BLASTX nr result
ID: Coptis25_contig00004815
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00004815
(1500 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002284556.1| PREDICTED: metal transporter Nramp5 [Vitis v... 593 e-167
ref|NP_001234318.1| root-specific metal transporter [Solanum lyc... 582 e-163
gb|AAU00158.1| root-specific metal transporter [Malus baccata] 575 e-161
ref|XP_004149810.1| PREDICTED: metal transporter Nramp5-like [Cu... 568 e-159
dbj|BAM34952.1| metal transporter Nramp1 [Solanum torvum] 568 e-159
>ref|XP_002284556.1| PREDICTED: metal transporter Nramp5 [Vitis vinifera]
gi|302141782|emb|CBI18985.3| unnamed protein product
[Vitis vinifera]
Length = 542
Score = 593 bits (1530), Expect = e-167
Identities = 307/438 (70%), Positives = 338/438 (77%), Gaps = 13/438 (2%)
Frame = +1
Query: 1 TGKHLAELCKAEYPILVKYCLWLLAEVAVIAADIPEVIGTAFALNILFHIPVWAGVXXXX 180
TGKHL+ELCKAEYPI+VKYCLWLLAE+AVIAADIPEVIGTAFALNILF +PVWAGV
Sbjct: 105 TGKHLSELCKAEYPIIVKYCLWLLAEIAVIAADIPEVIGTAFALNILFKVPVWAGVLFTG 164
Query: 181 XXXXXXXXXQRYGVRKLELLIAILVFVMAGCYFGEMSYVKPPASDLLKGMFIPKLSGHGA 360
QRYGVRKLELLIA+LVF+MAGC+FGEMSYVKPPA+ +LKGMFIPKL G GA
Sbjct: 165 FSTLLLLGLQRYGVRKLELLIAVLVFIMAGCFFGEMSYVKPPATGVLKGMFIPKLKGQGA 224
Query: 361 TGDAIALLGALVMPHNLFLHSALVLSRKIPSSVQGINSACKYFLIESGFALFVA*MLR** 540
TGDAIALLGALVMPHNLFLHSALVLSRK+P+SV+GIN AC+YFLIESG ALFVA ++
Sbjct: 225 TGDAIALLGALVMPHNLFLHSALVLSRKVPNSVRGINEACRYFLIESGLALFVAFLINVA 284
Query: 541 ----------QXXXXXXXXXXXAKMTPKDAVILLKNVLGKSSSTFYAIALLASGQSSTIT 690
+ A LLKNVLG SS YAIAL ASGQSSTIT
Sbjct: 285 VVSVSGTVCSADNLSQENLDQCNDLNLNSASFLLKNVLGGSSKVVYAIALFASGQSSTIT 344
Query: 691 GTYAGQYIMQGFLDLKMKTWMRNLMTRCIAITPXXXXXXXXXXXXXXXXXXXXXMILSFE 870
GTYAGQ+IMQGFLD+KM+ W+RNLMTR IAITP MILSFE
Sbjct: 345 GTYAGQFIMQGFLDIKMRKWLRNLMTRSIAITPSLIVSIIGGSAGAGRLIIIASMILSFE 404
Query: 871 LPFALIPLLKFSSGATKMGPHKNSIYVIVISWILGFLIIGTNIYYLSTSYIDWLIHNNLP 1050
LPFALIPLLKFSS TKMGPHKNSIY+IVISWILGF IIG NIYYLSTS++ WL+HNNLP
Sbjct: 405 LPFALIPLLKFSSSNTKMGPHKNSIYIIVISWILGFGIIGINIYYLSTSFVGWLLHNNLP 464
Query: 1051 KVANVFIGIIVFPVMSIYILSVIYLTVRKDKIVTYIDPSKLDPNAQNKMENGLDSADGV- 1227
KV NVFIGIIVFP+M+IYILSVIYLT RKD +VT+I+P K DPN QN MENG D DGV
Sbjct: 465 KVGNVFIGIIVFPLMAIYILSVIYLTTRKDTVVTFIEPEKNDPNVQNHMENGFDQTDGVF 524
Query: 1228 --DHVPYRDDLADIPLPR 1275
HVPYR+DLADIPLP+
Sbjct: 525 ELGHVPYREDLADIPLPK 542
