BLASTX nr result

ID: Coptis25_contig00004868 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00004868
         (1081 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282662.1| PREDICTED: uncharacterized protein LOC100266...   156   1e-35
ref|XP_002531622.1| conserved hypothetical protein [Ricinus comm...   153   8e-35
gb|ABW74476.1| unknown [Paeonia suffruticosa]                         152   1e-34
gb|ADK13069.1| conserved hypothetical protein 12 [Hevea brasilie...   151   2e-34
gb|ADK13070.1| conserved hypothetical protein 13 [Hevea brasilie...   151   3e-34

>ref|XP_002282662.1| PREDICTED: uncharacterized protein LOC100266248 [Vitis vinifera]
           gi|297737814|emb|CBI27015.3| unnamed protein product
           [Vitis vinifera]
          Length = 174

 Score =  156 bits (394), Expect = 1e-35
 Identities = 88/180 (48%), Positives = 111/180 (61%), Gaps = 4/180 (2%)
 Frame = +3

Query: 39  QNALAAACEEMKXXXXXXXXXXXDRRDFVVCPKPRRLGVLNHSMNDPIRTLRWQLSHQVE 218
           Q    AACEEM+           +RR  VVCPKPRRLG+LN ++ DP+R +RW LS+Q E
Sbjct: 3   QYCALAACEEMRRSVPAS-----ERRAPVVCPKPRRLGLLNATIVDPLRPIRWHLSNQTE 57

Query: 219 VNESKAGVDLMELILSKGGNGAEQSAATHVAXXXXXXXXXXXXRATNPLIQDARFGEEKX 398
           +++SK+G DL+++IL+KGG GAE  + T VA            R  NPLIQDARFG+EK 
Sbjct: 58  LSDSKSGTDLLDIILAKGGYGAE--SCTQVASSPPFFSGSPPSRVANPLIQDARFGDEKL 115

Query: 399 XXXXXXXXXXXXXXXXXTT----RKGCVRAKFGHKPAAVRIEGFDCLDRDRRNCSIPAVA 566
                             +    + GC+RA FG+ P AVRIEGFDCLDRDRRNCSIPA+A
Sbjct: 116 NPISPPLVSVPSGLSSSPSSSARKGGCIRANFGNNP-AVRIEGFDCLDRDRRNCSIPALA 174


>ref|XP_002531622.1| conserved hypothetical protein [Ricinus communis]
           gi|223528740|gb|EEF30750.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 189

 Score =  153 bits (386), Expect = 8e-35
 Identities = 93/194 (47%), Positives = 116/194 (59%), Gaps = 11/194 (5%)
 Frame = +3

Query: 18  MTQCVYQQNALAAACEEMKXXXXXXXXXXXDRRDFVVCPKPRRLGVLNHSMND-PIRTLR 194
           M QC  Q +A +   EE++           +RRD VVCPKPRR G+ N S+ND P+R+LR
Sbjct: 1   MKQCAIQTSAFSTR-EEIRSSVSGTMS---ERRDPVVCPKPRRFGLFNASVNDHPVRSLR 56

Query: 195 WQLSHQVEVNESKAGVDLMELILSKGG-NGAEQSAATHVA-XXXXXXXXXXXXRATNPLI 368
           W LSHQ E+ ESKAG DL+++IL+KGG  G EQ + T VA             R  NPLI
Sbjct: 57  WHLSHQTEICESKAGNDLLDIILTKGGCYGVEQQSCTQVASSPPPFFCGSPPSRVANPLI 116

Query: 369 QDARFGEEKXXXXXXXXXXXXXXXXXXTT--------RKGCVRAKFGHKPAAVRIEGFDC 524
           QDARFGEE+                  ++        + GCVRA FG+KP AVR+EGFDC
Sbjct: 117 QDARFGEEELSPISPLMPMPIQPPSSSSSSSPTSSGRKGGCVRANFGNKP-AVRVEGFDC 175

Query: 525 LDRDRRNCSIPAVA 566
           LDRDRR+CSIPA+A
Sbjct: 176 LDRDRRSCSIPALA 189


>gb|ABW74476.1| unknown [Paeonia suffruticosa]
          Length = 183

 Score =  152 bits (385), Expect = 1e-34
 Identities = 88/188 (46%), Positives = 111/188 (59%), Gaps = 5/188 (2%)
 Frame = +3

