BLASTX nr result

ID: Coptis25_contig00004724 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00004724
         (1383 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002300305.1| predicted protein [Populus trichocarpa] gi|2...    73   2e-10
ref|XP_002299858.1| predicted protein [Populus trichocarpa] gi|2...    66   2e-08

>ref|XP_002300305.1| predicted protein [Populus trichocarpa] gi|222847563|gb|EEE85110.1|
           predicted protein [Populus trichocarpa]
          Length = 243

 Score = 72.8 bits (177), Expect = 2e-10
 Identities = 35/71 (49%), Positives = 49/71 (69%)
 Frame = -2

Query: 698 TTRLRALTLKFETYKKFSNYIMDEHLRKMSHIVNDLKVAENVFIDE*QILTVLRPLSNSW 519
           TTRLR LTLKF+ YKK  N  M +HL  MS+++++LK  E+   DE Q+  V+R L ++W
Sbjct: 67  TTRLRQLTLKFDGYKKCQNQTMRQHLTVMSNMISELKGVEHEMTDEQQVQPVIRSLPSNW 126

Query: 518 EQMNLNLTHNE 486
           E M +NL HN+
Sbjct: 127 EHMCVNLIHND 137


>ref|XP_002299858.1| predicted protein [Populus trichocarpa] gi|222847116|gb|EEE84663.1|
           predicted protein [Populus trichocarpa]
          Length = 227

 Score = 66.2 bits (160), Expect = 2e-08
 Identities = 40/119 (33%), Positives = 63/119 (52%)
 Frame = -2

Query: 698 TTRLRALTLKFETYKKFSNYIMDEHLRKMSHIVNDLKVAENVFIDE*QILTVLRPLSNSW 519
           TTRL  L LKF+ YKK  N  M ++   MS+++N+L+ AE+   DE Q+  V+  L ++W
Sbjct: 55  TTRLCQLILKFDGYKKHQNQTMRQYFIIMSNLINELRGAEHEMTDEQQVQVVIHSLPSNW 114

Query: 518 EQMNLNLTHNETYYSLFSILFQLS*YLEFETEWHAAIGLIXXXXXVTNKKKRHQGSRFK 342
           E + +NLTHN+       I   ++ ++E E +   A   I        K +   GS+ K
Sbjct: 115 EHIRVNLTHNDN----IKIFDDVARHVELEEDRLLAEKPINKAFISETKMQGSYGSKHK 169


Top