BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00004851
         (375 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280012.1| PREDICTED: 40S ribosomal protein S13 [Vitis ...   160   1e-37
gb|AAK55664.1|AF378861_1 AT3g60770/T4C21_180 [Arabidopsis thalia...   159   2e-37
ref|NP_001234162.1| cytoplasmic ribosomal protein S13 [Solanum l...   159   2e-37
gb|ABB86273.1| cytoplasmic ribosomal protein S13-like [Solanum t...   159   2e-37
ref|NP_567104.1| 40S ribosomal protein S13-1 [Arabidopsis thalia...   159   2e-37

>ref|XP_002280012.1| PREDICTED: 40S ribosomal protein S13 [Vitis vinifera]
           gi|147820740|emb|CAN69640.1| hypothetical protein
           VITISV_028568 [Vitis vinifera]
           gi|296089171|emb|CBI38874.3| unnamed protein product
           [Vitis vinifera]
          Length = 151

 Score =  160 bits (405), Expect = 1e-37
 Identities = 79/79 (100%), Positives = 79/79 (100%)
 Frame = +1

Query: 1   VKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRI 180
           VKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRI
Sbjct: 63  VKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRI 122

Query: 181 HRLARYYKRTKKLPPVWKY 237
           HRLARYYKRTKKLPPVWKY
Sbjct: 123 HRLARYYKRTKKLPPVWKY 141


>gb|AAK55664.1|AF378861_1 AT3g60770/T4C21_180 [Arabidopsis thaliana]
           gi|15450535|gb|AAK96445.1| AT3g60770/T4C21_180
           [Arabidopsis thaliana]
          Length = 151

 Score =  159 bits (402), Expect = 2e-37
 Identities = 78/79 (98%), Positives = 79/79 (100%)
 Frame = +1

Query: 1   VKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRI 180
           VKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRI
Sbjct: 63  VKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRI 122

Query: 181 HRLARYYKRTKKLPPVWKY 237
           HRLARYYK+TKKLPPVWKY
Sbjct: 123 HRLARYYKKTKKLPPVWKY 141


>ref|NP_001234162.1| cytoplasmic ribosomal protein S13 [Solanum lycopersicum]
           gi|68449762|gb|AAY97868.1| cytoplasmic ribosomal protein
           S13 [Solanum lycopersicum]
          Length = 151

 Score =  159 bits (402), Expect = 2e-37
 Identities = 78/79 (98%), Positives = 79/79 (100%)
 Frame = +1

Query: 1   VKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRI 180
           VKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRI
Sbjct: 63  VKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRI 122

Query: 181 HRLARYYKRTKKLPPVWKY 237
           HRLARYYK+TKKLPPVWKY
Sbjct: 123 HRLARYYKKTKKLPPVWKY 141


>gb|ABB86273.1| cytoplasmic ribosomal protein S13-like [Solanum tuberosum]
          Length = 151

 Score =  159 bits (402), Expect = 2e-37
 Identities = 78/79 (98%), Positives = 79/79 (100%)
 Frame = +1

Query: 1   VKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRI 180
           VKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRI
Sbjct: 63  VKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRI 122

Query: 181 HRLARYYKRTKKLPPVWKY 237
           HRLARYYK+TKKLPPVWKY
Sbjct: 123 HRLARYYKKTKKLPPVWKY 141


>ref|NP_567104.1| 40S ribosomal protein S13-1 [Arabidopsis thaliana]
           gi|27808637|sp|P59223.1|RS131_ARATH RecName: Full=40S
           ribosomal protein S13-1
           gi|14190473|gb|AAK55717.1|AF380636_1 AT3g60770/T4C21_180
           [Arabidopsis thaliana] gi|15810101|gb|AAL06976.1|
           AT3g60770/T4C21_180 [Arabidopsis thaliana]
           gi|19699318|gb|AAL91269.1| AT3g60770/T4C21_180
           [Arabidopsis thaliana] gi|332646585|gb|AEE80106.1| 40S
           ribosomal protein S13-1 [Arabidopsis thaliana]
          Length = 151

 Score =  159 bits (402), Expect = 2e-37
 Identities = 78/79 (98%), Positives = 79/79 (100%)
 Frame = +1

Query: 1   VKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRI 180
           VKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRI
Sbjct: 63  VKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRI 122

Query: 181 HRLARYYKRTKKLPPVWKY 237
           HRLARYYK+TKKLPPVWKY
Sbjct: 123 HRLARYYKKTKKLPPVWKY 141