BLASTX nr result
ID: Coptis25_contig00004768
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00004768
(1516 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002264387.1| PREDICTED: protein farnesyltransferase/geran... 484 e-134
ref|XP_002534116.1| protein farnesyltransferase alpha subunit, p... 484 e-134
ref|NP_001240249.1| uncharacterized protein LOC100790130 [Glycin... 477 e-132
gb|ACU24085.1| unknown [Glycine max] 473 e-131
ref|XP_002310440.1| predicted protein [Populus trichocarpa] gi|2... 468 e-129
>ref|XP_002264387.1| PREDICTED: protein farnesyltransferase/geranylgeranyltransferase
type-1 subunit alpha [Vitis vinifera]
gi|297743768|emb|CBI36651.3| unnamed protein product
[Vitis vinifera]
Length = 331
Score = 484 bits (1246), Expect = e-134
Identities = 221/316 (69%), Positives = 262/316 (82%)
Frame = -1
Query: 1096 PLSQRAEWSDVNPVPQNDGPNPVVPIAYRDDFRETMDYFRAVYLADERSFRSLELTTEAI 917
PLSQR EWSDV PVPQ+DGPNPVVPIAY+DDF ETMDYFRAVY ADERS RSL +T EAI
Sbjct: 11 PLSQRPEWSDVTPVPQDDGPNPVVPIAYKDDFTETMDYFRAVYFADERSLRSLHVTAEAI 70
Query: 916 HFNAGNYTVWHFRRLVLETLGVDLHDELSFVESIAKVNSKNYQIWHHRRWVAEKLGTEVT 737
H NAGNYTVWHFRRL+L L DLH+EL+F++ +A N KNYQIWHHRRWVAEKLG++ T
Sbjct: 71 HMNAGNYTVWHFRRLILGALNADLHEELNFIKKVANGNPKNYQIWHHRRWVAEKLGSDAT 130
Query: 736 GQELEFTKNILSLDAKNYHAWSHRQWVLQALGGWEGELDYCHKLLEEDVFNNSAWNQRHF 557
+EL+FTK ILSLDAKNYHAWSHRQWVLQ LGGWE ELDYC +LLE+D+FNNSAWNQR+F
Sbjct: 131 SKELDFTKKILSLDAKNYHAWSHRQWVLQELGGWEDELDYCKQLLEDDIFNNSAWNQRYF 190
Query: 556 VVTRSPLLGGPEAMRDSEVKYTIEAILSNPENESPWRYLRGLYKGDTLSFTHDPEISSML 377
V+T+SP LGG EAMR+SEV YT+ AI++ PENESPWRYLRGLYK D S+ +DP++SS+
Sbjct: 191 VITKSPFLGGLEAMRESEVNYTVGAIIAKPENESPWRYLRGLYKDDAQSWVNDPQVSSVC 250
Query: 376 LKVLKNKSNYVFALSLLLDLVCLGFEPSEEIIHAVEPLRTSHPDPPDVNVARTICSVLET 197
L VL K N VFALS LLDL+C GF+PS++ I+AV+ L+T D D N+A +CSVL
Sbjct: 251 LTVLSAKRNTVFALSTLLDLLCHGFQPSQDFINAVDALKTPDLDQSDSNLATAVCSVLGH 310
Query: 196 VDPMRSNYWTWRRSNI 149
+DPMR NYW WR++ +
Sbjct: 311 MDPMRVNYWAWRKNKL 326
>ref|XP_002534116.1| protein farnesyltransferase alpha subunit, putative [Ricinus
communis] gi|223525828|gb|EEF28267.1| protein
farnesyltransferase alpha subunit, putative [Ricinus
communis]
Length = 333
Score = 484 bits (1245), Expect = e-134
Identities = 218/317 (68%), Positives = 275/317 (86%)
Frame = -1
Query: 1099 IPLSQRAEWSDVNPVPQNDGPNPVVPIAYRDDFRETMDYFRAVYLADERSFRSLELTTEA 920
+PLSQR EWSDV PV Q+DGPNPVVPIAY+ +F ETM+YFRA+YL+DERS R+L+LT
Sbjct: 13 VPLSQRPEWSDVIPVQQDDGPNPVVPIAYKPEFEETMNYFRAIYLSDERSPRALQLTHLV 72
Query: 919 IHFNAGNYTVWHFRRLVLETLGVDLHDELSFVESIAKVNSKNYQIWHHRRWVAEKLGTEV 740