>ref|NP_001234318.1| root-specific metal transporter [Solanum lycopersicum]
gi|30267434|gb|AAP21818.1| root-specific metal
transporter [Solanum lycopersicum]
Length = 530
Score = 582 bits (1499), Expect = e-163
Identities = 306/435 (70%), Positives = 339/435 (77%), Gaps = 10/435 (2%)
Frame = +1
Query: 1 TGKHLAELCKAEYPILVKYCLWLLAEVAVIAADIPEVIGTAFALNILFHIPVWAGVXXXX 180
TGKHL+ELC+AEYP+ VKYCLWLLAEVAVIAADIPEVIGTAFALNILFHIPVWAGV
Sbjct: 101 TGKHLSELCRAEYPVFVKYCLWLLAEVAVIAADIPEVIGTAFALNILFHIPVWAGVLCTG 160
Query: 181 XXXXXXXXXQRYGVRKLELLIAILVFVMAGCYFGEMSYVKPPASDLLKGMFIPKLSGHGA 360
QRYGVRKLELLIAILVFVMA C+FGEMSYVKPPA++L KGMFIPKL+G GA
Sbjct: 161 VSTLLFIGLQRYGVRKLELLIAILVFVMAACFFGEMSYVKPPANELFKGMFIPKLNGDGA 220
Query: 361 TGDAIALLGALVMPHNLFLHSALVLSRKIPSSVQGINSACKYFLIESGFALFVA*MLR** 540
T DAIALLGALVMPHNLFLHSALVLSRKIP+SV+GIN ACK+FLIESGFALFV+ ++
Sbjct: 221 TADAIALLGALVMPHNLFLHSALVLSRKIPNSVRGINDACKFFLIESGFALFVSFLINVA 280
Query: 541 ----------QXXXXXXXXXXXAKMTPKDAVILLKNVLGKSSSTFYAIALLASGQSSTIT 690
+ +T A LLKNVLGKSSST YAIALLASGQSSTIT
Sbjct: 281 VVSVSGTVCGADNLSDQNKESCSDITLNSASFLLKNVLGKSSSTVYAIALLASGQSSTIT 340
Query: 691 GTYAGQYIMQGFLDLKMKTWMRNLMTRCIAITPXXXXXXXXXXXXXXXXXXXXXMILSFE 870
GTYAGQ+IMQGFLDLKMKTW+RNL TR IAITP MILSFE
Sbjct: 341 GTYAGQFIMQGFLDLKMKTWLRNLFTRLIAITPSLVVSIIGGSSGAGRLIIIASMILSFE 400
Query: 871 LPFALIPLLKFSSGATKMGPHKNSIYVIVISWILGFLIIGTNIYYLSTSYIDWLIHNNLP 1050
LPFALIPLLKFSS +TK+GPHKNSIY+IVISWILG IIG NIYYLST+++ WLI NNLP
Sbjct: 401 LPFALIPLLKFSSSSTKLGPHKNSIYIIVISWILGLGIIGINIYYLSTAFVGWLISNNLP 460
Query: 1051 KVANVFIGIIVFPVMSIYILSVIYLTVRKDKIVTYIDPSKLDPNAQNKMENGLDSADGVD 1230
KV NV IGI+VFP+M+IYIL+VIYL RKDK+VTYIDP K D MENG++S + VD
Sbjct: 461 KVGNVLIGIVVFPLMAIYILAVIYLMFRKDKVVTYIDPIKDD-----HMENGINSMELVD 515
Query: 1231 HVPYRDDLADIPLPR 1275
VPYR+DLADIPLP+
Sbjct: 516 RVPYREDLADIPLPQ 530
>gb|AAU00158.1| root-specific metal transporter [Malus baccata]
Length = 551
Score = 575 bits (1481), Expect = e-161
Identities = 294/435 (67%), Positives = 339/435 (77%), Gaps = 10/435 (2%)
Frame = +1
Query: 1 TGKHLAELCKAEYPILVKYCLWLLAEVAVIAADIPEVIGTAFALNILFHIPVWAGVXXXX 180
TGKHL+ELCKAEYP VKYCLWLLAEVAVIAADIPEVIGTAFALNILF+IPVW GV
Sbjct: 118 TGKHLSELCKAEYPPFVKYCLWLLAEVAVIAADIPEVIGTAFALNILFNIPVWTGVLLTG 177
Query: 181 XXXXXXXXXQRYGVRKLELLIAILVFVMAGCYFGEMSYVKPPASDLLKGMFIPKLSGHGA 360
Q+YGVRKLE+LIA+LVFVMA C+FGEMSYVKPPAS +LKGMFIPKLSG GA
