BLASTX nr result

ID: Coptis25_contig00004969 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00004969
         (990 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002321073.1| predicted protein [Populus trichocarpa] gi|2...   177   2e-57
ref|XP_004147278.1| PREDICTED: aspartate aminotransferase, mitoc...   177   8e-57
ref|NP_180654.1| aspartate aminotransferase [Arabidopsis thalian...   180   2e-56
ref|XP_002879295.1| hypothetical protein ARALYDRAFT_482020 [Arab...   180   2e-56
dbj|BAD93907.1| aspartate aminotransferase [Arabidopsis thaliana]     180   2e-56

>ref|XP_002321073.1| predicted protein [Populus trichocarpa] gi|222861846|gb|EEE99388.1|
           predicted protein [Populus trichocarpa]
          Length = 406

 Score =  177 bits (450), Expect(2) = 2e-57
 Identities = 83/93 (89%), Positives = 91/93 (97%)
 Frame = +2

Query: 377 WLKEVKVMADRIIGMRTSLKENLEKLGSPLSWEHVTNQIGMFCYSGMTPEQVDRLTSEYH 556
           WLKEVKVMADRIIGMR++L+ENLEKLGSPLSW+H+T+QIGMFCYSGMTPEQVDRLT E+H
Sbjct: 314 WLKEVKVMADRIIGMRSALRENLEKLGSPLSWKHITDQIGMFCYSGMTPEQVDRLTKEFH 373

Query: 557 IYMTRNGRISMAGVTTGNVGYLANAINEVTKSA 655
           IYMTRNGRISMAG+TTGNVGYLANAINEVT SA
Sbjct: 374 IYMTRNGRISMAGITTGNVGYLANAINEVTSSA 406



 Score = 72.4 bits (176), Expect(2) = 2e-57
 Identities = 34/35 (97%), Positives = 35/35 (100%)
 Frame = +1

Query: 205 SVLCEDEKQAVAVKSQLQQLARPMYSNPPVHGALI 309
           SVLCEDEKQAVAVKSQLQQLARPMYSNPPVHGAL+
Sbjct: 266 SVLCEDEKQAVAVKSQLQQLARPMYSNPPVHGALV 300


>ref|XP_004147278.1| PREDICTED: aspartate aminotransferase, mitochondrial-like [Cucumis
           sativus]
          Length = 428

 Score =  177 bits (448), Expect(2) = 8e-57
 Identities = 84/92 (91%), Positives = 90/92 (97%)
 Frame = +2

Query: 377 WLKEVKVMADRIIGMRTSLKENLEKLGSPLSWEHVTNQIGMFCYSGMTPEQVDRLTSEYH 556
           WLKEVKVMADRIIGMRT+L+ENLEKLGSPLSWEH+T QIGMFCYSG+TPEQVDRLT+EYH
Sbjct: 336 WLKEVKVMADRIIGMRTALRENLEKLGSPLSWEHITKQIGMFCYSGLTPEQVDRLTNEYH 395

Query: 557 IYMTRNGRISMAGVTTGNVGYLANAINEVTKS 652
           IYMTRNGRISMAGVTTGNV YLANAI+EVTKS
Sbjct: 396 IYMTRNGRISMAGVTTGNVPYLANAIHEVTKS 427



 Score = 70.9 bits (172), Expect(2) = 8e-57
 Identities = 32/35 (91%), Positives = 35/35 (100%)
 Frame = +1

Query: 205 SVLCEDEKQAVAVKSQLQQLARPMYSNPPVHGALI 309
           SV+CEDEKQAVAVKSQLQQLARPMYSNPP+HGAL+
Sbjct: 288 SVVCEDEKQAVAVKSQLQQLARPMYSNPPIHGALV 322


>ref|NP_180654.1| aspartate aminotransferase [Arabidopsis thaliana]
           gi|186504418|ref|NP_001118421.1| aspartate
           aminotransferase [Arabidopsis thaliana]
           gi|1168256|sp|P46643.1|AAT1_ARATH RecName:
           Full=Aspartate aminotransferase, mitochondrial; AltName:
           Full=Transaminase A; Flags: Precursor
           gi|693688|gb|AAA79369.1| aspartate aminotransferase
           [Arabidopsis thaliana] gi|3201622|gb|AAC20731.1|
           aspartate aminotransferase (AAT1) [Arabidopsis thaliana]
           gi|16649085|gb|AAL24394.1| aspartate aminotransferase
           (AAT1) [Arabidopsis thaliana] gi|22136256|gb|AAM91206.1|
           aspartate aminotransferase AAT1 [Arabidopsis thaliana]
           gi|330253374|gb|AEC08468.1| aspartate aminotransferase
           [Arabidopsis thaliana] gi|330253375|gb|AEC08469.1|
           aspartate aminotransferase [Arabidopsis thaliana]
          Length = 430

