BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00004897
         (413 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632761.1| PREDICTED: pre-mRNA-processing-splicing fact...   134   6e-50
ref|XP_003632762.1| PREDICTED: pre-mRNA-processing-splicing fact...   134   6e-50
ref|XP_004158783.1| PREDICTED: LOW QUALITY PROTEIN: pre-mRNA-pro...   134   1e-49
ref|XP_004135844.1| PREDICTED: pre-mRNA-processing-splicing fact...   134   1e-49
ref|XP_002517654.1| Pre-mRNA-processing-splicing factor, putativ...   133   2e-49

>ref|XP_003632761.1| PREDICTED: pre-mRNA-processing-splicing factor 8-like isoform 1
            [Vitis vinifera]
          Length = 2367

 Score =  134 bits (337), Expect(2) = 6e-50
 Identities = 59/62 (95%), Positives = 62/62 (100%)
 Frame = -3

Query: 411  HEFLNDLEPLGWMHTQPNELPQLSPQDLTNHARILENNKQWDGDKCIILTCSFTPGSCSL 232
            H+FLNDLEPLGWMHTQPNELPQLSPQDLT+HARILENNKQWDG+KCIILTCSFTPGSCSL
Sbjct: 2198 HDFLNDLEPLGWMHTQPNELPQLSPQDLTSHARILENNKQWDGEKCIILTCSFTPGSCSL 2257

Query: 231  TA 226
            TA
Sbjct: 2258 TA 2259



 Score = 88.6 bits (218), Expect(2) = 6e-50
 Identities = 38/40 (95%), Positives = 38/40 (95%)
 Frame = -1

Query: 122  GYEWGRANKDTGGNPHGYLPTHYEKVQMLLSDRFLGFYMI 3
            GYEWGR NKDTG NPHGYLPTHYEKVQMLLSDRFLGFYMI
Sbjct: 2266 GYEWGRVNKDTGSNPHGYLPTHYEKVQMLLSDRFLGFYMI 2305


>ref|XP_003632762.1| PREDICTED: pre-mRNA-processing-splicing factor 8-like isoform 2
            [Vitis vinifera] gi|297743472|emb|CBI36339.3| unnamed
            protein product [Vitis vinifera]
          Length = 2347

 Score =  134 bits (337), Expect(2) = 6e-50
 Identities = 59/62 (95%), Positives = 62/62 (100%)
 Frame = -3

Query: 411  HEFLNDLEPLGWMHTQPNELPQLSPQDLTNHARILENNKQWDGDKCIILTCSFTPGSCSL 232
            H+FLNDLEPLGWMHTQPNELPQLSPQDLT+HARILENNKQWDG+KCIILTCSFTPGSCSL
Sbjct: 2178 HDFLNDLEPLGWMHTQPNELPQLSPQDLTSHARILENNKQWDGEKCIILTCSFTPGSCSL 2237

Query: 231  TA 226
            TA
Sbjct: 2238 TA 2239



 Score = 88.6 bits (218), Expect(2) = 6e-50
 Identities = 38/40 (95%), Positives = 38/40 (95%)
 Frame = -1

Query: 122  GYEWGRANKDTGGNPHGYLPTHYEKVQMLLSDRFLGFYMI 3
            GYEWGR NKDTG NPHGYLPTHYEKVQMLLSDRFLGFYMI
Sbjct: 2246 GYEWGRVNKDTGSNPHGYLPTHYEKVQMLLSDRFLGFYMI 2285


>ref|XP_004158783.1| PREDICTED: LOW QUALITY PROTEIN: pre-mRNA-processing-splicing factor
            8-like [Cucumis sativus]
          Length = 2347

 Score =  134 bits (338), Expect(2) = 1e-49
 Identities = 58/62 (93%), Positives = 62/62 (100%)
 Frame = -3

