G-methyltransferase 2; AltName: Full=tRNA [GM37]
           methyltransferase 2; AltName: Full=tRNA
           methyltransferase 5 homolog 2
          Length = 510

 Score =  268 bits (686), Expect(2) = e-120
 Identities = 129/178 (72%), Positives = 151/178 (84%), Gaps = 4/178 (2%)
 Frame = +2

Query: 47  LDERKFELKLQLWALCIPRELCKHVTRLLNGYMLDKPRIKPIIEDPTCDKNRYVVLSDKV 226
           LDE KF+L+L+LWAL IP +LCK  +R+LNGY+LDKPR+KPI EDPTC+ NRY++LS+++
Sbjct: 3   LDESKFDLQLKLWALRIPSQLCKVASRILNGYLLDKPRVKPITEDPTCETNRYIILSERI 62

Query: 227 QNSDLSEIPAQTLFVLKDLCKFDVVPYSLSLGYSYWGVDHILKQILPPGVEVPSSFETIG 406
           +N DLS+IP      LK LCK +VVPYSL+LGYSYW  DH+LKQILP GVEVPSSFETI 
Sbjct: 63  KNPDLSDIPEDKRDELKVLCKIEVVPYSLTLGYSYWSADHVLKQILPDGVEVPSSFETIT 122

Query: 407 ----HIAHLNITGELLSYKDVIAKVIYDKNQPRIKTVVNKVGSISNEFRVPKFEVLAG 568
               HIAHLNITGELL YKDVIAKVIYDKN PRIKTVVNKVG+I+NEFRVPKFE+L G
Sbjct: 123 FSLCHIAHLNITGELLPYKDVIAKVIYDKNYPRIKTVVNKVGTITNEFRVPKFEILVG 180



 Score =  189 bits (480), Expect(2) = e-120
 Identities = 88/108 (81%), Positives = 96/108 (88%)
 Frame = +3

Query: 615 DMVTEVKQYGATFKLDYGLVYWNSRLEHEHIRLISLFLDGDIICDMFSGIGPFVIPAAQK 794
           DMVTEVKQY ATFKLDY LVYWNSRLEHEH+RL+S F  G IICDMFSG+GPF IPAAQK
Sbjct: 183 DMVTEVKQYRATFKLDYSLVYWNSRLEHEHMRLVSQFRPGQIICDMFSGVGPFAIPAAQK 242

Query: 795 GCIVYANDLNPDSVRYLKINAEINKVDDRVCAYNMDARAFICHLMQVP 938
           GC+VYANDLNPDS+RYLKINA+INKVDD + AYNMDAR FI  LM+VP
Sbjct: 243 GCLVYANDLNPDSIRYLKINAKINKVDDNIWAYNMDARKFISQLMEVP 290


>ref|XP_004139336.1| PREDICTED: tRNA (guanine(37)-N1)-methyltransferase 2-like [Cucumis
           sativus] gi|449518119|ref|XP_004166091.1| PREDICTED:
           tRNA (guanine(37)-N1)-methyltransferase 2-like [Cucumis
           sativus]
          Length = 497

 Score =  267 bits (683), Expect(2) = e-119
 Identities = 132/180 (73%), Positives = 148/180 (82%), Gaps = 6/180 (3%)
 Frame = +2

Query: 47  LDERKFELKLQLWALCIPRELCKHVTRLLNGYMLDKPRIKPIIEDPTCDKNRYVVLSDKV 226
           LDE KF++ L LWAL IPRELCK   ++LNGY++DKPRIKP+ EDPTCDKNRYV+LS+KV
Sbjct: 2   LDESKFDVHLNLWALRIPRELCKAAIKILNGYLIDKPRIKPVTEDPTCDKNRYVILSEKV 61

Query: 227 QNSDLSEIPAQTLFVLKDLCKFDVVPYSLSLGYSYWGVDHILKQILPPGVEVPSSFETI- 403
           Q  +LSEIP   L  LK LC F+ VPYSL+LGYSYWG DHILK+ILPP VEVPSSFETI 
Sbjct: 62  QTPELSEIPEMKLEELKGLCMFERVPYSLTLGYSYWGADHILKKILPPEVEVPSSFETIV 121

