BLASTX nr result

ID: Coptis25_contig00005008 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00005008
         (3607 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002510732.1| hmg-CoA reductase, putative [Ricinus communi...   549   e-153
gb|ACV65036.1| 3-hydroxy-3-methylglutaryl coenzyme A reductase [...   546   e-152
gb|AEL30660.1| 3-hydroxy-3-methylglutaryl-CoA reductase [Paris f...   546   e-152
emb|CBI40773.3| unnamed protein product [Vitis vinifera]              546   e-152
ref|XP_002275827.1| PREDICTED: 3-hydroxy-3-methylglutaryl-coenzy...   546   e-152

>ref|XP_002510732.1| hmg-CoA reductase, putative [Ricinus communis]
            gi|223551433|gb|EEF52919.1| hmg-CoA reductase, putative
            [Ricinus communis]
          Length = 576

 Score =  549 bits (1414), Expect = e-153
 Identities = 272/308 (88%), Positives = 300/308 (97%)
 Frame = -2

Query: 1434 VYASGGASSVLLKDGMTRAPIVRFGTAKRAAELKFFVENPANFDTLSVIFNRSSRFARLQ 1255
            ++ SGGA+SVLLKDGMTRAP+VRFG+A RAAELKFF+ENP NFDTLSV+FNRSSRFA+LQ
Sbjct: 269  IHLSGGANSVLLKDGMTRAPVVRFGSAARAAELKFFLENPENFDTLSVVFNRSSRFAKLQ 328

Query: 1254 SIQCAMAGKNLYMRFTCSTGDAMGMNMVSKGVQNVLDFLQNDFPDMDVISISGNFCSDKK 1075
            +IQCA+AGKNLYMRF+CSTGDAMGMNMVSKGVQNVLDFLQNDFPDMDVI ISGNFCSDKK
Sbjct: 329  AIQCAIAGKNLYMRFSCSTGDAMGMNMVSKGVQNVLDFLQNDFPDMDVIGISGNFCSDKK 388

Query: 1074 PSAVNWIEGRGKSVVCEAIIKEEVVRKVLKTTVPALVELNMLKNLTGSAVAGALGGFNAH 895
            P+AVNWIEGRGKSVVCEAIIKEEVV+KVLKT V +LVELN+LKNLTGSAVAGALGGFNAH
Sbjct: 389  PAAVNWIEGRGKSVVCEAIIKEEVVKKVLKTNVASLVELNVLKNLTGSAVAGALGGFNAH 448

Query: 894  ASNIVSAVFIATGQDPAQNIESSHCITMMEAVNEGKDLHISVTMPSIEVGTVGGGTQLAS 715
            A+NIVSA+FIATGQDPAQN+ESSHCITMMEAVN+GKDLH+SVTMPSIEVGTVGGGTQLAS
Sbjct: 449  AANIVSAIFIATGQDPAQNVESSHCITMMEAVNDGKDLHVSVTMPSIEVGTVGGGTQLAS 508

Query: 714  QSACLNLLGVKGANKEAPGSNARLLASIVAGSALAGELSLMSALAAGQLVKSHMKYNRSS 535
            QSACLNLLGVKGA+KE+PGSN+RLLA+IVAGS LAGELSLMSA+AAGQLVKSHMKYNRSS
Sbjct: 509  QSACLNLLGVKGASKESPGSNSRLLATIVAGSVLAGELSLMSAIAAGQLVKSHMKYNRSS 568

Query: 534  KDVTKTAA 511
            +DV+K A+
Sbjct: 569  RDVSKAAS 576


>gb|ACV65036.1| 3-hydroxy-3-methylglutaryl coenzyme A reductase [Panax quinquefolius]
          Length = 589

 Score =  546 bits (1408), Expect = e-152
 Identities = 277/339 (81%), Positives = 314/339 (92%), Gaps = 2/339 (0%)
 Frame = -2

Query: 1521 GSVLLSFTDCRLLLSSS--AFLAGVSCTFYKVYASGGASSVLLKDGMTRAPIVRFGTAKR 1348
            G +LL+ T+  + ++++    +A  +     +YASGGA+SVLL+DGMTRAP+VRFG+AKR
Sbjct: 251  GPLLLNETEYSVPMATTEGCLVASTNRGCKAIYASGGATSVLLRDGMTRAPVVRFGSAKR 310

Query: 1347 AAELKFFVENPANFDTLSVIFNRSSRFARLQSIQCAMAGKNLYMRFTCSTGDAMGMNMVS 1168
            AAELKFF+E+P NF+TL+++FN+SSRF RLQ I+CA+AGKNLYMRFTCSTGDAMGMNMVS
Sbjct: 311  AAELKFFLEDPMNFETLALVFNKSSRFGRLQGIKCAIAGKNLYMRFTCSTGDAMGMNMVS 370

