BLASTX nr result

ID: Coptis25_contig00004765 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00004765
         (274 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272169.1| PREDICTED: ras-related protein Rab5 [Vitis v...    66   3e-09
gb|AFK45912.1| unknown [Medicago truncatula]                           64   1e-08
gb|AFK33679.1| unknown [Lotus japonicus]                               64   1e-08
ref|XP_003600625.1| GTP binding protein [Medicago truncatula] gi...    64   1e-08
ref|XP_003553043.1| PREDICTED: ras-related protein RHN1-like [Gl...    63   2e-08

>ref|XP_002272169.1| PREDICTED: ras-related protein Rab5 [Vitis vinifera]
           gi|147795279|emb|CAN67253.1| hypothetical protein
           VITISV_014431 [Vitis vinifera]
          Length = 200

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 30/35 (85%), Positives = 33/35 (94%)
 Frame = -1

Query: 274 EIARRLPRAQPSQNPAGMVLVDRPADRSQAAKCCS 170
           EIA+RLPRAQP+QNPAGMVLVDRPA+ SQAA CCS
Sbjct: 166 EIAKRLPRAQPAQNPAGMVLVDRPAESSQAASCCS 200


>gb|AFK45912.1| unknown [Medicago truncatula]
          Length = 200

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 29/35 (82%), Positives = 33/35 (94%)
 Frame = -1

Query: 274 EIARRLPRAQPSQNPAGMVLVDRPADRSQAAKCCS 170
           EIA+RLPRAQP+QNPAGMVLVDRPA+ S+AA CCS
Sbjct: 166 EIAKRLPRAQPAQNPAGMVLVDRPAEGSRAASCCS 200


>gb|AFK33679.1| unknown [Lotus japonicus]
          Length = 200

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 29/35 (82%), Positives = 33/35 (94%)
 Frame = -1

Query: 274 EIARRLPRAQPSQNPAGMVLVDRPADRSQAAKCCS 170
           EIA+RLPRAQP+QNPAGMVLVDRPA+ S+AA CCS
Sbjct: 166 EIAKRLPRAQPAQNPAGMVLVDRPAEGSRAASCCS 200


>ref|XP_003600625.1| GTP binding protein [Medicago truncatula]
           gi|355489673|gb|AES70876.1| GTP binding protein
           [Medicago truncatula]
          Length = 200

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 29/35 (82%), Positives = 33/35 (94%)
 Frame = -1

Query: 274 EIARRLPRAQPSQNPAGMVLVDRPADRSQAAKCCS 170
           EIA+RLPRAQP+QNPAGMVLVDRPA+ S+AA CCS
Sbjct: 166 EIAKRLPRAQPAQNPAGMVLVDRPAEGSRAASCCS 200


>ref|XP_003553043.1| PREDICTED: ras-related protein RHN1-like [Glycine max]
          Length = 200

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 28/35 (80%), Positives = 33/35 (94%)
 Frame = -1

Query: 274 EIARRLPRAQPSQNPAGMVLVDRPADRSQAAKCCS 170
           EIA+RLPRAQP+QNPAGMVLVDRPA+ ++AA CCS
Sbjct: 166 EIAKRLPRAQPAQNPAGMVLVDRPAEGTRAASCCS 200


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