Query: 411  HEFLNDLEPLGWMHTQPNELPQLSPQDLTNHARILENNKQWDGDKCIILTCSFTPGSCSL 232
            H+FLNDLEPLGWMHTQPNELPQLSPQDLTNHA++LENNKQWDG+KCIILTCSFTPGSCSL
Sbjct: 2178 HDFLNDLEPLGWMHTQPNELPQLSPQDLTNHAKVLENNKQWDGEKCIILTCSFTPGSCSL 2237

Query: 231  TA 226
            TA
Sbjct: 2238 TA 2239



 Score = 87.0 bits (214), Expect(2) = 1e-49
 Identities = 37/40 (92%), Positives = 37/40 (92%)
 Frame = -1

Query: 122  GYEWGRANKDTGGNPHGYLPTHYEKVQMLLSDRFLGFYMI 3
            GYEWGR NKDTG NPHGYLPTHYEKVQMLLSDRF GFYMI
Sbjct: 2246 GYEWGRVNKDTGSNPHGYLPTHYEKVQMLLSDRFFGFYMI 2285


>ref|XP_004135844.1| PREDICTED: pre-mRNA-processing-splicing factor 8-like [Cucumis
            sativus]
          Length = 2347

 Score =  134 bits (338), Expect(2) = 1e-49
 Identities = 58/62 (93%), Positives = 62/62 (100%)
 Frame = -3

Query: 411  HEFLNDLEPLGWMHTQPNELPQLSPQDLTNHARILENNKQWDGDKCIILTCSFTPGSCSL 232
            H+FLNDLEPLGWMHTQPNELPQLSPQDLTNHA++LENNKQWDG+KCIILTCSFTPGSCSL
Sbjct: 2178 HDFLNDLEPLGWMHTQPNELPQLSPQDLTNHAKVLENNKQWDGEKCIILTCSFTPGSCSL 2237

Query: 231  TA 226
            TA
Sbjct: 2238 TA 2239



 Score = 87.0 bits (214), Expect(2) = 1e-49
 Identities = 37/40 (92%), Positives = 37/40 (92%)
 Frame = -1

Query: 122  GYEWGRANKDTGGNPHGYLPTHYEKVQMLLSDRFLGFYMI 3
            GYEWGR NKDTG NPHGYLPTHYEKVQMLLSDRF GFYMI
Sbjct: 2246 GYEWGRVNKDTGSNPHGYLPTHYEKVQMLLSDRFFGFYMI 2285


>ref|XP_002517654.1| Pre-mRNA-processing-splicing factor, putative [Ricinus communis]
            gi|223543286|gb|EEF44818.1| Pre-mRNA-processing-splicing
            factor, putative [Ricinus communis]
          Length = 2376

 Score =  133 bits (334), Expect(2) = 2e-49
 Identities = 59/62 (95%), Positives = 61/62 (98%)
 Frame = -3

Query: 411  HEFLNDLEPLGWMHTQPNELPQLSPQDLTNHARILENNKQWDGDKCIILTCSFTPGSCSL 232
            H+FLNDLEPLGWMHTQPNELPQLSPQDLT HARILENNKQWDG+KCIILTCSFTPGSCSL
Sbjct: 2207 HDFLNDLEPLGWMHTQPNELPQLSPQDLTAHARILENNKQWDGEKCIILTCSFTPGSCSL 2266

Query: 231  TA 226
            TA
Sbjct: 2267 TA 2268



 Score = 88.2 bits (217), Expect(2) = 2e-49
 Identities = 37/40 (92%), Positives = 38/40 (95%)
 Frame = -1

Query: 122  GYEWGRANKDTGGNPHGYLPTHYEKVQMLLSDRFLGFYMI 3
            GYEWGR NKDTG NPHGYLPTHYEKVQMLLSDRFLGFYM+
Sbjct: 2275 GYEWGRVNKDTGSNPHGYLPTHYEKVQMLLSDRFLGFYMV 2314