BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00004881
         (1286 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI30774.3| unnamed protein product [Vitis vinifera]              356   8e-96
ref|XP_002316747.1| predicted protein [Populus trichocarpa] gi|2...   335   1e-89
ref|XP_004164255.1| PREDICTED: pentatricopeptide repeat-containi...   323   5e-86
ref|XP_003546058.1| PREDICTED: pentatricopeptide repeat-containi...   322   1e-85
gb|ACU23441.1| unknown [Glycine max]                                  322   1e-85

>emb|CBI30774.3| unnamed protein product [Vitis vinifera]
          Length = 277

 Score =  356 bits (913), Expect = 8e-96
 Identities = 183/271 (67%), Positives = 207/271 (76%), Gaps = 6/271 (2%)
 Frame = +1

Query: 49  LCFNSSNYIFLQTQN-----GLTPLAKVARVHYVKCLNNP-SRREVPSSYTNAIXXXXXX 210
           +C +  + I   TQ+       +P  KV  + +VKC +NP S R V    +  +      
Sbjct: 14  ICLHRCSSIQTITQHPFSSFSFSPFHKVTSMRHVKCCHNPPSYRAVEKEISKKVGKKEHH 73

Query: 211 XXXXXXXXXLWMKKDSVGSGQKALNLVRIVSELPNEKEAVYAALDKWTAWEAEFPLVAAA 390
                    LW K+DS+GSGQKALNLVRIVSELPNEKEAVY ALDKWTAWE EFPL+AAA
Sbjct: 74  ---------LWRKRDSIGSGQKALNLVRIVSELPNEKEAVYGALDKWTAWETEFPLIAAA 124

Query: 391 KALRILQKRNQWLRVIQVGKWLLSKGQGLTMGTYDTLLLAFDVDQRIDEAESLWNMIVHM 570
           KALRIL+KRNQW RVIQV KW+LSKGQG TMGTYDTLLLAFD+D R+DEAESLWNMI+H 
Sbjct: 125 KALRILRKRNQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDWRVDEAESLWNMILHT 184

Query: 571 HTRSVSKRLFSRMITLYDHHSMPAKIIEVFADMEELGVKPDEDTTRRVAHAFLKLGDEGK 750
           HTRS+SK+LFSRMI+LYDHH M  K+IEVFADMEELGVKPDEDT RRVA AF  LG E K
Sbjct: 185 HTRSISKQLFSRMISLYDHHDMRDKVIEVFADMEELGVKPDEDTVRRVACAFQTLGQEDK 244

Query: 751 QKLVLKKYLNKWKYIHFNGERVKVRREAWVE 843
           QKLVLKKY  KWKYIHFNGERV+VRR+AW E
Sbjct: 245 QKLVLKKYQCKWKYIHFNGERVRVRRDAWDE 275


>ref|XP_002316747.1| predicted protein [Populus trichocarpa] gi|222859812|gb|EEE97359.1|
           predicted protein [Populus trichocarpa]
          Length = 272

 Score =  335 bits (859), Expect = 1e-89
 Identities = 159/202 (78%), Positives = 181/202 (89%)
 Frame = +1

Query: 238 LWMKKDSVGSGQKALNLVRIVSELPNEKEAVYAALDKWTAWEAEFPLVAAAKALRILQKR 417
           LW K+DS GSGQKALNLVRIVSELPNEKEAVY ALDKWTAWE EFPL+AAAKAL+ILQ+R
Sbjct: 70  LWQKRDSAGSGQKALNLVRIVSELPNEKEAVYGALDKWTAWETEFPLIAAAKALKILQQR 129

Query: 418 NQWLRVIQVGKWLLSKGQGLTMGTYDTLLLAFDVDQRIDEAESLWNMIVHMHTRSVSKRL 597
            QW RVIQV KW+LSKGQG T+GTYDTLLLAFD D R+DEA+SLWNMI+H+HTRS+SKRL
Sbjct: 130 RQWTRVIQVAKWMLSKGQGATLGTYDTLLLAFDKDDRVDEAKSLWNMIIHVHTRSMSKRL 189

Query: 598 FSRMITLYDHHSMPAKIIEVFADMEELGVKPDEDTTRRVAHAFLKLGDEGKQKLVLKKYL 777
           FSRMI+LYDHH+M  +IIEVFADMEELGV+PDEDT  RVA AF KLG E K++LVL++YL
Sbjct: 190 FSRMISLYDHHNMQDEIIEVFADMEELGVRPDEDTVWRVARAFKKLGQEEKRELVLERYL 249

Query: 778 NKWKYIHFNGERVKVRREAWVE 843
            KWKYIHFNGERV+V+R+ W E
Sbjct: 250 CKWKYIHFNGERVRVKRDGWNE 271


>ref|XP_004164255.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18975,
           chloroplastic-like [Cucumis sativus]
          Length = 270

 Score =  323 bits (829), Expect = 5e-86
 Identities = 152/202 (75%), Positives = 175/202 (86%)
 Frame = +1

