BLASTX nr result

ID: Coptis25_contig00004763 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00004763
         (430 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAF43237.1|AC012654_21 Contains similarity to the vegetative ...   160   1e-37
ref|XP_004162166.1| PREDICTED: vegetative incompatibility protei...   151   5e-35
ref|XP_004138371.1| PREDICTED: vegetative incompatibility protei...   151   5e-35
ref|XP_002274841.1| PREDICTED: angio-associated migratory cell p...   151   6e-35
emb|CBI27914.3| unnamed protein product [Vitis vinifera]              150   8e-35

>gb|AAF43237.1|AC012654_21 Contains similarity to the vegetative incompatibility protein
           HET-E-1 from Podospora ansering gi|3023956; It contains
           5 WD40 domains PF|00400 [Arabidopsis thaliana]
          Length = 370

 Score =  160 bits (405), Expect = 1e-37
 Identities = 77/142 (54%), Positives = 103/142 (72%)
 Frame = -2

Query: 429 RGNLVLASSEDSTVSLWNADKATHLNIFFGHEGSVTCGDFTPDGYPYHTEAITCLTISYD 250
           RG++VLA SED ++ +WNADK  +LN+F GH  +VTCGDFTPDG+PYHTE +TCL I+ +
Sbjct: 157 RGHIVLAGSEDCSLWMWNADKEAYLNMFSGHNLNVTCGDFTPDGHPYHTEGLTCLDINSN 216

Query: 249 SNLAITRSEDSSVHMVHIATGKVISSLLTHSGSVMCVGLSPRYWQSVAVPGIPFSVPLLA 70
           S+LAI+ S+D SVH+V+I TGKV+SSL +H+ SV CV  SP             ++PL A
Sbjct: 217 SSLAISGSKDGSVHIVNIVTGKVVSSLNSHTDSVECVKFSPS----------SATIPLAA 266

Query: 69  TGSLDENLIIWDMQNFVARFTC 4
           TG +D+ LIIWD+Q+   RF C
Sbjct: 267 TGGMDKKLIIWDLQHSTPRFIC 288


>ref|XP_004162166.1| PREDICTED: vegetative incompatibility protein HET-E-1-like [Cucumis
           sativus]
          Length = 392

 Score =  151 bits (382), Expect = 5e-35
 Identities = 80/170 (47%), Positives = 102/170 (60%), Gaps = 28/170 (16%)
 Frame = -2

Query: 429 RGNLVLASSEDSTVSLWNADKATHLNIFFGHEGSVTCGDFTPDG---------------- 298
           RG+LVLA SEDST  +WNAD+  +LNIF GH  SVTCGDFTPDG                
Sbjct: 158 RGHLVLAGSEDSTAWMWNADRGIYLNIFSGHGASVTCGDFTPDGKIICTGSDDATMRIWN 217

Query: 297 ------------YPYHTEAITCLTISYDSNLAITRSEDSSVHMVHIATGKVISSLLTHSG 154
                       +PYHTE +T L ++ DS LA+T S+D SVH+V+IATGKV++SL++HS 
Sbjct: 218 PRSGENIHVVRGHPYHTEGLTSLALTSDSTLALTGSKDGSVHIVNIATGKVVNSLVSHSD 277

Query: 153 SVMCVGLSPRYWQSVAVPGIPFSVPLLATGSLDENLIIWDMQNFVARFTC 4
           S+ C+GL+P             S P  ATG +D+ LIIWD+Q    R TC
Sbjct: 278 SIECIGLAP-------------SSPWAATGGMDQKLIIWDLQQSTPRSTC 314


>ref|XP_004138371.1| PREDICTED: vegetative incompatibility protein HET-E-1-like [Cucumis
           sativus]
          Length = 392

 Score =  151 bits (382), Expect = 5e-35
 Identities = 80/170 (47%), Positives = 102/170 (60%), Gaps = 28/170 (16%)
 Frame = -2