Sbjct: 178 FSTLLLLGLQKYGVRKLEMLIAVLVFVMAACFFGEMSYVKPPASGVLKGMFIPKLSGQGA 237
Query: 361 TGDAIALLGALVMPHNLFLHSALVLSRKIPSSVQGINSACKYFLIESGFALFVA*MLR-- 534
TGDAIALLGAL+MPHNLFLHSALVLSRKIP+SV+G+N AC+YFLIESGFALFVA ++
Sbjct: 238 TGDAIALLGALIMPHNLFLHSALVLSRKIPNSVRGMNDACRYFLIESGFALFVAFLINVA 297
Query: 535 --------**QXXXXXXXXXXXAKMTPKDAVILLKNVLGKSSSTFYAIALLASGQSSTIT 690
Q + +T A LL+NVLG+SS YAIALLASGQSSTIT
Sbjct: 298 IISVSGTVCHQSNLSDKNNDTCSDLTLNSASFLLQNVLGRSSKILYAIALLASGQSSTIT 357
Query: 691 GTYAGQYIMQGFLDLKMKTWMRNLMTRCIAITPXXXXXXXXXXXXXXXXXXXXXMILSFE 870
GTYAGQ++MQGFLD+KMK W RNLMTRCIAITP MILSFE
Sbjct: 358 GTYAGQFVMQGFLDIKMKKWARNLMTRCIAITPSLIVSIIGGSSGAGRLIIIASMILSFE 417
Query: 871 LPFALIPLLKFSSGATKMGPHKNSIYVIVISWILGFLIIGTNIYYLSTSYIDWLIHNNLP 1050
LPFALIPLLKFS ATKMGPHKNSIY+IVISWI+G IIG NIYYLST ++ W+IH++LP
Sbjct: 418 LPFALIPLLKFSGSATKMGPHKNSIYIIVISWIIGMAIIGINIYYLSTGFVGWIIHSSLP 477
Query: 1051 KVANVFIGIIVFPVMSIYILSVIYLTVRKDKIVTYIDPSKLDPNAQNKMENGLDSADGVD 1230
KVA VFIGI+VFP+M+IYIL+V+YL +RKD +VT+++P+K DP AQN+MENGL + G
Sbjct: 478 KVATVFIGILVFPIMAIYILAVLYLALRKDSVVTFVEPTKNDPAAQNQMENGLPNY-GEP 536
Query: 1231 HVPYRDDLADIPLPR 1275
VP+R+DLAD+ LP+
Sbjct: 537 PVPFREDLADVSLPQ 551
>ref|XP_004149810.1| PREDICTED: metal transporter Nramp5-like [Cucumis sativus]
gi|449499093|ref|XP_004160719.1| PREDICTED: metal
transporter Nramp5-like [Cucumis sativus]
Length = 549
Score = 568 bits (1464), Expect = e-159
Identities = 299/437 (68%), Positives = 335/437 (76%), Gaps = 13/437 (2%)
Frame = +1
Query: 1 TGKHLAELCKAEYPILVKYCLWLLAEVAVIAADIPEVIGTAFALNILFHIPVWAGVXXXX 180
TGKHL+E+CKAEYP VKYCLWLLAEVAVIAADIPEVIGTAFALNILFHIPVWAGV
Sbjct: 112 TGKHLSEVCKAEYPKFVKYCLWLLAEVAVIAADIPEVIGTAFALNILFHIPVWAGVLLTG 171
Query: 181 XXXXXXXXXQRYGVRKLELLIAILVFVMAGCYFGEMSYVKPPASDLLKGMFIPKLSGHGA 360
QRYG RKLELLIAILVFVMA C+FGEMSYVKPPAS +LKGMF+PKL G GA
Sbjct: 172 LSTLLLLGLQRYGARKLELLIAILVFVMAACFFGEMSYVKPPASGVLKGMFVPKLKGEGA 231
Query: 361 TGDAIALLGALVMPHNLFLHSALVLSRKIPSSVQGINSACKYFLIESGFALFVA*MLR** 540
T DAIALLGALVMPHNLFLHSALVLSRK+P+SV+GIN AC+YFLIESG ALF+A ++
Sbjct: 232 TADAIALLGALVMPHNLFLHSALVLSRKVPNSVRGINDACRYFLIESGIALFIAFLINVA 291
Query: 541 QXXXXXXXXXXX----------AKMTPKDAVILLKNVLGKSSSTFYAIALLASGQSSTIT 690
+ +T A LL+NVLGKSSST YAIAL ASGQSS+IT
Sbjct: 292 VVSVSGTVCTVGNVTQTTADQCSDITLNSASFLLQNVLGKSSSTIYAIALFASGQSSSIT 351
Query: 691 GTYAGQYIMQGFLDLKMKTWMRNLMTRCIAITPXXXXXXXXXXXXXXXXXXXXXMILSFE 870
