BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00004892
         (558 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAB01845.1| non-LTR retroelement reverse transcriptase-like ...   192   3e-47
emb|CAA66812.1| non-ltr retrotransposon reverse transcriptase-li...   192   3e-47
dbj|BAF01687.1| hypothetical protein [Arabidopsis thaliana]           191   7e-47
dbj|BAA97290.1| non-LTR retroelement reverse transcriptase-like ...   191   7e-47
gb|AAG50806.1|AC079281_8 unknown protein [Arabidopsis thaliana]       188   4e-46

>dbj|BAB01845.1| non-LTR retroelement reverse transcriptase-like protein [Arabidopsis
            thaliana]
          Length = 893

 Score =  192 bits (488), Expect = 3e-47
 Identities = 80/185 (43%), Positives = 135/185 (72%)
 Frame = -1

Query: 555  KVVRNFFISGQMLQEVNSTCITLVPKVQSPSNLGDYKPIACCGVMYKSITKVMTRRMKQI 376
            + V+ FF SGQ+L++ N+T + L+PK+ + S + D++PI+C   +YK I K++T R+K++
Sbjct: 489  EAVQEFFRSGQLLKQWNATTLVLIPKITNSSKMTDFRPISCLNTLYKVIAKLLTSRLKKL 548

Query: 375  MPKVINMNQSAFITGRSIQDNILLSHELMHNYHRNETPPRCATKVDLRKAYDTVRWEAVT 196
            + +VI+ +QSAF+ GR + +N+LL+ E++H Y+      R   KVDLRKA+D+VRW+ + 
Sbjct: 549  LNEVISPSQSAFLPGRLLSENVLLATEIVHGYNTKNISSRGMLKVDLRKAFDSVRWDFII 608

Query: 195  FAMKRVGMPQKFIEWVKVCVETASYSIMINGAPYGYFKGRRGIRQGDPMSPYLFVLVMDL 16
             A + + +P+KF+ W+  C+ T  +S+M+NG+  G+FK  +G+RQGDP+SPYLFVL M++
Sbjct: 609  SAFRALAVPEKFVCWINQCISTPYFSVMVNGSSSGFFKSNKGLRQGDPLSPYLFVLAMEV 668

Query: 15   FSEIM 1
            FS ++
Sbjct: 669  FSSLL 673


>emb|CAA66812.1| non-ltr retrotransposon reverse transcriptase-like protein
            [Arabidopsis thaliana]
          Length = 893

 Score =  192 bits (488), Expect = 3e-47
 Identities = 80/185 (43%), Positives = 135/185 (72%)
 Frame = -1

Query: 555  KVVRNFFISGQMLQEVNSTCITLVPKVQSPSNLGDYKPIACCGVMYKSITKVMTRRMKQI 376
            + V+ FF SGQ+L++ N+T + L+PK+ + S + D++PI+C   +YK I K++T R+K++
Sbjct: 489  EAVQEFFRSGQLLKQWNATTLVLIPKITNSSKMTDFRPISCLNTLYKVIAKLLTSRLKKL 548

Query: 375  MPKVINMNQSAFITGRSIQDNILLSHELMHNYHRNETPPRCATKVDLRKAYDTVRWEAVT 196
            + +VI+ +QSAF+ GR + +N+LL+ E++H Y+      R   KVDLRKA+D+VRW+ + 
Sbjct: 549  LNEVISPSQSAFLPGRLLSENVLLATEIVHGYNTKNISSRGMLKVDLRKAFDSVRWDFII 608

Query: 195  FAMKRVGMPQKFIEWVKVCVETASYSIMINGAPYGYFKGRRGIRQGDPMSPYLFVLVMDL 16
             A + + +P+KF+ W+  C+ T  +S+M+NG+  G+FK  +G+RQGDP+SPYLFVL M++
Sbjct: 609  SAFRALAVPEKFVCWINQCISTPYFSVMVNGSSSGFFKSNKGLRQGDPLSPYLFVLAMEV 668

Query: 15   FSEIM 1
            FS ++
Sbjct: 669  FSSLL 673


>dbj|BAF01687.1| hypothetical protein [Arabidopsis thaliana]
          Length = 1072

 Score =  191 bits (485), Expect = 7e-47
 Identities = 79/186 (42%), Positives = 136/186 (73%)
 Frame = -1

Query: 558 IKVVRNFFISGQMLQEVNSTCITLVPKVQSPSNLGDYKPIACCGVMYKSITKVMTRRMKQ 379
           +  +  FF SGQ+L++ N+T + L+PK  +   + +++PI+C   +YK I+K++T R++ 
Sbjct: 347 LAAIHEFFDSGQLLKQWNATTLVLIPKTSNACTISEFRPISCLNTLYKVISKLLTSRLQG 406