Query: 429 RGNLVLASSEDSTVSLWNADKATHLNIFFGHEGSVTCGDFTPDG---------------- 298
           RG+LVLA SEDST  +WNAD+  +LNIF GH  SVTCGDFTPDG                
Sbjct: 158 RGHLVLAGSEDSTAWMWNADRGIYLNIFSGHGASVTCGDFTPDGKIICTGSDDATMRIWN 217

Query: 297 ------------YPYHTEAITCLTISYDSNLAITRSEDSSVHMVHIATGKVISSLLTHSG 154
                       +PYHTE +T L ++ DS LA+T S+D SVH+V+IATGKV++SL++HS 
Sbjct: 218 PRSGENIHVVRGHPYHTEGLTSLALTSDSTLALTGSKDGSVHIVNIATGKVVNSLVSHSD 277

Query: 153 SVMCVGLSPRYWQSVAVPGIPFSVPLLATGSLDENLIIWDMQNFVARFTC 4
           S+ C+GL+P             S P  ATG +D+ LIIWD+Q    R TC
Sbjct: 278 SIECIGLAP-------------SSPWAATGGMDQKLIIWDLQQSTPRSTC 314


>ref|XP_002274841.1| PREDICTED: angio-associated migratory cell protein [Vitis vinifera]
           gi|296088039|emb|CBI35322.3| unnamed protein product
           [Vitis vinifera]
          Length = 391

 Score =  151 bits (381), Expect = 6e-35
 Identities = 79/170 (46%), Positives = 103/170 (60%), Gaps = 28/170 (16%)
 Frame = -2

Query: 429 RGNLVLASSEDSTVSLWNADKATHLNIFFGHEGSVTCGDFTPDG---------------- 298
           RG+LVLA SED TV +WNAD++ +LN+F GH  SVTCG+FTPDG                
Sbjct: 157 RGHLVLAGSEDCTVWMWNADRSAYLNMFSGHASSVTCGNFTPDGKTICTGSDDATLRIWN 216

Query: 297 ------------YPYHTEAITCLTISYDSNLAITRSEDSSVHMVHIATGKVISSLLTHSG 154
                       +PYHTE +TCL I+ DS LA+T S+DSSVH+V+IATGKV+SSL +H+ 
Sbjct: 217 PRSGENTHVVRGHPYHTEGLTCLAITSDSTLALTGSKDSSVHIVNIATGKVVSSLTSHTD 276

Query: 153 SVMCVGLSPRYWQSVAVPGIPFSVPLLATGSLDENLIIWDMQNFVARFTC 4
           S+ C+GLS              S P  ATG +D  L++WD+Q+   R TC
Sbjct: 277 SIECIGLS-------------LSSPWAATGGMDNKLVVWDLQHSSPRCTC 313


>emb|CBI27914.3| unnamed protein product [Vitis vinifera]
          Length = 393

 Score =  150 bits (380), Expect = 8e-35
 Identities = 80/170 (47%), Positives = 101/170 (59%), Gaps = 28/170 (16%)
 Frame = -2

Query: 429 RGNLVLASSEDSTVSLWNADKATHLNIFFGHEGSVTCGDFTPDG---------------- 298
           RG++VLA SED TV +WNAD+  +LN+F GH  SVTCGDFTPDG                
Sbjct: 159 RGHVVLAGSEDCTVWMWNADRGAYLNMFSGHASSVTCGDFTPDGKTICTGSDDATLRIWN 218

Query: 297 ------------YPYHTEAITCLTISYDSNLAITRSEDSSVHMVHIATGKVISSLLTHSG 154
                       +PYHTE +TCL I+ DS LA+T S+DSSVH+V+I TGKV+SSL +H+ 
Sbjct: 219 PSSGENIHVVRGHPYHTEGLTCLAITSDSTLALTGSKDSSVHVVNITTGKVVSSLTSHTD 278

Query: 153 SVMCVGLSPRYWQSVAVPGIPFSVPLLATGSLDENLIIWDMQNFVARFTC 4
           S+ C+GLS              S P  ATGS+D  LI WD+Q+   R TC
Sbjct: 279 SIECIGLS-------------LSPPWAATGSMDNKLIFWDLQHSSPRCTC 315


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