BLASTX nr result

ID: Coptis25_contig00005018 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00005018
         (1561 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002521607.1| conserved hypothetical protein [Ricinus comm...   523   e-146
emb|CBI17534.3| unnamed protein product [Vitis vinifera]              516   e-144
ref|XP_002310222.1| predicted protein [Populus trichocarpa] gi|2...   515   e-143
ref|XP_002327812.1| predicted protein [Populus trichocarpa] gi|2...   515   e-143
ref|XP_002267318.1| PREDICTED: uncharacterized protein LOC100253...   513   e-143

>ref|XP_002521607.1| conserved hypothetical protein [Ricinus communis]
            gi|223539285|gb|EEF40878.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 478

 Score =  523 bits (1348), Expect = e-146
 Identities = 258/398 (64%), Positives = 302/398 (75%)
 Frame = +2

Query: 194  ELEFGWKLVVGTTIGFXXXXXXXXXXXXXXXXXXPMLTLIIGFDPKSSTAISKCMIMGAA 373
            E+EF +K+VVGT +GF                  PMLTL+IGFDPKSSTAISKCMIMGAA
Sbjct: 80   EMEFNYKIVVGTIVGFLGAALGSVGGVGGGGIFVPMLTLLIGFDPKSSTAISKCMIMGAA 139

Query: 374  GSTVYYNLKLRHPTLDLPIIDYDLALLFQPMLMLGISIGVVFNIIFADWMVTILLIILFV 553
            GSTVYYN++LRHPTLD+P+IDYDLALLFQPMLMLGISIGV FN++FADWMVT+LLIILF+
Sbjct: 140  GSTVYYNMRLRHPTLDMPLIDYDLALLFQPMLMLGISIGVAFNVMFADWMVTVLLIILFI 199

Query: 554  GTSTKALFKGIETWKEETIMKKEAANSLVSESKQNDDSRQDYTPLPSGPAALRSDEVSLM 733
            GTSTKALFKGI+TWK+E++MKKEAA  L SESK ND   QDY PLPSGP AL  +E+SL 
Sbjct: 200  GTSTKALFKGIDTWKKESMMKKEAARQLESESKPNDGEGQDYKPLPSGPVALEDEEISLF 259

Query: 734  DNVYWKDFMLLLFVWVSFLAIQLVKTYAEKCSVEYWILISLQVPIAVSVSLYEAICLYKG 913
             N+YWK+  LL++VWV FLA+Q+VK+Y   CSV YWIL +LQVPIA SV+L+EAICL KG
Sbjct: 260  QNIYWKELALLVYVWVGFLAVQIVKSYVRTCSVAYWILNALQVPIAASVTLFEAICLRKG 319

Query: 914  NRVIASIGKETTNWKVHQLLLYCFCGITAXXXXXXXXXXXXXXXXXXXXXXXVPPQVXXX 1093
             RVIAS GKE TNWK HQ+LLYC CGI A                       +PPQV   
Sbjct: 320  TRVIASRGKEITNWKYHQILLYCSCGIIAGMVGGLLGLGGGFILGPLFLELGIPPQVASA 379

Query: 1094 XXXXXXXXXXXXXVIQYYLLKRFPVPYAAYFVLVATIAAFTGQHIVRKLIMLLGRASLII 1273
                         V+QYYLLKRFPVPYA +FVLVAT+AA  GQH+VRK+I +LGRAS+II
Sbjct: 380  TSTFAMVFSSSMSVVQYYLLKRFPVPYATFFVLVATVAALVGQHVVRKIIAILGRASIII 439

Query: 1274 FILALTIFVSAISLGGVGIANIVEKLVNHEHIGFESMC 1387
            FILALTIFVSAISLGGVGI ++VEKL N E++GFE++C
Sbjct: 440  FILALTIFVSAISLGGVGIVDMVEKLTNEEYMGFENLC 477


>emb|CBI17534.3| unnamed protein product [Vitis vinifera]
          Length = 481

 Score =  516 bits (1329), Expect = e-144
 Identities = 262/429 (61%), Positives = 314/429 (73%), Gaps = 7/429 (1%)
 Frame = +2

Query: 122  KNTEPRSISEA------SRLRIHGLIWIIQELEFGWKLVVGTTIGFXXXXXXXXXXXXXX 283
            KN EP  +S+       S    +  +W   +++FGWKLVV + IGF              
Sbjct: 52   KNKEPGFLSKVVHFLWQSGKSSYQHVW--PDMKFGWKLVVASIIGFFGAALGSVGGVGGG 109

