BLASTX nr result

ID: Coptis25_contig00004894 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00004894
         (400 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003622614.1| TNP2 [Medicago truncatula] gi|355497629|gb|A...    88   6e-16
emb|CAN72364.1| hypothetical protein VITISV_016465 [Vitis vinifera]    87   1e-15
ref|XP_003631713.1| PREDICTED: uncharacterized protein LOC100263...    86   4e-15
ref|XP_004161633.1| PREDICTED: uncharacterized protein LOC101223...    84   9e-15
ref|XP_002265103.2| PREDICTED: uncharacterized protein LOC100241...    84   1e-14

>ref|XP_003622614.1| TNP2 [Medicago truncatula] gi|355497629|gb|AES78832.1| TNP2
           [Medicago truncatula]
          Length = 745

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 57/130 (43%), Positives = 76/130 (58%), Gaps = 1/130 (0%)
 Frame = -3

Query: 398 DSGVCMKAITTFTSSRKDKNPIDASTKWYGVIEQIIELDYMTFQHVVFYCNWVRVEDKTN 219
           +SGV + A +   SS KDKNPI AST +YGVIE+I ELDY TF   +F C W+   D  N
Sbjct: 129 NSGVMVVAESMHFSSSKDKNPIMASTPYYGVIEEIWELDYTTFTVPIFKCKWI---DINN 185

Query: 218 GCKLCPDSNLVMVNLNRLKSVDQYFDEPVILASETSQVFYSEDLRNPNWWVVINSPRRLT 39
           G ++  +    +V+L++      Y DEP I+AS+  QVFY  D  N  W VV+ +  + T
Sbjct: 186 GVRI-DELGYTLVDLSKA----AYRDEPFIMASQAKQVFYVTDPSNKRWSVVLQT--KNT 238

Query: 38  SRVDE-LDAP 12
              DE LD P
Sbjct: 239 HGSDETLDIP 248


>emb|CAN72364.1| hypothetical protein VITISV_016465 [Vitis vinifera]
          Length = 593

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 46/120 (38%), Positives = 73/120 (60%), Gaps = 1/120 (0%)
 Frame = -3

Query: 398 DSGVCMKAITTFTSSRKDKNPIDASTKWYGVIEQIIELDYMT-FQHVVFYCNWVRVEDKT 222
           +SG+C+ ++TTF SS KD++ ID +  +YGV + II L+Y   ++ V+F C+WV+     
Sbjct: 268 NSGICIDSMTTFRSSSKDESSIDEAIIYYGVFKDIIXLEYHEGYKLVLFKCDWVK----- 322

Query: 221 NGCKLCPDSNLVMVNLNRLKSVDQYFDEPVILASETSQVFYSEDLRNPNWWVVINSPRRL 42
                  +SN+ MVNL+ +   D   DEP ILA    QV YS+D +  NW +V++ P ++
Sbjct: 323 -------ESNJRMVNLSNMIRFDLLDDEPFILAKHARQVLYSKDPKVHNWHIVLDVPPKI 375


>ref|XP_003631713.1| PREDICTED: uncharacterized protein LOC100263769 [Vitis vinifera]
          Length = 1493

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 48/131 (36%), Positives = 78/131 (59%)
 Frame = -3

Query: 398  DSGVCMKAITTFTSSRKDKNPIDASTKWYGVIEQIIELDYMTFQHVVFYCNWVRVEDKTN 219
            +SGV + A T   +S KDKNP+     +YGV+++I +LDY  F+  +F C+WV   D  N
Sbjct: 1138 NSGVSILAGTMQIASSKDKNPVFGELCFYGVVKEIWDLDYNMFRIPIFKCDWV---DNKN 1194

Query: 218  GCKLCPDSNLVMVNLNRLKSVDQYFDEPVILASETSQVFYSEDLRNPNWWVVINSPRRLT 39
            G K+  +    +V+ +++     +  +P ILAS+  QVFY ED  +P W +V++ P +  
Sbjct: 1195 GIKV-DELGFTLVDFSKI----SHKSDPFILASQAKQVFYVEDQLDPKWSIVLSIPPKDF 1249

Query: 38   SRVDELDAPTD 6
            + ++ELD  TD
Sbjct: 1250 NNMEELDDFTD 1260


>ref|XP_004161633.1| PREDICTED: uncharacterized protein LOC101223491 [Cucumis sativus]
          Length = 288

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 50/118 (42%), Positives = 68/118 (57%)
 Frame = -3

Query: 398 DSGVCMKAITTFTSSRKDKNPIDASTKWYGVIEQIIELDYMTFQHVVFYCNWVRVEDKTN 219
           +SGV + A T   SS KDKNP+     +YGVI++I EL+Y TF   VF C+WV    + N
Sbjct: 126 NSGVSLVAKTMQVSSSKDKNPVIGDMSFYGVIQEIWELNYNTFNVPVFKCHWV----QNN 181

Query: 218 GCKLCPDSNLVMVNLNRLKSVDQYFDEPVILASETSQVFYSEDLRNPNWWVVINSPRR 45
           G     +   V+V+LNR+      F    ILAS+  QVF+ EDL +  W VV+  P+R
Sbjct: 182 GGVRIDELGYVLVDLNRVGHKSDSF----ILASQAKQVFHVEDLSDVRWSVVLTPPQR 235


>ref|XP_002265103.2| PREDICTED: uncharacterized protein LOC100241310 [Vitis vinifera]
          Length = 1456

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 47/118 (39%), Positives = 70/118 (59%)
 Frame = -3

Query: 398  DSGVCMKAITTFTSSRKDKNPIDASTKWYGVIEQIIELDYMTFQHVVFYCNWVRVEDKTN 219
            +SGV + A T   SS KDKNP+     +YG+I +I +LDY  F+  VF CNWV   D  +
Sbjct: 747  NSGVSIVATTMQISSAKDKNPVFGELCFYGIITEIWDLDYTMFRIPVFKCNWV---DNKS 803

Query: 218  GCKLCPDSNLVMVNLNRLKSVDQYFDEPVILASETSQVFYSEDLRNPNWWVVINSPRR 45
            G K+  +  L +V+  ++     +  +P ILAS+  QVFY +D  +P W VV+++P R
Sbjct: 804  GIKV-DEFGLTLVDFTKM----AHKSDPFILASQAKQVFYVQDQLDPRWSVVLSTPER 856


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