Query: 1167 KGVQNVLDFLQNDFPDMDVISISGNFCSDKKPSAVNWIEGRGKSVVCEAIIKEEVVRKVL 988
            KGVQNVLDFLQNDFPDMDV+ ISGN+CSDKKP+AVNWIEGRGKSVVCEAIIKEEVV+KVL
Sbjct: 371  KGVQNVLDFLQNDFPDMDVMGISGNYCSDKKPAAVNWIEGRGKSVVCEAIIKEEVVKKVL 430

Query: 987  KTTVPALVELNMLKNLTGSAVAGALGGFNAHASNIVSAVFIATGQDPAQNIESSHCITMM 808
            KT V ALVELNMLKNL GSAVAGALGGFNAHASNIVSAV+IATGQDPAQNIESSHCITMM
Sbjct: 431  KTNVAALVELNMLKNLAGSAVAGALGGFNAHASNIVSAVYIATGQDPAQNIESSHCITMM 490

Query: 807  EAVNEGKDLHISVTMPSIEVGTVGGGTQLASQSACLNLLGVKGANKEAPGSNARLLASIV 628
            EAVN+GKDLHISVTMPSIEVGTVGGGTQLASQSACLNLLGVKGA+KE+PGSN+RLLASIV
Sbjct: 491  EAVNDGKDLHISVTMPSIEVGTVGGGTQLASQSACLNLLGVKGASKESPGSNSRLLASIV 550

Query: 627  AGSALAGELSLMSALAAGQLVKSHMKYNRSSKDVTKTAA 511
            AGS LAGELSLMSALAAGQLVKSHMK+NRSSKDV+K ++
Sbjct: 551  AGSVLAGELSLMSALAAGQLVKSHMKFNRSSKDVSKLSS 589


>gb|AEL30660.1| 3-hydroxy-3-methylglutaryl-CoA reductase [Paris fargesii]
            gi|440573230|gb|AGC13078.1|
            3-hydroxy-3-methylglutaryl-CoA reductase [Paris fargesii]
          Length = 575

 Score =  546 bits (1407), Expect = e-152
 Identities = 268/307 (87%), Positives = 300/307 (97%)
 Frame = -2

Query: 1434 VYASGGASSVLLKDGMTRAPIVRFGTAKRAAELKFFVENPANFDTLSVIFNRSSRFARLQ 1255
            ++ SGGA++VLLKDGMTRAP+VRFG+AKRAAELKFF+E+P NFDTL+V+FNRSSRFA+LQ
Sbjct: 264  IHVSGGATTVLLKDGMTRAPVVRFGSAKRAAELKFFLEDPLNFDTLAVVFNRSSRFAKLQ 323

Query: 1254 SIQCAMAGKNLYMRFTCSTGDAMGMNMVSKGVQNVLDFLQNDFPDMDVISISGNFCSDKK 1075
             IQC+MAGKNLYMRFTCSTGDAMGMNMVSKGVQNVLD+LQNDFPDMDVISISGN+CSDKK
Sbjct: 324  GIQCSMAGKNLYMRFTCSTGDAMGMNMVSKGVQNVLDYLQNDFPDMDVISISGNYCSDKK 383

Query: 1074 PSAVNWIEGRGKSVVCEAIIKEEVVRKVLKTTVPALVELNMLKNLTGSAVAGALGGFNAH 895
            P+AVNWIEGRGKSVVCEAIIK++VV+KVLKTTVPALVELNM+KNL GSAVAG+LGGFNAH
Sbjct: 384  PAAVNWIEGRGKSVVCEAIIKDQVVKKVLKTTVPALVELNMIKNLAGSAVAGSLGGFNAH 443

Query: 894  ASNIVSAVFIATGQDPAQNIESSHCITMMEAVNEGKDLHISVTMPSIEVGTVGGGTQLAS 715
            ASNIVSAVFIATGQDPAQN+ESSHCITMMEAVN+GKDLH+SVTMPSIEVGTVGGGTQLAS
Sbjct: 444  ASNIVSAVFIATGQDPAQNVESSHCITMMEAVNDGKDLHVSVTMPSIEVGTVGGGTQLAS 503

Query: 714  QSACLNLLGVKGANKEAPGSNARLLASIVAGSALAGELSLMSALAAGQLVKSHMKYNRSS 535
            QSACL LLGVKGAN E+PG+N+RLLA++VAG+ LAGELSLMSALAAGQLVKSHMKYNRSS
Sbjct: 504  QSACLELLGVKGANLESPGANSRLLATVVAGAVLAGELSLMSALAAGQLVKSHMKYNRSS 563

Query: 534  KDVTKTA 514
            KD++K+A
Sbjct: 564  KDMSKSA 570


>emb|CBI40773.3| unnamed protein product [Vitis vinifera]
          Length = 541

 Score =  546 bits (1406), Expect = e-152
 Identities = 269/308 (87%), Positives = 296/308 (96%)
 Frame = -2

Query: 1434 VYASGGASSVLLKDGMTRAPIVRFGTAKRAAELKFFVENPANFDTLSVIFNRSSRFARLQ 1255
            +Y SGGA+S++L+DGMTRAP+VRF TAKRAAELKFF+ENP NF+TLSVIFNRSSRFARLQ
Sbjct: 234  IYVSGGATSMVLRDGMTRAPVVRFATAKRAAELKFFLENPENFETLSVIFNRSSRFARLQ 293