Query: 284  XXXXPMLTLIIGFDPKSSTAISKCMIMGAAGSTVYYNLKLRHPTLDLPIIDYDLALLFQP 463
                PMLTLI+GFDPKSSTAISKCMIMGAAGSTVYYN++LRHPTLD+PIIDYDLALLFQP
Sbjct: 110  GIFVPMLTLIVGFDPKSSTAISKCMIMGAAGSTVYYNMRLRHPTLDMPIIDYDLALLFQP 169

Query: 464  MLMLGISIGVVFNIIFADWMVTILLIILFVGTSTKALFKGIETWKEETIMKKEAANSLVS 643
            MLMLGISIGV FN+IFADWMVT+LLIILF+GTSTKALFKGIETWK+ETIMKKEAA  L +
Sbjct: 170  MLMLGISIGVAFNVIFADWMVTVLLIILFLGTSTKALFKGIETWKKETIMKKEAARLLEA 229

Query: 644  ESKQNDDS-RQDYTPLPSGPAALRSDEVSLMDNVYWKDFMLLLFVWVSFLAIQLVKTYAE 820
            E+K  D++   DY PLPSGPA +R D V ++ N+ WK+  LL++VWV+FLA+Q+VKTY  
Sbjct: 230  ETKPTDNTGGGDYRPLPSGPATIRDDHVPVIYNICWKELALLVYVWVAFLAVQIVKTYTV 289

Query: 821  KCSVEYWILISLQVPIAVSVSLYEAICLYKGNRVIASIGKETTNWKVHQLLLYCFCGITA 1000
             CS+EYW+L  LQVPIA SVS+YEA+CLYKG RVIAS GKE TNWK+HQ+ LYC CGI A
Sbjct: 290  TCSIEYWVLNCLQVPIAASVSIYEAVCLYKGTRVIASKGKEVTNWKIHQIFLYCSCGIVA 349

Query: 1001 XXXXXXXXXXXXXXXXXXXXXXXVPPQVXXXXXXXXXXXXXXXXVIQYYLLKRFPVPYAA 1180
                                   +PPQV                V+QY+LL+RFPVPYA+
Sbjct: 350  GLVGGLLGLGGGFILGPLFLELGIPPQVASATSTFSMAFSSSMSVVQYHLLRRFPVPYAS 409

Query: 1181 YFVLVATIAAFTGQHIVRKLIMLLGRASLIIFILALTIFVSAISLGGVGIANIVEKLVNH 1360
            YFVLVATIAA  GQH+VRK+I L+GRAS+IIFILALTIF+SAISLGGVGI  +VEKL N+
Sbjct: 410  YFVLVATIAALVGQHVVRKVIKLVGRASIIIFILALTIFISAISLGGVGIMTMVEKLANN 469

Query: 1361 EHIGFESMC 1387
            E++GF+ +C
Sbjct: 470  EYMGFDDLC 478


>ref|XP_002310222.1| predicted protein [Populus trichocarpa] gi|222853125|gb|EEE90672.1|
            predicted protein [Populus trichocarpa]
          Length = 454

 Score =  515 bits (1327), Expect = e-143
 Identities = 255/398 (64%), Positives = 302/398 (75%)
 Frame = +2

Query: 194  ELEFGWKLVVGTTIGFXXXXXXXXXXXXXXXXXXPMLTLIIGFDPKSSTAISKCMIMGAA 373
            +++F W++VVGT +GF                  PMLTLIIGFDPKSSTAISKCMIMGAA
Sbjct: 57   DMKFDWRVVVGTIVGFFGAALGSVGGVGGGGIFVPMLTLIIGFDPKSSTAISKCMIMGAA 116

Query: 374  GSTVYYNLKLRHPTLDLPIIDYDLALLFQPMLMLGISIGVVFNIIFADWMVTILLIILFV 553
            G+TVYYNL+LRHPTLD+PIIDYDLALLFQPMLMLGISIGV FN++FADWMVT+LLIILF+
Sbjct: 117  GATVYYNLRLRHPTLDMPIIDYDLALLFQPMLMLGISIGVAFNVMFADWMVTVLLIILFI 176