GTYAGQ+IMQGFLDLKMKTW RNLMTR IAITP MILSFE
Sbjct: 352 GTYAGQFIMQGFLDLKMKTWARNLMTRSIAITPSLIVSIIGGPQGAGRLIIIASMILSFE 411
Query: 871 LPFALIPLLKFSSGATKMGPHKNSIYVIVISWILGFLIIGTNIYYLSTSYIDWLIHNNLP 1050
LPFALIPLLKFSS +TKMGPHKNSIY+IVISWILG IIG NIYYLST+++DWLIHNNLP
Sbjct: 412 LPFALIPLLKFSSSSTKMGPHKNSIYIIVISWILGLAIIGINIYYLSTAFVDWLIHNNLP 471
Query: 1051 KVANVFIGIIVFPVMSIYILSVIYLTVRKDKIVTYIDPSKLDPNAQNKMENGLDSADG-- 1224
KVANVFIGI VFP+M+ YI +VIYL RKD++VTYI+P K D AQ +E+GL+++ G
Sbjct: 472 KVANVFIGIAVFPLMAAYIGAVIYLMFRKDRVVTYIEPEKDDAVAQAHLESGLNNSFGPR 531
Query: 1225 -VDHVPYRDDLADIPLP 1272
V +P+R+DLA IPLP
Sbjct: 532 DVTPLPFREDLAHIPLP 548
>dbj|BAM34952.1| metal transporter Nramp1 [Solanum torvum]
Length = 534
Score = 568 bits (1464), Expect = e-159
Identities = 298/435 (68%), Positives = 333/435 (76%), Gaps = 10/435 (2%)
Frame = +1
Query: 1 TGKHLAELCKAEYPILVKYCLWLLAEVAVIAADIPEVIGTAFALNILFHIPVWAGVXXXX 180
TGKHL+ELC AEYP+ VKYCLWLLAEVAVIAADIPEVIGTAFALNILFHIPVW GV
Sbjct: 105 TGKHLSELCSAEYPVFVKYCLWLLAEVAVIAADIPEVIGTAFALNILFHIPVWVGVLCTG 164
Query: 181 XXXXXXXXXQRYGVRKLELLIAILVFVMAGCYFGEMSYVKPPASDLLKGMFIPKLSGHGA 360
QRYGVRKLELLIAILVFVMA C+FGEMSYVKPPA +L KGMFIPKL G GA
Sbjct: 165 VSTLLFIGLQRYGVRKLELLIAILVFVMAACFFGEMSYVKPPAKELFKGMFIPKLKGDGA 224
Query: 361 TGDAIALLGALVMPHNLFLHSALVLSRKIPSSVQGINSACKYFLIESGFALFVA*MLR** 540
T DAIALLGALVMPHNLFLHSALVLSRKIP+S++GIN AC++FLIESGFALFV+ ++
Sbjct: 225 TADAIALLGALVMPHNLFLHSALVLSRKIPNSIRGINDACRFFLIESGFALFVSFLINVA 284
Query: 541 ----------QXXXXXXXXXXXAKMTPKDAVILLKNVLGKSSSTFYAIALLASGQSSTIT 690
+T A LLKNVLGKSSST YAIALLASGQSSTIT
Sbjct: 285 VVSVSGTVCGADNLSEQNKESCNDITLNSASFLLKNVLGKSSSTVYAIALLASGQSSTIT 344
Query: 691 GTYAGQYIMQGFLDLKMKTWMRNLMTRCIAITPXXXXXXXXXXXXXXXXXXXXXMILSFE 870
GTYAGQ+IMQGFLDLKMKTW+RNL TR IAITP MILSFE
Sbjct: 345 GTYAGQFIMQGFLDLKMKTWLRNLFTRLIAITPSLVVSIIGGPSGAGRLIIIASMILSFE 404
Query: 871 LPFALIPLLKFSSGATKMGPHKNSIYVIVISWILGFLIIGTNIYYLSTSYIDWLIHNNLP 1050
LPFALIPLLKFSS +TK+GPHKNSIY+IVISWILG IIG NIYYLST+++ WL++N+LP
Sbjct: 405 LPFALIPLLKFSSSSTKLGPHKNSIYIIVISWILGLGIIGINIYYLSTAFVGWLLNNHLP 464
Query: 1051 KVANVFIGIIVFPVMSIYILSVIYLTVRKDKIVTYIDPSKLDPNAQNKMENGLDSADGVD 1230
KV NV IGI+VFP+M+IYIL+VIYL RKD++VTYI+P K D MENG +S + VD
Sbjct: 465 KVGNVLIGIVVFPLMAIYILAVIYLMFRKDRVVTYINPIKDD-----HMENGTNSMELVD 519
Query: 1231 HVPYRDDLADIPLPR 1275
VPYR+DL DIPLP+
Sbjct: 520 RVPYREDLVDIPLPQ 534