BLASTX nr result

ID: Coptis25_contig00004725 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00004725
         (1748 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272923.1| PREDICTED: formimidoyltransferase-cyclodeami...   192   2e-46
gb|AFK44048.1| unknown [Lotus japonicus]                              191   4e-46
gb|ACU20037.1| unknown [Glycine max]                                  182   2e-43
ref|XP_004139960.1| PREDICTED: formimidoyltransferase-cyclodeami...   182   3e-43
ref|XP_002319920.1| predicted protein [Populus trichocarpa] gi|2...   181   5e-43

>ref|XP_002272923.1| PREDICTED: formimidoyltransferase-cyclodeaminase-like [Vitis
           vinifera]
          Length = 455

 Score =  192 bits (489), Expect = 2e-46
 Identities = 88/132 (66%), Positives = 115/132 (87%)
 Frame = +1

Query: 4   NMSDIFDSSLNLEDAHFEEGYKDGYKDGKISGKEEGKEVGLKHGFEVGEELGFYKGCINV 183
           ++ DIFDSSLNLE+ HF +G+ +GY  G ISGKEE K+VGLK GF+VGEELGFY+GC++V
Sbjct: 18  SIQDIFDSSLNLEETHFNDGFTEGYNAGLISGKEEAKQVGLKFGFQVGEELGFYRGCVDV 77

Query: 184 WNSAIQMDSSCFSSRVQKSIKQMEDLVKKYPMMEPEDESVQDVLDSLRLKFKAVSATLGV 363
           WNSAI++DS+ FSSRVQKSIKQME+L++KYP  +P+DES Q+++D+LRLKF+A+ ATL V
Sbjct: 78  WNSAIEVDSTRFSSRVQKSIKQMEELLQKYPYFDPDDESAQEIMDNLRLKFRAICATLSV 137

Query: 364 KLDYVGYPKSSS 399
           KL+Y G+ KSSS
Sbjct: 138 KLEYNGFLKSSS 149



 Score =  147 bits (372), Expect = 7e-33
 Identities = 84/192 (43%), Positives = 109/192 (56%)
 Frame = +2

Query: 1169 DMWSNRSCSYKLLISITIILVTYC*YLCADCERGKREMLRGMLACCKVYISESRNKLALI 1348
            ++  N    ++ + +   + + Y  +L +  E G+R ML+ MLACCKVYISESRN+ AL 
Sbjct: 119  EIMDNLRLKFRAICATLSVKLEYNGFLKSSSEEGER-MLKLMLACCKVYISESRNRAAL- 176

Query: 1349 SXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDEAYNRVGYTLVSEF 1528
                                                         DE YNRVGYTLVS+ 
Sbjct: 177  -------------------------ELIERAARLFPEAPIINKFEDETYNRVGYTLVSKL 211

Query: 1529 SPTQLQDSSSLRGAVVSMVKAALETIDLESHCGSHPRLGIVDHICFHPLAQTSLDQAAWL 1708
            +P    D+ +LRGAV++MVKAA E I+LE HCG+HPRLG+VDHICFHPLA  SL Q A +
Sbjct: 212  APKPSSDTCALRGAVLAMVKAAFEAINLEMHCGNHPRLGVVDHICFHPLADASLKQTAGI 271

Query: 1709 ARSVAADIGSNL 1744
            A+S+AADIGSNL
Sbjct: 272  AKSLAADIGSNL 283


>gb|AFK44048.1| unknown [Lotus japonicus]
          Length = 137

 Score =  191 bits (486), Expect = 4e-46
 Identities = 87/133 (65%), Positives = 110/133 (82%)
 Frame = +1

Query: 7   MSDIFDSSLNLEDAHFEEGYKDGYKDGKISGKEEGKEVGLKHGFEVGEELGFYKGCINVW 186
           M D+FDSSLNLE+ HF+EGY +GYKDG I+GK+E KEVGLK GFEVGEELGFY GC+++W
Sbjct: 1   MDDLFDSSLNLEETHFKEGYDEGYKDGLIAGKDEAKEVGLKVGFEVGEELGFYSGCLHIW 60

Query: 187 NSAIQMDSSCFSSRVQKSIKQMEDLVKKYPMMEPEDESVQDVLDSLRLKFKAVSATLGVK 366
            SAI++D +CFSSR + +I QM+DLV KYP+M+PED  VQ ++DSLRLKFK + ++L VK
Sbjct: 61  TSAIRLDPNCFSSRAKTTINQMQDLVHKYPLMDPEDLQVQAIMDSLRLKFKMLCSSLHVK 120

Query: 367 LDYVGYPKSSSVS 405
           LDY GYP SS  +
Sbjct: 121 LDYSGYPNSSEAT 133


>gb|ACU20037.1| unknown [Glycine max]
          Length = 138

 Score =  182 bits (462), Expect = 2e-43
 Identities = 80/131 (61%), Positives = 108/131 (82%)
 Frame = +1

