BLASTX nr result
ID: Coptis25_contig00004763
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00004763 (430 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AAF43237.1|AC012654_21 Contains similarity to the vegetative ... 160 1e-37 ref|XP_004162166.1| PREDICTED: vegetative incompatibility protei... 151 5e-35 ref|XP_004138371.1| PREDICTED: vegetative incompatibility protei... 151 5e-35 ref|XP_002274841.1| PREDICTED: angio-associated migratory cell p... 151 6e-35 emb|CBI27914.3| unnamed protein product [Vitis vinifera] 150 8e-35 >gb|AAF43237.1|AC012654_21 Contains similarity to the vegetative incompatibility protein HET-E-1 from Podospora ansering gi|3023956; It contains 5 WD40 domains PF|00400 [Arabidopsis thaliana] Length = 370 Score = 160 bits (405), Expect = 1e-37 Identities = 77/142 (54%), Positives = 103/142 (72%) Frame = -2 Query: 429 RGNLVLASSEDSTVSLWNADKATHLNIFFGHEGSVTCGDFTPDGYPYHTEAITCLTISYD 250 RG++VLA SED ++ +WNADK +LN+F GH +VTCGDFTPDG+PYHTE +TCL I+ + Sbjct: 157 RGHIVLAGSEDCSLWMWNADKEAYLNMFSGHNLNVTCGDFTPDGHPYHTEGLTCLDINSN 216 Query: 249 SNLAITRSEDSSVHMVHIATGKVISSLLTHSGSVMCVGLSPRYWQSVAVPGIPFSVPLLA 70 S+LAI+ S+D SVH+V+I TGKV+SSL +H+ SV CV SP ++PL A Sbjct: 217 SSLAISGSKDGSVHIVNIVTGKVVSSLNSHTDSVECVKFSPS----------SATIPLAA 266 Query: 69 TGSLDENLIIWDMQNFVARFTC 4 TG +D+ LIIWD+Q+ RF C Sbjct: 267 TGGMDKKLIIWDLQHSTPRFIC 288 >ref|XP_004162166.1| PREDICTED: vegetative incompatibility protein HET-E-1-like [Cucumis sativus] Length = 392 Score = 151 bits (382), Expect = 5e-35 Identities = 80/170 (47%), Positives = 102/170 (60%), Gaps = 28/170 (16%) Frame = -2 Query: 429 RGNLVLASSEDSTVSLWNADKATHLNIFFGHEGSVTCGDFTPDG---------------- 298 RG+LVLA SEDST +WNAD+ +LNIF GH SVTCGDFTPDG Sbjct: 158 RGHLVLAGSEDSTAWMWNADRGIYLNIFSGHGASVTCGDFTPDGKIICTGSDDATMRIWN 217 Query: 297 ------------YPYHTEAITCLTISYDSNLAITRSEDSSVHMVHIATGKVISSLLTHSG 154 +PYHTE +T L ++ DS LA+T S+D SVH+V+IATGKV++SL++HS Sbjct: 218 PRSGENIHVVRGHPYHTEGLTSLALTSDSTLALTGSKDGSVHIVNIATGKVVNSLVSHSD 277 Query: 153 SVMCVGLSPRYWQSVAVPGIPFSVPLLATGSLDENLIIWDMQNFVARFTC 4 S+ C+GL+P S P ATG +D+ LIIWD+Q R TC Sbjct: 278 SIECIGLAP-------------SSPWAATGGMDQKLIIWDLQQSTPRSTC 314 >ref|XP_004138371.1| PREDICTED: vegetative incompatibility protein HET-E-1-like [Cucumis sativus] Length = 392 Score = 151 bits (382), Expect = 5e-35 Identities = 80/170 (47%), Positives = 102/170 (60%), Gaps = 28/170 (16%) Frame = -2 Query: 429 RGNLVLASSEDSTVSLWNADKATHLNIFFGHEGSVTCGDFTPDG---------------- 298 RG+LVLA SEDST +WNAD+ +LNIF GH SVTCGDFTPDG Sbjct: 158 RGHLVLAGSEDSTAWMWNADRGIYLNIFSGHGASVTCGDFTPDGKIICTGSDDATMRIWN 217 Query: 297 ------------YPYHTEAITCLTISYDSNLAITRSEDSSVHMVHIATGKVISSLLTHSG 154 +PYHTE +T L ++ DS LA+T S+D SVH+V+IATGKV++SL++HS Sbjct: 218 PRSGENIHVVRGHPYHTEGLTSLALTSDSTLALTGSKDGSVHIVNIATGKVVNSLVSHSD 277 Query: 153 SVMCVGLSPRYWQSVAVPGIPFSVPLLATGSLDENLIIWDMQNFVARFTC 4 S+ C+GL+P S P ATG +D+ LIIWD+Q R TC Sbjct: 278 SIECIGLAP-------------SSPWAATGGMDQKLIIWDLQQSTPRSTC 314 >ref|XP_002274841.1| PREDICTED: angio-associated migratory cell protein [Vitis vinifera] gi|296088039|emb|CBI35322.3| unnamed protein product [Vitis vinifera] Length = 391 Score = 151 bits (381), Expect = 6e-35 Identities = 79/170 (46%), Positives = 103/170 (60%), Gaps = 28/170 (16%) Frame = -2 Query: 429 RGNLVLASSEDSTVSLWNADKATHLNIFFGHEGSVTCGDFTPDG---------------- 298 RG+LVLA SED TV +WNAD++ +LN+F GH SVTCG+FTPDG Sbjct: 157 RGHLVLAGSEDCTVWMWNADRSAYLNMFSGHASSVTCGNFTPDGKTICTGSDDATLRIWN 216 Query: 297 ------------YPYHTEAITCLTISYDSNLAITRSEDSSVHMVHIATGKVISSLLTHSG 154 +PYHTE +TCL I+ DS LA+T S+DSSVH+V+IATGKV+SSL +H+ Sbjct: 217 PRSGENTHVVRGHPYHTEGLTCLAITSDSTLALTGSKDSSVHIVNIATGKVVSSLTSHTD 276 Query: 153 SVMCVGLSPRYWQSVAVPGIPFSVPLLATGSLDENLIIWDMQNFVARFTC 4 S+ C+GLS S P ATG +D L++WD+Q+ R TC Sbjct: 277 SIECIGLS-------------LSSPWAATGGMDNKLVVWDLQHSSPRCTC 313 >emb|CBI27914.3| unnamed protein product [Vitis vinifera] Length = 393 Score = 150 bits (380), Expect = 8e-35 Identities = 80/170 (47%), Positives = 101/170 (59%), Gaps = 28/170 (16%) Frame = -2 Query: 429 RGNLVLASSEDSTVSLWNADKATHLNIFFGHEGSVTCGDFTPDG---------------- 298 RG++VLA SED TV +WNAD+ +LN+F GH SVTCGDFTPDG Sbjct: 159 RGHVVLAGSEDCTVWMWNADRGAYLNMFSGHASSVTCGDFTPDGKTICTGSDDATLRIWN 218 Query: 297 ------------YPYHTEAITCLTISYDSNLAITRSEDSSVHMVHIATGKVISSLLTHSG 154 +PYHTE +TCL I+ DS LA+T S+DSSVH+V+I TGKV+SSL +H+ Sbjct: 219 PSSGENIHVVRGHPYHTEGLTCLAITSDSTLALTGSKDSSVHVVNITTGKVVSSLTSHTD 278 Query: 153 SVMCVGLSPRYWQSVAVPGIPFSVPLLATGSLDENLIIWDMQNFVARFTC 4 S+ C+GLS S P ATGS+D LI WD+Q+ R TC Sbjct: 279 SIECIGLS-------------LSPPWAATGSMDNKLIFWDLQHSSPRCTC 315