Query: 404 -----GHIAHLNITGELLSYKDVIAKVIYDKNQPRIKTVVNKVGSISNEFRVPKFEVLAG 568
                 H+AHLNI  ELL YKDVIAKVIYDKN PRIKTVVNKVGSI+NEFRVPKFE+L G
Sbjct: 122 KYSNPCHVAHLNIHDELLPYKDVIAKVIYDKNYPRIKTVVNKVGSITNEFRVPKFEILKG 181



 Score =  188 bits (478), Expect(2) = e-119
 Identities = 96/131 (73%), Positives = 105/131 (80%)
 Frame = +3

Query: 615  DMVTEVKQYGATFKLDYGLVYWNSRLEHEHIRLISLFLDGDIICDMFSGIGPFVIPAAQK 794
            DMVTEVKQYGATFKLDY LVYWNSRLEHEHIRL+SLF  G++ICDMF+GIGPF IPAAQK
Sbjct: 184  DMVTEVKQYGATFKLDYSLVYWNSRLEHEHIRLVSLFQPGEVICDMFAGIGPFAIPAAQK 243

Query: 795  GCIVYANDLNPDSVRYLKINAEINKVDDRVCAYNMDARAFICHLMQVPDCLETFSESERS 974
             CIVYANDLNPDS+RYLK+NAEINKV  RV  YN+DAR FI  LM VP   E+ SES  S
Sbjct: 244  ECIVYANDLNPDSIRYLKVNAEINKVSGRVHVYNLDARKFISQLMIVPP-NESNSESVTS 302

Query: 975  TVYMKEIPING 1007
             +   E  I G
Sbjct: 303  ILKACEKGIGG 313


>ref|XP_003549801.1| PREDICTED: LOW QUALITY PROTEIN: tRNA
           (guanine-N(1)-)-methyltransferase-like [Glycine max]
          Length = 472

 Score =  270 bits (691), Expect(2) = e-119
 Identities = 128/174 (73%), Positives = 149/174 (85%)
 Frame = +2

Query: 47  LDERKFELKLQLWALCIPRELCKHVTRLLNGYMLDKPRIKPIIEDPTCDKNRYVVLSDKV 226
           LDE KFE+ L+LWAL IP + CK  TR+LNGY+LDKPR+KPI EDPTCDKNRY++LSD V
Sbjct: 2   LDESKFEVHLKLWALRIPCQHCKLATRILNGYLLDKPRVKPIAEDPTCDKNRYLILSDNV 61

Query: 227 QNSDLSEIPAQTLFVLKDLCKFDVVPYSLSLGYSYWGVDHILKQILPPGVEVPSSFETIG 406
            N DLS+IP Q L  LK LC+ ++VPYSL+LGYS+W  DH+LKQILP GVEVPSSFETIG
Sbjct: 62  HNQDLSDIPKQKLDELKGLCEIEIVPYSLTLGYSHWSADHVLKQILPTGVEVPSSFETIG 121

Query: 407 HIAHLNITGELLSYKDVIAKVIYDKNQPRIKTVVNKVGSISNEFRVPKFEVLAG 568
            IAHLN+  ELL YKDVIAKVIYDKN PRIKT+VNKVG+I+NEFRVP+FE+LAG
Sbjct: 122 QIAHLNLHDELLPYKDVIAKVIYDKNYPRIKTIVNKVGTITNEFRVPEFEILAG 175



 Score =  184 bits (468), Expect(2) = e-119
 Identities = 88/119 (73%), Positives = 101/119 (84%), Gaps = 3/119 (2%)
 Frame = +3

Query: 615 DMVTEVKQYGATFKLDYGLVYWNSRLEHEHIRLISLFLDGDIICDMFSGIGPFVIPAAQK 794
           +M+TEVKQYGATF+LDY LVYWNSRLEHEH RL+S+F  G  ICDMF+GIGPF IPAAQK
Sbjct: 178 NMITEVKQYGATFRLDYRLVYWNSRLEHEHKRLVSMFQAGQTICDMFTGIGPFAIPAAQK 237

Query: 795 GCIVYANDLNPDSVRYLKINAEINKVDDRVCAYNMDARAFICHLMQVPD---CLETFSE 962
           GCIVYANDLNPDS+ YL+INA+INKVDDR+ AYNMDAR FI  +M+VP+    LET  E
Sbjct: 238 GCIVYANDLNPDSIHYLRINAKINKVDDRIYAYNMDARKFISQMMEVPNNEVTLETSHE 296


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