Query: 238 LWMKKDSVGSGQKALNLVRIVSELPNEKEAVYAALDKWTAWEAEFPLVAAAKALRILQKR 417
           LW K+DS GSGQKALNLVRIVS+ PNEKEAVY  L+KW AWE EFPL+AAAKALRIL+KR
Sbjct: 66  LWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGELNKWIAWETEFPLIAAAKALRILRKR 125

Query: 418 NQWLRVIQVGKWLLSKGQGLTMGTYDTLLLAFDVDQRIDEAESLWNMIVHMHTRSVSKRL 597
           +QW RVIQV KW+LSKGQG TMGTYDTLLLAFD+D+R+DEAESLWNMI+H HTRS+SKR+
Sbjct: 126 SQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHTHTRSISKRV 185

Query: 598 FSRMITLYDHHSMPAKIIEVFADMEELGVKPDEDTTRRVAHAFLKLGDEGKQKLVLKKYL 777
           FSRMI+LY+HH +  KIIE+FADMEELGVKPDEDT RRV  AF KLG E  +K+V K+Y 
Sbjct: 186 FSRMISLYEHHDLQDKIIEIFADMEELGVKPDEDTVRRVCRAFQKLGQEDNRKMVYKRYS 245

Query: 778 NKWKYIHFNGERVKVRREAWVE 843
            +WKYIHF GERV+VRR+ W E
Sbjct: 246 CQWKYIHFKGERVRVRRDGWDE 267


>ref|XP_003546058.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18975,
           chloroplastic-like [Glycine max]
          Length = 288

 Score =  322 bits (825), Expect = 1e-85
 Identities = 153/200 (76%), Positives = 175/200 (87%)
 Frame = +1

Query: 238 LWMKKDSVGSGQKALNLVRIVSELPNEKEAVYAALDKWTAWEAEFPLVAAAKALRILQKR 417
           LW  +DS  SGQKAL LVR V +LPNEKEAVY ALDKWTAWE EFP++A +KAL+IL+KR
Sbjct: 82  LWKSRDSAQSGQKALALVRTVYKLPNEKEAVYGALDKWTAWETEFPVIAVSKALKILRKR 141

Query: 418 NQWLRVIQVGKWLLSKGQGLTMGTYDTLLLAFDVDQRIDEAESLWNMIVHMHTRSVSKRL 597
             W+RVIQV KW+LSKGQG TMGTYDTLLLAFD+D+R+DEAESLWNMI+H H RSVSKRL
Sbjct: 142 GHWVRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMIIHAHMRSVSKRL 201

Query: 598 FSRMITLYDHHSMPAKIIEVFADMEELGVKPDEDTTRRVAHAFLKLGDEGKQKLVLKKYL 777
           FSRMI+LYDHH+MP KII+VFADMEEL +KPDEDT RRVA AF +LGDE K+KLV+K+Y 
Sbjct: 202 FSRMISLYDHHNMPDKIIDVFADMEELRLKPDEDTVRRVARAFRELGDEEKRKLVIKQYG 261

Query: 778 NKWKYIHFNGERVKVRREAW 837
            KWKYIHFNGERV+VR EAW
Sbjct: 262 LKWKYIHFNGERVRVRTEAW 281


>gb|ACU23441.1| unknown [Glycine max]
          Length = 288

 Score =  322 bits (825), Expect = 1e-85
 Identities = 153/200 (76%), Positives = 175/200 (87%)
 Frame = +1

Query: 238 LWMKKDSVGSGQKALNLVRIVSELPNEKEAVYAALDKWTAWEAEFPLVAAAKALRILQKR 417
           LW  +DS  SGQKAL LVR V +LPNEKEAVY ALDKWTAWE EFP++A +KAL+IL+KR
Sbjct: 82  LWKSRDSAQSGQKALALVRTVYKLPNEKEAVYGALDKWTAWETEFPVIAVSKALKILRKR 141

Query: 418 NQWLRVIQVGKWLLSKGQGLTMGTYDTLLLAFDVDQRIDEAESLWNMIVHMHTRSVSKRL 597
             W+RVIQV KW+LSKGQG TMGTYDTLLLAFD+D+R+DEAESLWNMI+H H RSVSKRL
Sbjct: 142 GHWVRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMIIHAHLRSVSKRL 201

Query: 598 FSRMITLYDHHSMPAKIIEVFADMEELGVKPDEDTTRRVAHAFLKLGDEGKQKLVLKKYL 777
           FSRMI+LYDHH+MP KII+VFADMEEL +KPDEDT RRVA AF +LGDE K+KLV+K+Y 
Sbjct: 202 FSRMISLYDHHNMPDKIIDVFADMEELRLKPDEDTVRRVARAFRELGDEEKRKLVIKQYG 261

Query: 778 NKWKYIHFNGERVKVRREAW 837
            KWKYIHFNGERV+VR EAW
Sbjct: 262 LKWKYIHFNGERVRVRTEAW 281