BLASTX nr result

ID: Coptis25_contig00004953 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00004953
         (1149 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002515199.1| hypothetical protein RCOM_1343910 [Ricinus c...   234   2e-59
ref|XP_002512575.1| nucleic acid binding protein, putative [Rici...   234   3e-59
ref|XP_003535312.1| PREDICTED: uncharacterized protein LOC100794...   230   4e-58
ref|XP_003626148.1| Limkain-b1 [Medicago truncatula] gi|35550116...   229   1e-57
ref|XP_004149497.1| PREDICTED: uncharacterized protein LOC101219...   228   2e-57

>ref|XP_002515199.1| hypothetical protein RCOM_1343910 [Ricinus communis]
           gi|223545679|gb|EEF47183.1| hypothetical protein
           RCOM_1343910 [Ricinus communis]
          Length = 627

 Score =  234 bits (598), Expect = 2e-59
 Identities = 127/202 (62%), Positives = 137/202 (67%)
 Frame = -1

Query: 948 AERQYVKAKISVWWDIENCQVRKGCDLHAIAQNIRSSLDKMNYCGEISAISAYGDINGIN 769
           AE QYV AK SVWWDIENCQV KGCD HAIAQNI S+L K+NYCG +S ISAYGD N I 
Sbjct: 19  AEAQYVSAKTSVWWDIENCQVPKGCDPHAIAQNISSALVKLNYCGAVS-ISAYGDTNRIP 77

Query: 768 TQVQHALNSTGVTLNHVPAGAKDASDKKILVDMLLWAVDNPAPANYLLISGDRDFSNALH 589
             VQHAL+STG+ LNHVPAG KDASDKKILVDML WAVDNPAPANYLLISGDRDFSN LH
Sbjct: 78  QSVQHALSSTGIALNHVPAGVKDASDKKILVDMLFWAVDNPAPANYLLISGDRDFSNCLH 137

Query: 588 QLRMRRYNILLAQPPXXXXXXXXXXXXVWLWTXXXXXXXXXXXXXXXXXXXXXXXXXPPL 409
           QLRMRRYNILLAQP             VWLWT                          PL
Sbjct: 138 QLRMRRYNILLAQPQKASAPLIAAAKTVWLWT-------------------SLSAGGAPL 178

Query: 408 TKGEVTQFSSNNNISATDNRVS 343
           + GE TQ +   N+S+T N V+
Sbjct: 179 SNGESTQLA---NVSSTFNAVT 197


>ref|XP_002512575.1| nucleic acid binding protein, putative [Ricinus communis]
           gi|223548536|gb|EEF50027.1| nucleic acid binding
           protein, putative [Ricinus communis]
          Length = 703

 Score =  234 bits (597), Expect = 3e-59
 Identities = 121/162 (74%), Positives = 127/162 (78%)
 Frame = -1

Query: 978 GGEEESVIGRAERQYVKAKISVWWDIENCQVRKGCDLHAIAQNIRSSLDKMNYCGEISAI 799
           GGE     G AE QYV AKISVWWDIENCQV + CD HAIAQNI S+L KMNYCG +S I
Sbjct: 83  GGE-----GGAEPQYVTAKISVWWDIENCQVPRDCDPHAIAQNISSALVKMNYCGPVS-I 136

Query: 798 SAYGDINGINTQVQHALNSTGVTLNHVPAGAKDASDKKILVDMLLWAVDNPAPANYLLIS 619
           SAYGD N IN+ VQ AL+STG+ LNHVPAG KDASDKKILVDML WAVDNPAPANYLLIS
Sbjct: 137 SAYGDTNRINSAVQQALSSTGIALNHVPAGVKDASDKKILVDMLFWAVDNPAPANYLLIS 196

Query: 618 GDRDFSNALHQLRMRRYNILLAQPPXXXXXXXXXXXXVWLWT 493
           GDRDFSNALHQLRMRRYNILLAQP             VWLWT
Sbjct: 197 GDRDFSNALHQLRMRRYNILLAQPQRASAPLLAAARSVWLWT 238


>ref|XP_003535312.1| PREDICTED: uncharacterized protein LOC100794384 [Glycine max]
          Length = 617

 Score =  230 bits (587), Expect = 4e-58
 Identities = 123/208 (59%), Positives = 136/208 (65%)
 Frame = -1

Query: 978 GGEEESVIGRAERQYVKAKISVWWDIENCQVRKGCDLHAIAQNIRSSLDKMNYCGEISAI 799
           GG   +   +AE QY  AK SVWWDIENC V KGCD HAIAQNI S+L + NYCG +S I
Sbjct: 2   GGGGGAATAQAEAQYSTAKTSVWWDIENCHVPKGCDPHAIAQNISSALVRTNYCGPVS-I 60