Query: 378 IMPKVINMNQSAFITGRSIQDNILLSHELMHNYHRNETPPRCATKVDLRKAYDTVRWEAV 199
           ++  VI  +QSAF+ GRS+ +N+LL+ E++H Y+R    PR   KVDL+KA+D+V+WE V
Sbjct: 407 LLSAVIGHSQSAFLPGRSLAENVLLATEMVHGYNRLNISPRGMLKVDLKKAFDSVKWEFV 466

Query: 198 TFAMKRVGMPQKFIEWVKVCVETASYSIMINGAPYGYFKGRRGIRQGDPMSPYLFVLVMD 19
           T A++ + +P+++I W+  C+ T S++I +NGA  G+F+  +G+RQGDP+SPYLFVL M+
Sbjct: 467 TAALRALAIPERYINWIHQCITTPSFTISVNGATGGFFRSTKGLRQGDPLSPYLFVLAME 526

Query: 18  LFSEIM 1
           +FS+++
Sbjct: 527 VFSKLL 532


>dbj|BAA97290.1| non-LTR retroelement reverse transcriptase-like [Arabidopsis
           thaliana]
          Length = 1072

 Score =  191 bits (485), Expect = 7e-47
 Identities = 79/186 (42%), Positives = 136/186 (73%)
 Frame = -1

Query: 558 IKVVRNFFISGQMLQEVNSTCITLVPKVQSPSNLGDYKPIACCGVMYKSITKVMTRRMKQ 379
           +  +  FF SGQ+L++ N+T + L+PK  +   + +++PI+C   +YK I+K++T R++ 
Sbjct: 347 LAAIHEFFDSGQLLKQWNATTLVLIPKTSNACTISEFRPISCLNTLYKVISKLLTSRLQG 406

Query: 378 IMPKVINMNQSAFITGRSIQDNILLSHELMHNYHRNETPPRCATKVDLRKAYDTVRWEAV 199
           ++  VI  +QSAF+ GRS+ +N+LL+ E++H Y+R    PR   KVDL+KA+D+V+WE V
Sbjct: 407 LLSAVIGHSQSAFLPGRSLAENVLLATEMVHGYNRLNISPRGMLKVDLKKAFDSVKWEFV 466

Query: 198 TFAMKRVGMPQKFIEWVKVCVETASYSIMINGAPYGYFKGRRGIRQGDPMSPYLFVLVMD 19
           T A++ + +P+++I W+  C+ T S++I +NGA  G+F+  +G+RQGDP+SPYLFVL M+
Sbjct: 467 TAALRALAIPERYINWIHQCITTPSFTISVNGATGGFFRSTKGLRQGDPLSPYLFVLAME 526

Query: 18  LFSEIM 1
           +FS+++
Sbjct: 527 VFSKLL 532


>gb|AAG50806.1|AC079281_8 unknown protein [Arabidopsis thaliana]
          Length = 1213

 Score =  188 bits (478), Expect = 4e-46
 Identities = 80/183 (43%), Positives = 133/183 (72%)
 Frame = -1

Query: 549  VRNFFISGQMLQEVNSTCITLVPKVQSPSNLGDYKPIACCGVMYKSITKVMTRRMKQIMP 370
            ++ FF SG +L++ N+T I L+PK+ +P+   D++PI+C   +YK I +++T R+++++ 
Sbjct: 490  IKEFFSSGCLLKQWNATTIVLIPKIVNPTCTSDFRPISCLNTLYKVIARLLTDRLQRLLS 549

Query: 369  KVINMNQSAFITGRSIQDNILLSHELMHNYHRNETPPRCATKVDLRKAYDTVRWEAVTFA 190
             VI+  QSAF+ GRS+ +N+LL+ +L+H Y+ +   PR   KVDL+KA+D+VRWE V  A
Sbjct: 550  GVISSAQSAFLPGRSLAENVLLATDLVHGYNWSNISPRGMLKVDLKKAFDSVRWEFVIAA 609

Query: 189  MKRVGMPQKFIEWVKVCVETASYSIMINGAPYGYFKGRRGIRQGDPMSPYLFVLVMDLFS 10
            ++ + +P+KFI W+  C+ T ++++ ING   G+FK  +G+RQGDP+SPYLFVL M+ FS
Sbjct: 610  LRALAIPEKFINWISQCISTPTFTVSINGGNGGFFKSTKGLRQGDPLSPYLFVLAMEAFS 669

Query: 9    EIM 1
             ++
Sbjct: 670  NLL 672