Query: 7   MSDIFDSSLNLEDAHFEEGYKDGYKDGKISGKEEGKEVGLKHGFEVGEELGFYKGCINVW 186
           M D+FDSSLNLED H++EGY +GY  G ++GKEE ++VGLK GFEVGEELGFY+GC+ +W
Sbjct: 1   MDDLFDSSLNLEDTHYKEGYDEGYSHGLVTGKEEARQVGLKVGFEVGEELGFYRGCVEIW 60

Query: 187 NSAIQMDSSCFSSRVQKSIKQMEDLVKKYPMMEPEDESVQDVLDSLRLKFKAVSATLGVK 366
            SAI++D +CFS R +  I QME+L++KYP+M+PE+  VQ+++DSLRLKFK   ++L VK
Sbjct: 61  TSAIRLDPTCFSPRAKTFICQMEELIQKYPLMDPENAQVQEIMDSLRLKFKMACSSLHVK 120

Query: 367 LDYVGYPKSSS 399
           L+Y GYPKSS+
Sbjct: 121 LEYNGYPKSST 131


>ref|XP_004139960.1| PREDICTED: formimidoyltransferase-cyclodeaminase-like [Cucumis
           sativus] gi|449475733|ref|XP_004154536.1| PREDICTED:
           formimidoyltransferase-cyclodeaminase-like [Cucumis
           sativus]
          Length = 427

 Score =  182 bits (461), Expect = 3e-43
 Identities = 82/123 (66%), Positives = 108/123 (87%)
 Frame = +1

Query: 7   MSDIFDSSLNLEDAHFEEGYKDGYKDGKISGKEEGKEVGLKHGFEVGEELGFYKGCINVW 186
           M DIFDSSLNLE+AH +EGY DGYKDG ++GKEE ++VGLK GFEVGEELGFY+GC++VW
Sbjct: 1   MDDIFDSSLNLEEAHLKEGYADGYKDGLVAGKEEAEQVGLKVGFEVGEELGFYRGCVDVW 60

Query: 187 NSAIQMDSSCFSSRVQKSIKQMEDLVKKYPMMEPEDESVQDVLDSLRLKFKAVSATLGVK 366
           NS I+++   FS RV+KS+K ME+L++KYP+ +PE+E VQ++++ LRLKF+AVSATLGVK
Sbjct: 61  NSVIRIEPERFSIRVRKSVKLMEELLEKYPLQDPENEQVQELMEGLRLKFRAVSATLGVK 120

Query: 367 LDY 375
           L+Y
Sbjct: 121 LEY 123



 Score =  125 bits (313), Expect = 5e-26
 Identities = 73/158 (46%), Positives = 86/158 (54%)
 Frame = +2

Query: 1271 KREMLRGMLACCKVYISESRNKLALISXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1450
            KR+M +  LACCKVYISESRNK AL S                                 
Sbjct: 126  KRKMSKLFLACCKVYISESRNKAALESIERATKLFPDAPIINKFT--------------- 170

Query: 1451 XXXXXXXXXXXDEAYNRVGYTLVSEFSPTQLQDSSSLRGAVVSMVKAALETIDLESHCGS 1630
                       DE YNRVGYTLVS+        S SL  AV++MVKAA   ID  SHCGS
Sbjct: 171  -----------DEVYNRVGYTLVSKLPSHLSGKSCSLISAVLNMVKAAFSAIDFNSHCGS 219

Query: 1631 HPRLGIVDHICFHPLAQTSLDQAAWLARSVAADIGSNL 1744
            HPRLG+VDHICFHPLA  +L+ AA +A+ +AAD+G +L
Sbjct: 220  HPRLGVVDHICFHPLASATLEDAALIAKYLAADVGYSL 257


>ref|XP_002319920.1| predicted protein [Populus trichocarpa] gi|222858296|gb|EEE95843.1|
           predicted protein [Populus trichocarpa]
          Length = 125

 Score =  181 bits (459), Expect = 5e-43
 Identities = 79/125 (63%), Positives = 108/125 (86%)
 Frame = +1

Query: 13  DIFDSSLNLEDAHFEEGYKDGYKDGKISGKEEGKEVGLKHGFEVGEELGFYKGCINVWNS 192
           DIFDSSLNLE+ HF+EGY +GY  G +SGKEE ++ GLK GFE+GEELGFY+GC++VWNS
Sbjct: 1   DIFDSSLNLEETHFKEGYNEGYSQGLMSGKEEAEQTGLKMGFEIGEELGFYRGCVDVWNS 60

Query: 193 AIQMDSSCFSSRVQKSIKQMEDLVKKYPMMEPEDESVQDVLDSLRLKFKAVSATLGVKLD 372
           AI +D + FS+R+++SIK+ME+L++KYP+++PEDE V +++DSLRLKF+ + A LGVKL+
Sbjct: 61  AILVDPTRFSTRLKESIKKMEELIEKYPVLDPEDERVNEIMDSLRLKFRVIRAGLGVKLE 120

Query: 373 YVGYP 387
           Y GYP
Sbjct: 121 YDGYP 125


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