Query: 1254 SIQCAMAGKNLYMRFTCSTGDAMGMNMVSKGVQNVLDFLQNDFPDMDVISISGNFCSDKK 1075
            SIQCAMAGKNLY+RF+CSTGDAMGMNMVSKGVQNVLDFLQNDFPDMDVI ISGNFCSDKK
Sbjct: 294  SIQCAMAGKNLYIRFSCSTGDAMGMNMVSKGVQNVLDFLQNDFPDMDVIGISGNFCSDKK 353

Query: 1074 PSAVNWIEGRGKSVVCEAIIKEEVVRKVLKTTVPALVELNMLKNLTGSAVAGALGGFNAH 895
            P+AVNWIEGRGKSVVCEA+IKE+VVRKVLKT + ALVELNMLKNL GSAVAGALGGFNAH
Sbjct: 354  PAAVNWIEGRGKSVVCEAVIKEDVVRKVLKTNIAALVELNMLKNLAGSAVAGALGGFNAH 413

Query: 894  ASNIVSAVFIATGQDPAQNIESSHCITMMEAVNEGKDLHISVTMPSIEVGTVGGGTQLAS 715
            A NIVSA+FIATGQDPAQN+ES HCITMMEAVN+GKDLHISVTMPS+EVGTVGGGTQL S
Sbjct: 414  AGNIVSAIFIATGQDPAQNVESCHCITMMEAVNDGKDLHISVTMPSVEVGTVGGGTQLPS 473

Query: 714  QSACLNLLGVKGANKEAPGSNARLLASIVAGSALAGELSLMSALAAGQLVKSHMKYNRSS 535
            QSACLNLLGVKGA+KE+PGSN++LLA+I+AGS LAGELSLMSA+AAGQLVKSHMKYNRSS
Sbjct: 474  QSACLNLLGVKGASKESPGSNSKLLATIIAGSVLAGELSLMSAIAAGQLVKSHMKYNRSS 533

Query: 534  KDVTKTAA 511
            KDV+K A+
Sbjct: 534  KDVSKVAS 541


>ref|XP_002275827.1| PREDICTED: 3-hydroxy-3-methylglutaryl-coenzyme A reductase 1-like
            [Vitis vinifera]
          Length = 593

 Score =  546 bits (1406), Expect = e-152
 Identities = 269/308 (87%), Positives = 296/308 (96%)
 Frame = -2

Query: 1434 VYASGGASSVLLKDGMTRAPIVRFGTAKRAAELKFFVENPANFDTLSVIFNRSSRFARLQ 1255
            +Y SGGA+S++L+DGMTRAP+VRF TAKRAAELKFF+ENP NF+TLSVIFNRSSRFARLQ
Sbjct: 286  IYVSGGATSMVLRDGMTRAPVVRFATAKRAAELKFFLENPENFETLSVIFNRSSRFARLQ 345

Query: 1254 SIQCAMAGKNLYMRFTCSTGDAMGMNMVSKGVQNVLDFLQNDFPDMDVISISGNFCSDKK 1075
            SIQCAMAGKNLY+RF+CSTGDAMGMNMVSKGVQNVLDFLQNDFPDMDVI ISGNFCSDKK
Sbjct: 346  SIQCAMAGKNLYIRFSCSTGDAMGMNMVSKGVQNVLDFLQNDFPDMDVIGISGNFCSDKK 405

Query: 1074 PSAVNWIEGRGKSVVCEAIIKEEVVRKVLKTTVPALVELNMLKNLTGSAVAGALGGFNAH 895
            P+AVNWIEGRGKSVVCEA+IKE+VVRKVLKT + ALVELNMLKNL GSAVAGALGGFNAH
Sbjct: 406  PAAVNWIEGRGKSVVCEAVIKEDVVRKVLKTNIAALVELNMLKNLAGSAVAGALGGFNAH 465

Query: 894  ASNIVSAVFIATGQDPAQNIESSHCITMMEAVNEGKDLHISVTMPSIEVGTVGGGTQLAS 715
            A NIVSA+FIATGQDPAQN+ES HCITMMEAVN+GKDLHISVTMPS+EVGTVGGGTQL S
Sbjct: 466  AGNIVSAIFIATGQDPAQNVESCHCITMMEAVNDGKDLHISVTMPSVEVGTVGGGTQLPS 525

Query: 714  QSACLNLLGVKGANKEAPGSNARLLASIVAGSALAGELSLMSALAAGQLVKSHMKYNRSS 535
            QSACLNLLGVKGA+KE+PGSN++LLA+I+AGS LAGELSLMSA+AAGQLVKSHMKYNRSS
Sbjct: 526  QSACLNLLGVKGASKESPGSNSKLLATIIAGSVLAGELSLMSAIAAGQLVKSHMKYNRSS 585

Query: 534  KDVTKTAA 511
            KDV+K A+
Sbjct: 586  KDVSKVAS 593


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