BLASTX nr result

ID: Coptis25_contig00004791 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00004791
         (705 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285526.1| PREDICTED: transmembrane 9 superfamily membe...   167   1e-39
ref|XP_002324334.1| predicted protein [Populus trichocarpa] gi|2...   167   2e-39
ref|XP_002515423.1| Endosomal P24A protein precursor, putative [...   165   7e-39
ref|XP_004145497.1| PREDICTED: transmembrane 9 superfamily membe...   165   1e-38
ref|XP_002308707.1| predicted protein [Populus trichocarpa] gi|1...   165   1e-38

>ref|XP_002285526.1| PREDICTED: transmembrane 9 superfamily member 4 isoform 1 [Vitis
           vinifera] gi|296082138|emb|CBI21143.3| unnamed protein
           product [Vitis vinifera]
          Length = 638

 Score =  167 bits (424), Expect = 1e-39
 Identities = 80/96 (83%), Positives = 81/96 (84%)
 Frame = +1

Query: 1   TCAEITIVLCYFQLCSEDYLWWWRSYLTSGSSXXXXXXXXXXXXXXKLEITKFVSGALYF 180
           TCAEITIVLCYFQLCSEDYLWWWR+YLTSGSS              KLEITK VSGALYF
Sbjct: 543 TCAEITIVLCYFQLCSEDYLWWWRAYLTSGSSALYLFLYATFYFFTKLEITKLVSGALYF 602

Query: 181 GYMLIVSYAFFVLTGTIGFYACFWFTRLIYSSVKID 288
           GYMLIVSYAFFVLTGTIGFYACFWFTRLIYSSVKID
Sbjct: 603 GYMLIVSYAFFVLTGTIGFYACFWFTRLIYSSVKID 638


>ref|XP_002324334.1| predicted protein [Populus trichocarpa] gi|222865768|gb|EEF02899.1|
           predicted protein [Populus trichocarpa]
          Length = 639

 Score =  167 bits (423), Expect = 2e-39
 Identities = 80/96 (83%), Positives = 80/96 (83%)
 Frame = +1

Query: 1   TCAEITIVLCYFQLCSEDYLWWWRSYLTSGSSXXXXXXXXXXXXXXKLEITKFVSGALYF 180
           TCAEITIVLCYFQLCSEDYLWWWRSYLTSGSS              KLEITK VSGALYF
Sbjct: 544 TCAEITIVLCYFQLCSEDYLWWWRSYLTSGSSALYLFLYATFYFFTKLEITKLVSGALYF 603

Query: 181 GYMLIVSYAFFVLTGTIGFYACFWFTRLIYSSVKID 288
           GYMLI SYAFFVLTGTIGFYACFWFTRLIYSSVKID
Sbjct: 604 GYMLIASYAFFVLTGTIGFYACFWFTRLIYSSVKID 639


>ref|XP_002515423.1| Endosomal P24A protein precursor, putative [Ricinus communis]
           gi|223545367|gb|EEF46872.1| Endosomal P24A protein
           precursor, putative [Ricinus communis]
          Length = 645

 Score =  165 bits (418), Expect = 7e-39
 Identities = 78/96 (81%), Positives = 79/96 (82%)
 Frame = +1

Query: 1   TCAEITIVLCYFQLCSEDYLWWWRSYLTSGSSXXXXXXXXXXXXXXKLEITKFVSGALYF 180
           TCAEIT+VLCYFQLCSEDYLWWWRSYLTSGSS              KLEITK VSG LYF
Sbjct: 550 TCAEITVVLCYFQLCSEDYLWWWRSYLTSGSSALYLFLYATFYFFTKLEITKLVSGVLYF 609

Query: 181 GYMLIVSYAFFVLTGTIGFYACFWFTRLIYSSVKID 288
           GYMLI SYAFFVLTGTIGFYACFWFTRLIYSSVKID
Sbjct: 610 GYMLIASYAFFVLTGTIGFYACFWFTRLIYSSVKID 645


>ref|XP_004145497.1| PREDICTED: transmembrane 9 superfamily member 4-like [Cucumis
           sativus] gi|449485197|ref|XP_004157096.1| PREDICTED:
           transmembrane 9 superfamily member 4-like [Cucumis
           sativus]
          Length = 642

 Score =  165 bits (417), Expect = 1e-38
 Identities = 79/96 (82%), Positives = 79/96 (82%)
 Frame = +1

Query: 1   TCAEITIVLCYFQLCSEDYLWWWRSYLTSGSSXXXXXXXXXXXXXXKLEITKFVSGALYF 180
           TCAEITIVLCYFQLCSEDYLWWWRSYLTSGSS              KLEITK VSG LYF
Sbjct: 547 TCAEITIVLCYFQLCSEDYLWWWRSYLTSGSSALYLFLYSTFYFFTKLEITKLVSGVLYF 606

Query: 181 GYMLIVSYAFFVLTGTIGFYACFWFTRLIYSSVKID 288
           GYM IVSYAFFVLTGTIGFYACFWFTRLIYSSVKID
Sbjct: 607 GYMSIVSYAFFVLTGTIGFYACFWFTRLIYSSVKID 642


>ref|XP_002308707.1| predicted protein [Populus trichocarpa] gi|118485813|gb|ABK94754.1|
           unknown [Populus trichocarpa]
           gi|222854683|gb|EEE92230.1| predicted protein [Populus
           trichocarpa]
          Length = 642

 Score =  165 bits (417), Expect = 1e-38
 Identities = 79/96 (82%), Positives = 79/96 (82%)
 Frame = +1

Query: 1   TCAEITIVLCYFQLCSEDYLWWWRSYLTSGSSXXXXXXXXXXXXXXKLEITKFVSGALYF 180
           TCAEITIVLCYFQLCSEDYLWWWRSYLTSGSS              KLEITK VSGALYF
Sbjct: 547 TCAEITIVLCYFQLCSEDYLWWWRSYLTSGSSALYLFLYATFYFFTKLEITKLVSGALYF 606

Query: 181 GYMLIVSYAFFVLTGTIGFYACFWFTRLIYSSVKID 288
           GYMLI SYAFFVLTGTIGFYAC WFTRLIYSSVKID
Sbjct: 607 GYMLIASYAFFVLTGTIGFYACLWFTRLIYSSVKID 642


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