Query: 554  GTSTKALFKGIETWKEETIMKKEAANSLVSESKQNDDSRQDYTPLPSGPAALRSDEVSLM 733
            GTSTKALFKGI+TWK+E++MKKEAA  L SESK  D + ++Y PLPSGP  L  DEV L 
Sbjct: 177  GTSTKALFKGIDTWKKESVMKKEAAKQLESESKPGDGAEEEYQPLPSGPVVLHDDEVPLR 236

Query: 734  DNVYWKDFMLLLFVWVSFLAIQLVKTYAEKCSVEYWILISLQVPIAVSVSLYEAICLYKG 913
            +N+ WK+  LL++VWV+FL +Q+V+T    CSV YWIL SLQVPIA SV+L+EAICL KG
Sbjct: 237  ENIRWKELALLVYVWVAFLVVQIVQTNVPTCSVMYWILNSLQVPIAASVTLFEAICLCKG 296

Query: 914  NRVIASIGKETTNWKVHQLLLYCFCGITAXXXXXXXXXXXXXXXXXXXXXXXVPPQVXXX 1093
             RVIAS GKE TNWK+HQ+LLYC CGI A                       +PPQV   
Sbjct: 297  TRVIASKGKEITNWKLHQVLLYCSCGIIAGIVGGLLGLGGGFILGPLFLELGIPPQVASA 356

Query: 1094 XXXXXXXXXXXXXVIQYYLLKRFPVPYAAYFVLVATIAAFTGQHIVRKLIMLLGRASLII 1273
                         V++YYLL RFPVPYAAYFVLVATIAAF GQH++R++I +LGRAS+II
Sbjct: 357  TSTFAMAFSSSMSVVEYYLLNRFPVPYAAYFVLVATIAAFAGQHVIRRIIAILGRASIII 416

Query: 1274 FILALTIFVSAISLGGVGIANIVEKLVNHEHIGFESMC 1387
            FILALTIFVSAISLGGVGIAN+VEKL N E++GFE++C
Sbjct: 417  FILALTIFVSAISLGGVGIANMVEKLENDEYMGFENLC 454


>ref|XP_002327812.1| predicted protein [Populus trichocarpa] gi|222836897|gb|EEE75290.1|
            predicted protein [Populus trichocarpa]
          Length = 477

 Score =  515 bits (1326), Expect = e-143
 Identities = 254/399 (63%), Positives = 299/399 (74%)
 Frame = +2

Query: 194  ELEFGWKLVVGTTIGFXXXXXXXXXXXXXXXXXXPMLTLIIGFDPKSSTAISKCMIMGAA 373
            +++F W++VVGT +GF                  PMLTLIIGFDPKSSTAISKCMIMGAA
Sbjct: 77   DMKFDWRIVVGTIVGFLGAALGSVGGVGGGGIFVPMLTLIIGFDPKSSTAISKCMIMGAA 136

Query: 374  GSTVYYNLKLRHPTLDLPIIDYDLALLFQPMLMLGISIGVVFNIIFADWMVTILLIILFV 553
            G+TVYYNL+LRHPTLD+P+IDYDL LLFQPMLMLGISIGV F+++FADWMVT+LLIILF+
Sbjct: 137  GATVYYNLRLRHPTLDMPLIDYDLTLLFQPMLMLGISIGVSFSVMFADWMVTVLLIILFI 196

Query: 554  GTSTKALFKGIETWKEETIMKKEAANSLVSESKQNDDSRQDYTPLPSGPAALRSDEVSLM 733
            GTSTKALFKGI+TWK+ET+M+K+AA  L SESK  D + +DY PLPSGP  L  DEV L 
Sbjct: 197  GTSTKALFKGIDTWKKETMMRKDAAKQLESESKPEDGAEEDYKPLPSGPVVLPDDEVPLR 256

Query: 734  DNVYWKDFMLLLFVWVSFLAIQLVKTYAEKCSVEYWILISLQVPIAVSVSLYEAICLYKG 913
            +N+YWK+  LL +VW  FL +Q+V+TY   CSV YWIL SLQVPIA SV+L+EAICL KG
Sbjct: 257  ENIYWKEVALLFYVWAGFLVVQIVQTYFPTCSVTYWILNSLQVPIAASVTLFEAICLCKG 316

Query: 914  NRVIASIGKETTNWKVHQLLLYCFCGITAXXXXXXXXXXXXXXXXXXXXXXXVPPQVXXX 1093
             RVIAS GKE TNWK+HQ+LLYC CGI A                       +PPQV   
Sbjct: 317  TRVIASKGKEITNWKLHQILLYCSCGIIAGMVGGLLGLGGGFILGPLFLELGIPPQVASA 376