Query: 798 SAYGDINGINTQVQHALNSTGVTLNHVPAGAKDASDKKILVDMLLWAVDNPAPANYLLIS 619
           SAYGD   I   VQHAL+STG++LNHVPAG KDASDKKILVDML WAVDNPAPANYLLIS
Sbjct: 61  SAYGDTTRITAVVQHALSSTGISLNHVPAGVKDASDKKILVDMLFWAVDNPAPANYLLIS 120

Query: 618 GDRDFSNALHQLRMRRYNILLAQPPXXXXXXXXXXXXVWLWTXXXXXXXXXXXXXXXXXX 439
           GDRDFSNALHQLR+R+YNILLAQP             VWLWT                  
Sbjct: 121 GDRDFSNALHQLRLRKYNILLAQPQKASAPLVAAAKSVWLWT------------------ 162

Query: 438 XXXXXXXPPLTKGEVTQFSSNNNISATD 355
                  PPL  GE  Q  +NN  S++D
Sbjct: 163 -SLLAGGPPLMNGESQQLGNNNIQSSSD 189


>ref|XP_003626148.1| Limkain-b1 [Medicago truncatula] gi|355501163|gb|AES82366.1|
           Limkain-b1 [Medicago truncatula]
          Length = 638

 Score =  229 bits (584), Expect = 1e-57
 Identities = 121/198 (61%), Positives = 135/198 (68%)
 Frame = -1

Query: 948 AERQYVKAKISVWWDIENCQVRKGCDLHAIAQNIRSSLDKMNYCGEISAISAYGDINGIN 769
           AE QY  AKISVWWDIENC V KG D HAIAQNI S+L +MNYCG +S ISAYGD   I 
Sbjct: 10  AEAQYTTAKISVWWDIENCHVPKGSDPHAIAQNISSALVRMNYCGPVS-ISAYGDTTRIP 68

Query: 768 TQVQHALNSTGVTLNHVPAGAKDASDKKILVDMLLWAVDNPAPANYLLISGDRDFSNALH 589
             VQHAL+STG++LNHVPAG KDASDKKILVDML WAVDNPAPANYLLISGDRDFSNALH
Sbjct: 69  ASVQHALSSTGISLNHVPAGVKDASDKKILVDMLFWAVDNPAPANYLLISGDRDFSNALH 128

Query: 588 QLRMRRYNILLAQPPXXXXXXXXXXXXVWLWTXXXXXXXXXXXXXXXXXXXXXXXXXPPL 409
           QLRMRRYNILLAQP             VWLWT                         PPL
Sbjct: 129 QLRMRRYNILLAQPQKASAPLVAAAKSVWLWT-------------------TLLAGGPPL 169

Query: 408 TKGEVTQFSSNNNISATD 355
           T G+  Q S+++ + +++
Sbjct: 170 TSGDTQQLSNSSFLPSSE 187


>ref|XP_004149497.1| PREDICTED: uncharacterized protein LOC101219837 [Cucumis sativus]
           gi|449522226|ref|XP_004168128.1| PREDICTED:
           uncharacterized protein LOC101228378 [Cucumis sativus]
          Length = 665

 Score =  228 bits (581), Expect = 2e-57
 Identities = 113/151 (74%), Positives = 121/151 (80%)
 Frame = -1

Query: 948 AERQYVKAKISVWWDIENCQVRKGCDLHAIAQNIRSSLDKMNYCGEISAISAYGDINGIN 769
           AE QY++AK SVWWDIENCQV KGCD HAIAQNI S+L K+NYCG +S ISAYGD N I 
Sbjct: 15  AEPQYIRAKTSVWWDIENCQVPKGCDPHAIAQNISSALVKINYCGPVS-ISAYGDTNRIP 73

Query: 768 TQVQHALNSTGVTLNHVPAGAKDASDKKILVDMLLWAVDNPAPANYLLISGDRDFSNALH 589
             +Q AL+STG+ LNHVPAG KDASDKKILVDML WAVDNPAPANYLLISGDRDFSNALH
Sbjct: 74  NSIQQALSSTGIALNHVPAGVKDASDKKILVDMLFWAVDNPAPANYLLISGDRDFSNALH 133

Query: 588 QLRMRRYNILLAQPPXXXXXXXXXXXXVWLW 496
           QLRMRRYNILLAQP             VWLW
Sbjct: 134 QLRMRRYNILLAQPQKASAPLVAAAKSVWLW 164


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