Query: 18  MTQCVYQQNALAAACEEMKXXXXXXXXXXXDRRDFVVCPKPRRLGVLNHSMNDPIRTLRW 197
           M  C  QQ  + AA EEM+           DRRD VVCPKPRR+G+L+ +++DPIR LRW
Sbjct: 1   MNHCAIQQQNVYAAREEMRSPVSIPMS---DRRDSVVCPKPRRMGLLDSTISDPIRPLRW 57

Query: 198 QLS-HQVEVNESKAGVDLMELILSKGGNGAEQSAATHVAXXXXXXXXXXXXRATNPLIQD 374
            LS HQ E ++S+AG DL+++ILSKGG   EQS    +A            R  NP++ D
Sbjct: 58  HLSHHQSEYSDSRAGTDLLDIILSKGGYSVEQS-GNQLASSPPFFSGSPPSRVANPVVLD 116

Query: 375 ARFGEEKXXXXXXXXXXXXXXXXXXTT----RKGCVRAKFGHKPAAVRIEGFDCLDRDRR 542
           ARFG+EK                   +    + GC+RA +G KP  VRIEGFDCLDRDRR
Sbjct: 117 ARFGDEKITPSAPLQPLLSPGPSSSPSSSARKGGCLRANYGSKP-VVRIEGFDCLDRDRR 175

Query: 543 NCSIPAVA 566
           NCSIPA+A
Sbjct: 176 NCSIPALA 183


>gb|ADK13069.1| conserved hypothetical protein 12 [Hevea brasiliensis]
          Length = 176

 Score =  151 bits (382), Expect = 2e-34
 Identities = 88/184 (47%), Positives = 113/184 (61%), Gaps = 1/184 (0%)
 Frame = +3

Query: 18  MTQCVYQQNALAAACEEMKXXXXXXXXXXXDRRDFVVCPKPRRLGVLNHSMNDPIRTLRW 197
           M Q    +NA+A+ C++ +           D +  VVCPKPRR+G+L    N+P R LRW
Sbjct: 1   MNQFNLHKNAIAS-CDQTETRGLVSIF---DSKGPVVCPKPRRVGIL---ANNPSRPLRW 53

Query: 198 QLSHQVEVNESKAGVDLMELILSKGGNGAEQSAATHVAXXXXXXXXXXXXRATNPLIQDA 377
            +SHQ E+ +SKAG +L+++IL K G+G EQSA  HVA            RA NP+IQDA
Sbjct: 54  HMSHQAEMCDSKAGAELLDIILMKDGHGTEQSA-NHVASPLPFFCGSPPTRAANPVIQDA 112

Query: 378 RFGEEKXXXXXXXXXXXXXXXXXXTTRKG-CVRAKFGHKPAAVRIEGFDCLDRDRRNCSI 554
           RFG+EK                  T+RKG CVR KFG KPAAVR+EGFDCL+RDR+N SI
Sbjct: 113 RFGDEKLTPVSPLLIPSPSSLSSPTSRKGGCVRMKFGLKPAAVRVEGFDCLNRDRQNSSI 172

Query: 555 PAVA 566
           PA+A
Sbjct: 173 PAMA 176


>gb|ADK13070.1| conserved hypothetical protein 13 [Hevea brasiliensis]
          Length = 176

 Score =  151 bits (381), Expect = 3e-34
 Identities = 82/154 (53%), Positives = 101/154 (65%), Gaps = 1/154 (0%)
 Frame = +3

Query: 108 DRRDFVVCPKPRRLGVLNHSMNDPIRTLRWQLSHQVEVNESKAGVDLMELILSKGGNGAE 287
           D +  VVCPKPRR+G+L    N+P R LRW +SHQ E+ +SKAG +L+++IL K G+G E
Sbjct: 27  DSKGPVVCPKPRRVGIL---ANNPSRPLRWHMSHQAEMCDSKAGAELLDIILMKDGHGTE 83

Query: 288 QSAATHVAXXXXXXXXXXXXRATNPLIQDARFGEEKXXXXXXXXXXXXXXXXXXTTRKG- 464
           QSA  HVA            RA NP+IQDARFG+EK                  T+RKG 
Sbjct: 84  QSA-NHVASPLPFFCGSPPTRAANPVIQDARFGDEKLTPVSPLLIPSPSSLSSPTSRKGG 142

Query: 465 CVRAKFGHKPAAVRIEGFDCLDRDRRNCSIPAVA 566
           CVR KFG KPAAVR+EGFDCL+RDR+N SIPA+A
Sbjct: 143 CVRMKFGLKPAAVRVEGFDCLNRDRQNSSIPAMA 176


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