I N GNYTVWHFRRLVLE L +L++EL ++E +AK N+KNYQIWHHRRWVAEKLGT+
Sbjct: 73 ILLNPGNYTVWHFRRLVLEALNAELYEELDYIERVAKKNTKNYQIWHHRRWVAEKLGTDA 132
Query: 739 TGQELEFTKNILSLDAKNYHAWSHRQWVLQALGGWEGELDYCHKLLEEDVFNNSAWNQRH 560
+EL+FT+ ILSLDAKNYHAWSHRQWVLQALGGWE ELDYC +LLE DVFNNSAWNQR+
Sbjct: 133 AAKELQFTRKILSLDAKNYHAWSHRQWVLQALGGWEDELDYCRQLLEHDVFNNSAWNQRY 192
Query: 559 FVVTRSPLLGGPEAMRDSEVKYTIEAILSNPENESPWRYLRGLYKGDTLSFTHDPEISSM 380
F++TRSPLLGG +A+R+SE+K+T+EAIL+NPENESPWRYLRGLY+GDT S+ +DP++SS+
Sbjct: 193 FIITRSPLLGGLKAVRESEMKFTVEAILANPENESPWRYLRGLYQGDTQSWINDPQVSSV 252
Query: 379 LLKVLKNKSNYVFALSLLLDLVCLGFEPSEEIIHAVEPLRTSHPDPPDVNVARTICSVLE 200
LKVL K+N++FALS+LLDL+C GF+ ++EI +V+ LRTS+ DPP+ ++A+ +CS+LE
Sbjct: 253 CLKVLSAKTNHIFALSMLLDLLCHGFQANQEIRDSVDALRTSNCDPPEPDLAKAVCSLLE 312
Query: 199 TVDPMRSNYWTWRRSNI 149
VDPMR+NYW WR+S +
Sbjct: 313 HVDPMRANYWIWRKSKL 329
>ref|NP_001240249.1| uncharacterized protein LOC100790130 [Glycine max]
gi|255641545|gb|ACU21046.1| unknown [Glycine max]
Length = 346
Score = 477 bits (1227), Expect = e-132
Identities = 219/329 (66%), Positives = 269/329 (81%), Gaps = 11/329 (3%)
Frame = -1
Query: 1102 RIPLSQRAEWSDVNPVPQNDGPNPVVPIAYRDDFRETMDYFRAVYLADERSFRSLELTTE 923
R+PL +R EWSDV PVPQNDGPNPVVPI Y ++F E MDYFRAVYL DERS R+L LT E
Sbjct: 14 RVPLRERVEWSDVTPVPQNDGPNPVVPIQYTEEFSEVMDYFRAVYLTDERSPRALALTAE 73
Query: 922 AIHFNAGNYTVWHFRRLVLETLGVDLHDELSFVESIAKVNSKNYQIWHHRRWVAEKLGTE 743
A+ FN+GNYTVWHFRRL+LE+L VDL+DEL FVE +A NSKNYQ+WHHRRWVAEKLG E
Sbjct: 74 AVQFNSGNYTVWHFRRLLLESLKVDLNDELEFVERMAAGNSKNYQMWHHRRWVAEKLGPE 133
Query: 742 VTGQELEFTKNILSLDAKNYHAWSHRQWVLQALGGWEGELDYCHKLLEEDVFNNSAWNQR 563
ELEFTK ILS+DAK+YHAWSHRQW LQ LGGWE EL+YC +LL+ED+FNNSAWNQR
Sbjct: 134 ARNNELEFTKKILSVDAKHYHAWSHRQWALQTLGGWEDELNYCTELLKEDIFNNSAWNQR 193
Query: 562 HFVVTRSPLLGGPEAMRDSEVKYTIEAILSNPENESPWRYLRGLYKGDTLSFTHDPEISS 383
+FV+TRSP LGG +AMR+SEV YTIEAI++ PENES WRYLRGLYKG+T S+ +DP++SS
Sbjct: 194 YFVITRSPFLGGLKAMRESEVLYTIEAIIAYPENESSWRYLRGLYKGETTSWVNDPQVSS 253
Query: 382 MLLKVLKNKSNYVFALSLLLDLVCLGFEPSEEIIHAVEPLRTSHPDPPD----------- 236
+ LK+L+ KSNYVFALS +LDL+C G++P+E+I A++ L+T+ D D
Sbjct: 254 VCLKILRTKSNYVFALSTILDLICFGYQPNEDIRDAIDALKTADMDKQDLDDDEKGEQQN 313
Query: 235 VNVARTICSVLETVDPMRSNYWTWRRSNI 149
+N+AR ICS+L+ VDP+R+NYW WR+S +
Sbjct: 314 LNIARNICSILKQVDPIRTNYWIWRKSRL 342
>gb|ACU24085.1| unknown [Glycine max]
Length = 340
Score = 473 bits (1217), Expect = e-131
Identities = 219/329 (66%), Positives = 270/329 (82%), Gaps = 11/329 (3%)
Frame = -1