 Score =  180 bits (456), Expect(2) = 2e-56
 Identities = 86/93 (92%), Positives = 92/93 (98%)
 Frame = +2

Query: 377 WLKEVKVMADRIIGMRTSLKENLEKLGSPLSWEHVTNQIGMFCYSGMTPEQVDRLTSEYH 556
           WLKEVKVMADRIIGMRT+L+E+LEKLGSPLSWEHVT QIGMFCYSG+TPEQVDRLTSEYH
Sbjct: 338 WLKEVKVMADRIIGMRTTLRESLEKLGSPLSWEHVTKQIGMFCYSGLTPEQVDRLTSEYH 397

Query: 557 IYMTRNGRISMAGVTTGNVGYLANAINEVTKSA 655
           IYMTRNGRISMAGVTTGNVGYLANAI+EVTKS+
Sbjct: 398 IYMTRNGRISMAGVTTGNVGYLANAIHEVTKSS 430



 Score = 66.2 bits (160), Expect(2) = 2e-56
 Identities = 31/33 (93%), Positives = 32/33 (96%)
 Frame = +1

Query: 205 SVLCEDEKQAVAVKSQLQQLARPMYSNPPVHGA 303
           SVLCED KQAVAVKSQLQQLARPMYSNPP+HGA
Sbjct: 290 SVLCEDPKQAVAVKSQLQQLARPMYSNPPLHGA 322


>ref|XP_002879295.1| hypothetical protein ARALYDRAFT_482020 [Arabidopsis lyrata subsp.
           lyrata] gi|297325134|gb|EFH55554.1| hypothetical protein
           ARALYDRAFT_482020 [Arabidopsis lyrata subsp. lyrata]
          Length = 430

 Score =  180 bits (456), Expect(2) = 2e-56
 Identities = 86/93 (92%), Positives = 92/93 (98%)
 Frame = +2

Query: 377 WLKEVKVMADRIIGMRTSLKENLEKLGSPLSWEHVTNQIGMFCYSGMTPEQVDRLTSEYH 556
           WLKEVKVMADRIIGMRT+L+E+LEKLGSPLSWEHVT QIGMFCYSG+TPEQVDRLTSEYH
Sbjct: 338 WLKEVKVMADRIIGMRTTLRESLEKLGSPLSWEHVTKQIGMFCYSGLTPEQVDRLTSEYH 397

Query: 557 IYMTRNGRISMAGVTTGNVGYLANAINEVTKSA 655
           IYMTRNGRISMAGVTTGNVGYLANAI+EVTKS+
Sbjct: 398 IYMTRNGRISMAGVTTGNVGYLANAIHEVTKSS 430



 Score = 66.2 bits (160), Expect(2) = 2e-56
 Identities = 31/33 (93%), Positives = 32/33 (96%)
 Frame = +1

Query: 205 SVLCEDEKQAVAVKSQLQQLARPMYSNPPVHGA 303
           SVLCED KQAVAVKSQLQQLARPMYSNPP+HGA
Sbjct: 290 SVLCEDAKQAVAVKSQLQQLARPMYSNPPLHGA 322


>dbj|BAD93907.1| aspartate aminotransferase [Arabidopsis thaliana]
          Length = 189

 Score =  180 bits (456), Expect(2) = 2e-56
 Identities = 86/93 (92%), Positives = 92/93 (98%)
 Frame = +2

Query: 377 WLKEVKVMADRIIGMRTSLKENLEKLGSPLSWEHVTNQIGMFCYSGMTPEQVDRLTSEYH 556
           WLKEVKVMADRIIGMRT+L+E+LEKLGSPLSWEHVT QIGMFCYSG+TPEQVDRLTSEYH
Sbjct: 97  WLKEVKVMADRIIGMRTTLRESLEKLGSPLSWEHVTKQIGMFCYSGLTPEQVDRLTSEYH 156

Query: 557 IYMTRNGRISMAGVTTGNVGYLANAINEVTKSA 655
           IYMTRNGRISMAGVTTGNVGYLANAI+EVTKS+
Sbjct: 157 IYMTRNGRISMAGVTTGNVGYLANAIHEVTKSS 189



 Score = 66.2 bits (160), Expect(2) = 2e-56
 Identities = 31/33 (93%), Positives = 32/33 (96%)
 Frame = +1

Query: 205 SVLCEDEKQAVAVKSQLQQLARPMYSNPPVHGA 303
           SVLCED KQAVAVKSQLQQLARPMYSNPP+HGA
Sbjct: 49  SVLCEDPKQAVAVKSQLQQLARPMYSNPPLHGA 81


Top