BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00004865
         (848 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI34953.3| unnamed protein product [Vitis vinifera]               77   6e-12
ref|XP_002275112.1| PREDICTED: DNA repair protein UVH3-like [Vit...    77   6e-12
ref|XP_004141182.1| PREDICTED: DNA repair protein UVH3-like [Cuc...    65   3e-08
ref|XP_003517957.1| PREDICTED: LOW QUALITY PROTEIN: DNA repair p...    56   9e-06

>emb|CBI34953.3| unnamed protein product [Vitis vinifera]
          Length = 1449

 Score = 76.6 bits (187), Expect = 6e-12
 Identities = 77/238 (32%), Positives = 106/238 (44%), Gaps = 30/238 (12%)
 Frame = +2

Query: 11   EMRESRRPRKQVKYTEDDPETAGLSNPTNQRDIQGLDKE-VEQEPVCEDI-CKDAGSNLS 184
            E+R S+RPRK V Y  DD E        +Q + +  ++E VE EP  + I C DA ++ S
Sbjct: 1223 EVRRSKRPRKAVNYANDDLEIDDEGKSLDQGNQKCTNEEAVELEPSRDQIICGDAAADFS 1282

Query: 185  QK------DGEPFSEDGC-DYHEKGGGFCLDEDKDENDSPQVVSTSTRFPEDVNVSLEDG 343
             K      D  P  ED C DY E  G  C+DE    N+  Q+ S       D + +  D 
Sbjct: 1283 GKNQQKAEDSSP-GEDLCGDYPETEGVMCMDE----NEIGQLDS------RDDDPTFADE 1331

Query: 344  FSADYLAMGGGFCMDEGEPD------------TEPVQLFPSPTRDLDESTGRRVDDLIIT 487
            FS DYL MGGGFC++E E D             + +   P P  +L       V  L  T
Sbjct: 1332 FSEDYLKMGGGFCVEEDEKDKDHNARTYDPAKADTIYENPDPESELAIHPAESVSSLQNT 1391

Query: 488  -------DSLNP-LNCIVDHDSTRVGVLQGDRLPKGDPSTTSTA-CLTPMPFLRRKRR 634
                    +  P     +D  +  +G+   +    GD + T+T   L  MPFLR+KRR
Sbjct: 1392 AGGFQSEPTCQPDTELNLDCPNATIGLSMPEN--TGDDTGTNTVKALRAMPFLRKKRR 1447


>ref|XP_002275112.1| PREDICTED: DNA repair protein UVH3-like [Vitis vinifera]
          Length = 1513

 Score = 76.6 bits (187), Expect = 6e-12
 Identities = 77/238 (32%), Positives = 106/238 (44%), Gaps = 30/238 (12%)
 Frame = +2

Query: 11   EMRESRRPRKQVKYTEDDPETAGLSNPTNQRDIQGLDKE-VEQEPVCEDI-CKDAGSNLS 184
            E+R S+RPRK V Y  DD E        +Q + +  ++E VE EP  + I C DA ++ S
Sbjct: 1287 EVRRSKRPRKAVNYANDDLEIDDEGKSLDQGNQKCTNEEAVELEPSRDQIICGDAAADFS 1346

Query: 185  QK------DGEPFSEDGC-DYHEKGGGFCLDEDKDENDSPQVVSTSTRFPEDVNVSLEDG 343
             K      D  P  ED C DY E  G  C+DE    N+  Q+ S       D + +  D 
Sbjct: 1347 GKNQQKAEDSSP-GEDLCGDYPETEGVMCMDE----NEIGQLDS------RDDDPTFADE 1395

Query: 344  FSADYLAMGGGFCMDEGEPD------------TEPVQLFPSPTRDLDESTGRRVDDLIIT 487
            FS DYL MGGGFC++E E D             + +   P P  +L       V  L  T
Sbjct: 1396 FSEDYLKMGGGFCVEEDEKDKDHNARTYDPAKADTIYENPDPESELAIHPAESVSSLQNT 1455

Query: 488  -------DSLNP-LNCIVDHDSTRVGVLQGDRLPKGDPSTTSTA-CLTPMPFLRRKRR 634
                    +  P     +D  +  +G+   +    GD + T+T   L  MPFLR+KRR
Sbjct: 1456 AGGFQSEPTCQPDTELNLDCPNATIGLSMPEN--TGDDTGTNTVKALRAMPFLRKKRR 1511