Query: 1094 XXXXXXXXXXXXXVIQYYLLKRFPVPYAAYFVLVATIAAFTGQHIVRKLIMLLGRASLII 1273
                         V++YYLL RFPVPYAAYF LVATI+AF GQH+VRK+I  LGRASLII
Sbjct: 377  TSTFAMAFSSSMSVVEYYLLNRFPVPYAAYFALVATISAFVGQHVVRKIIAFLGRASLII 436

Query: 1274 FILALTIFVSAISLGGVGIANIVEKLVNHEHIGFESMCQ 1390
            FILALTIFVSA+SLGGVGIAN+VEKL N E++GFE++CQ
Sbjct: 437  FILALTIFVSAVSLGGVGIANMVEKLENEEYMGFENLCQ 475


>ref|XP_002267318.1| PREDICTED: uncharacterized protein LOC100253061 [Vitis vinifera]
          Length = 476

 Score =  513 bits (1321), Expect = e-143
 Identities = 261/428 (60%), Positives = 311/428 (72%), Gaps = 6/428 (1%)
 Frame = +2

Query: 122  KNTEPRSISEA------SRLRIHGLIWIIQELEFGWKLVVGTTIGFXXXXXXXXXXXXXX 283
            KN EP  +S+       S    +  +W   +++FGWKLVV + IGF              
Sbjct: 52   KNKEPGFLSKVVHFLWQSGKSSYQHVW--PDMKFGWKLVVASIIGFFGAALGSVGGVGGG 109

Query: 284  XXXXPMLTLIIGFDPKSSTAISKCMIMGAAGSTVYYNLKLRHPTLDLPIIDYDLALLFQP 463
                PMLTLI+GFDPKSSTAISKCMIMGAAGSTVYYN++LRHPTLD+PIIDYDLALLFQP
Sbjct: 110  GIFVPMLTLIVGFDPKSSTAISKCMIMGAAGSTVYYNMRLRHPTLDMPIIDYDLALLFQP 169

Query: 464  MLMLGISIGVVFNIIFADWMVTILLIILFVGTSTKALFKGIETWKEETIMKKEAANSLVS 643
            MLMLGISIGV FN+IFADWMVT+LLIILF+GTSTKALFKGIETWK+ETIMKKEAA  L +
Sbjct: 170  MLMLGISIGVAFNVIFADWMVTVLLIILFLGTSTKALFKGIETWKKETIMKKEAARLLEA 229

Query: 644  ESKQNDDSRQDYTPLPSGPAALRSDEVSLMDNVYWKDFMLLLFVWVSFLAIQLVKTYAEK 823
            E+K       DY PLPSGPA +R D V ++ N+ WK+  LL++VWV+FLA+Q+VKTY   
Sbjct: 230  ETKPTG----DYRPLPSGPATIRDDHVPVIYNICWKELALLVYVWVAFLAVQIVKTYTVT 285

Query: 824  CSVEYWILISLQVPIAVSVSLYEAICLYKGNRVIASIGKETTNWKVHQLLLYCFCGITAX 1003
            CS+EYW+L  LQVPIA SVS+YEA+CLYKG RVIAS GKE TNWK+HQ+ LYC CGI A 
Sbjct: 286  CSIEYWVLNCLQVPIAASVSIYEAVCLYKGTRVIASKGKEVTNWKIHQIFLYCSCGIVAG 345

Query: 1004 XXXXXXXXXXXXXXXXXXXXXXVPPQVXXXXXXXXXXXXXXXXVIQYYLLKRFPVPYAAY 1183
                                  +PPQV                V+QY+LL+RFPVPYA+Y
Sbjct: 346  LVGGLLGLGGGFILGPLFLELGIPPQVASATSTFSMAFSSSMSVVQYHLLRRFPVPYASY 405

Query: 1184 FVLVATIAAFTGQHIVRKLIMLLGRASLIIFILALTIFVSAISLGGVGIANIVEKLVNHE 1363
            FVLVATIAA  GQH+VRK+I L+GRAS+IIFILALTIF+SAISLGGVGI  +VEKL N+E
Sbjct: 406  FVLVATIAALVGQHVVRKVIKLVGRASIIIFILALTIFISAISLGGVGIMTMVEKLANNE 465

Query: 1364 HIGFESMC 1387
            ++GF+ +C
Sbjct: 466  YMGFDDLC 473


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