Query: 1102 RIPLSQRAEWSDVNPVPQNDGPNPVVPIAYRDDFRETMDYFRAVYLADERSFRSLELTTE 923
R+PL +RAEWSDV P+PQNDGPNPVVPI Y +DF + MDYFRAVYLADERS R+L LT E
Sbjct: 8 RVPLRERAEWSDVTPLPQNDGPNPVVPIQYTEDFSQVMDYFRAVYLADERSPRALALTAE 67
Query: 922 AIHFNAGNYTVWHFRRLVLETLGVDLHDELSFVESIAKVNSKNYQIWHHRRWVAEKLGTE 743
A+ FN+GNYTVWHFRRL+LE+L VDL+ EL FVE +A NSKNYQ+WHHRRWVAEKLG E
Sbjct: 68 AVQFNSGNYTVWHFRRLLLESLKVDLNAELDFVERMAAGNSKNYQMWHHRRWVAEKLGPE 127
Query: 742 VTGQELEFTKNILSLDAKNYHAWSHRQWVLQALGGWEGELDYCHKLLEEDVFNNSAWNQR 563
ELEFTK ILS+DAK+YHAWSHRQWVLQALGGWE EL+YC +LL+ED+FNNSAWNQR
Sbjct: 128 ARKNELEFTKKILSVDAKHYHAWSHRQWVLQALGGWEDELNYCTELLKEDIFNNSAWNQR 187
Query: 562 HFVVTRSPLLGGPEAMRDSEVKYTIEAILSNPENESPWRYLRGLYKGDTLSFTHDPEISS 383
+FV+TRSP LGG +AMR+SEV YTIEAI++ PENES WRYLRGLYKG+T S+ +DP++SS
Sbjct: 188 YFVITRSPFLGGLKAMRESEVLYTIEAIIAYPENESSWRYLRGLYKGETTSWVNDPQVSS 247
Query: 382 MLLKVLKNKSNYVFALSLLLDLVCLGFEPSEEIIHAVEPLRTSHPD-----------PPD 236
+ LK+L+ KSNYVFALS +LDL+C G+ P+E+ A++ L+T+ D +
Sbjct: 248 VCLKILRTKSNYVFALSTILDLICFGYLPNEDFRDAIDALKTADMDKQNLDDNEKGEQQN 307
Query: 235 VNVARTICSVLETVDPMRSNYWTWRRSNI 149
+N+A+ ICS+LE VDP+R+NYW WR+S +
Sbjct: 308 LNIAQNICSILEQVDPIRTNYWIWRKSRL 336
>ref|XP_002310440.1| predicted protein [Populus trichocarpa] gi|222853343|gb|EEE90890.1|
predicted protein [Populus trichocarpa]
Length = 330
Score = 468 bits (1203), Expect = e-129
Identities = 217/320 (67%), Positives = 264/320 (82%)
Frame = -1
Query: 1102 RIPLSQRAEWSDVNPVPQNDGPNPVVPIAYRDDFRETMDYFRAVYLADERSFRSLELTTE 923
++ LSQ EW+DV P+PQ+DGPNPVVPI Y+ DF ETM YFRAVY A+E S R+L+LT +
Sbjct: 7 KLRLSQDPEWADVTPIPQDDGPNPVVPIDYKPDFIETMGYFRAVYKANEFSPRALQLTHQ 66
Query: 922 AIHFNAGNYTVWHFRRLVLETLGVDLHDELSFVESIAKVNSKNYQIWHHRRWVAEKLGTE 743
AI N GNYTVWHFRRL+L+ LG+DL++EL+F+ I++ N KNYQIWHHRRW+AEKLGT+
Sbjct: 67 AILLNPGNYTVWHFRRLILDALGIDLNEELNFMSGISESNPKNYQIWHHRRWIAEKLGTD 126
Query: 742 VTGQELEFTKNILSLDAKNYHAWSHRQWVLQALGGWEGELDYCHKLLEEDVFNNSAWNQR 563
+ELEFT+ +LSLDAKNYHAWSHRQWVLQALGGWE ELDYCH+LLE+DVFNNSAWNQR
Sbjct: 127 AASKELEFTRRMLSLDAKNYHAWSHRQWVLQALGGWENELDYCHQLLEKDVFNNSAWNQR 186
Query: 562 HFVVTRSPLLGGPEAMRDSEVKYTIEAILSNPENESPWRYLRGLYKGDTLSFTHDPEISS 383
+FVVTRSP LGG EA R+SEVKYTIE IL NP NESPWRYLRGLYK D S+ DP++SS
Sbjct: 187 YFVVTRSPFLGGLEATRESEVKYTIETILGNPGNESPWRYLRGLYKNDPKSWISDPQVSS 246
Query: 382 MLLKVLKNKSNYVFALSLLLDLVCLGFEPSEEIIHAVEPLRTSHPDPPDVNVARTICSVL 203
+ LKVL ++N+VFALS LLDL+ GF+ ++E AV+ LR S+ DP D ++A+TICS+L
Sbjct: 247 VCLKVLSAEANHVFALSTLLDLLSHGFQANQEFRDAVDSLRPSNSDPADSDIAKTICSIL 306
Query: 202 ETVDPMRSNYWTWRRSNIAS 143
VDPMR NYWTWR+S + S
Sbjct: 307 RHVDPMRVNYWTWRKSKLPS 326