BLASTX nr result

ID: Coptis25_contig00005001 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00005001
         (1277 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002298835.1| predicted protein [Populus trichocarpa] gi|2...    67   1e-08
ref|XP_002274947.2| PREDICTED: uncharacterized protein LOC100253...    67   1e-08
ref|XP_002523203.1| protein phosphatases pp1 regulatory subunit,...    66   2e-08
ref|XP_004158689.1| PREDICTED: uncharacterized LOC101209660 [Cuc...    65   4e-08
ref|XP_004134555.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...    65   4e-08

>ref|XP_002298835.1| predicted protein [Populus trichocarpa] gi|222846093|gb|EEE83640.1|
            predicted protein [Populus trichocarpa]
          Length = 139

 Score = 66.6 bits (161), Expect = 1e-08
 Identities = 27/37 (72%), Positives = 31/37 (83%)
 Frame = -1

Query: 1277 NFLSVSGDYIEGEKLTAPYGYIGGHEGNCLYNWYIHK 1167
            NFLS+SGDYIEG  LTA YGY+GGHEG   YNWY+H+
Sbjct: 103  NFLSISGDYIEGGLLTASYGYVGGHEGKSEYNWYLHE 139


>ref|XP_002274947.2| PREDICTED: uncharacterized protein LOC100253161 [Vitis vinifera]
            gi|297740810|emb|CBI30992.3| unnamed protein product
            [Vitis vinifera]
          Length = 1717

 Score = 66.6 bits (161), Expect = 1e-08
 Identities = 26/39 (66%), Positives = 33/39 (84%)
 Frame = -1

Query: 1277 NFLSVSGDYIEGEKLTAPYGYIGGHEGNCLYNWYIHKID 1161
            NFLS++GDYIE   LTA YGYIGGHEG  +YNWY+H+++
Sbjct: 900  NFLSITGDYIEDGILTASYGYIGGHEGKSIYNWYLHEVE 938


>ref|XP_002523203.1| protein phosphatases pp1 regulatory subunit, putative [Ricinus
            communis] gi|223537610|gb|EEF39234.1| protein
            phosphatases pp1 regulatory subunit, putative [Ricinus
            communis]
          Length = 1582

 Score = 66.2 bits (160), Expect = 2e-08
 Identities = 26/39 (66%), Positives = 32/39 (82%)
 Frame = -1

Query: 1277 NFLSVSGDYIEGEKLTAPYGYIGGHEGNCLYNWYIHKID 1161
            NFLS++GDY EG  LTA YGYIGGHEG  +YNWY+H+ +
Sbjct: 765  NFLSITGDYTEGGMLTASYGYIGGHEGKSVYNWYLHEAE 803


>ref|XP_004158689.1| PREDICTED: uncharacterized LOC101209660 [Cucumis sativus]
          Length = 1209

 Score = 65.1 bits (157), Expect = 4e-08
 Identities = 25/39 (64%), Positives = 32/39 (82%)
 Frame = -1

Query: 1277 NFLSVSGDYIEGEKLTAPYGYIGGHEGNCLYNWYIHKID 1161
            NFLS++GDY EG  LTA YGY+GGHEG  +Y WY+H+I+
Sbjct: 922  NFLSITGDYTEGGILTASYGYVGGHEGKSIYRWYLHEIE 960


>ref|XP_004134555.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC101209660
            [Cucumis sativus]
          Length = 1739

 Score = 65.1 bits (157), Expect = 4e-08
 Identities = 25/39 (64%), Positives = 32/39 (82%)
 Frame = -1

Query: 1277 NFLSVSGDYIEGEKLTAPYGYIGGHEGNCLYNWYIHKID 1161
            NFLS++GDY EG  LTA YGY+GGHEG  +Y WY+H+I+
Sbjct: 922  NFLSITGDYTEGGILTASYGYVGGHEGKSIYRWYLHEIE 960


Top