>ref|XP_004141182.1| PREDICTED: DNA repair protein UVH3-like [Cucumis sativus]
            gi|449489542|ref|XP_004158342.1| PREDICTED: DNA repair
            protein UVH3-like [Cucumis sativus]
          Length = 1541

 Score = 64.7 bits (156), Expect = 3e-08
 Identities = 62/239 (25%), Positives = 99/239 (41%), Gaps = 30/239 (12%)
 Frame = +2

Query: 11   EMRESRRPRKQVKYTEDDPETAGLSNPTNQRDIQGLDKEVEQEPVCEDICKDAGSNLSQK 190
            E R S R RK   Y  DD +      P++    +  + +VE++ V +D      + +SQ 
Sbjct: 1320 ERRRSSRIRKSASYAIDDAD-----QPSDHSADRFSNDKVEKDVVVQDQYTYPKTIISQS 1374

Query: 191  DGE------PFSEDGCDYHEKGGGFCLDEDKDENDSPQVVSTSTRFPEDVNVSLEDGFSA 352
                     P      DY E GGGFCL ED+                ++ + ++E   S 
Sbjct: 1375 QNTESSSRTPKQSLQNDYLETGGGFCLVEDEKSRQE---------MCQNKDSAMEANNSE 1425

Query: 353  DYLAMGGGFCMDEGEPDTEPV------------------------QLFPSPTRDLDESTG 460
            DYL +GGGFC+D+ +   +PV                          F +    +++ T 
Sbjct: 1426 DYLTIGGGFCLDDNDECVDPVAHSDQATILEAQKDDFENDLIPDQSTFSTEEHIVEKDTD 1485

Query: 461  RRVDDLIITDSLNPLNCIVDHDSTRVGVLQGDRLPKGDPSTTSTACLTPMPFLRRKRRK 637
             R++ L    + NP++   + +S++VG    +  PK          L+ MP LRRKRRK
Sbjct: 1486 ARIESLHGLGNSNPVS---NRNSSQVGE-NVEEEPKDRSVRALGGGLSAMPNLRRKRRK 1540


>ref|XP_003517957.1| PREDICTED: LOW QUALITY PROTEIN: DNA repair protein UVH3-like [Glycine
            max]
          Length = 1707

 Score = 56.2 bits (134), Expect = 9e-06
 Identities = 64/242 (26%), Positives = 95/242 (39%), Gaps = 34/242 (14%)
 Frame = +2

Query: 11   EMRESRRPRKQVKYTEDDPETAGLSNPTNQRDIQGLDKEVEQEPV--CEDICKD--AGSN 178
            ++R S R RK V Y+  +PE     +  ++R+  G  +E     +  CED   D      
Sbjct: 1483 DVRRSMRSRKPVNYSFKEPEDEDSDDSFDRRNQTGPIEENLSHILGACEDGATDFSMAKE 1542

Query: 179  LSQKDGEPFSEDGCDYHEKGGGFCLDEDKDENDSPQVVSTSTRFPEDVNVSLEDGFSADY 358
             S  +  P      D  E GG FC D  +            T  P   N    D    DY
Sbjct: 1543 CSAMNFPPEENLPTDSLESGGWFCTDAGE------------TCHPGTGNQDSSD----DY 1586

Query: 359  LAMGGGFCMDEGEP----------DTEPVQL---FPSPTRDLDEST-GRRVDDLIITDSL 496
            L MGGGFC+D+G+           DT  V     FP  +  LDE+   +   D++ + + 
Sbjct: 1587 LKMGGGFCLDDGDTGVKQDTSDNVDTATVDYNADFPHGSDYLDETNRDKSSSDILFSGAE 1646

Query: 497  NPLNCI----------------VDHDSTRVGVLQGDRLPKGDPSTTSTACLTPMPFLRRK 628
             P N I                  +D + + VL+ +       S  ST   + MPFL+R+
Sbjct: 1647 KPENGIQGGGPFNIEPNDLASASSYDHSDIAVLKQENTRNN--SGASTGAFSAMPFLKRR 1704

Query: 629  RR 634
            R+
Sbjct: 1705 RK 1706