BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00004699
         (655 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002450204.1| hypothetical protein SORBIDRAFT_05g001940 [S...    99   6e-20
ref|XP_002436742.1| hypothetical protein SORBIDRAFT_10g007990 [S...   100   2e-19
gb|AAM92800.1| putative DNA helicase homolog [Oryza sativa Japon...    96   2e-19
gb|AAM93454.1| hypothetical protein, 5'-partial [Oryza sativa Ja...    96   2e-19
ref|XP_002440314.1| hypothetical protein SORBIDRAFT_09g029620 [S...    98   4e-19

>ref|XP_002450204.1| hypothetical protein SORBIDRAFT_05g001940 [Sorghum bicolor]
           gi|241936047|gb|EES09192.1| hypothetical protein
           SORBIDRAFT_05g001940 [Sorghum bicolor]
          Length = 526

 Score = 99.4 bits (246), Expect(2) = 6e-20
 Identities = 44/81 (54%), Positives = 61/81 (75%)
 Frame = -1

Query: 655 GSTTFLPRIPLKSFEYSRIPFVLTRKQFPVRLSFDFTINKSQGQTMPHIGIYPPDHIFTH 476
           G   F+PRIP+   +   +PF L RKQFP+RLSF  TINK+QGQT+PH+GIY P+ +F+H
Sbjct: 423 GKRVFIPRIPMSPSDDISLPFKLKRKQFPIRLSFAMTINKTQGQTIPHVGIYLPEPVFSH 482

Query: 475 EQLYVALTRVVSKKNTKIFGE 413
            QLYVAL+R VS++ T++  +
Sbjct: 483 GQLYVALSRGVSRQTTRVLAK 503



 Score = 23.9 bits (50), Expect(2) = 6e-20
 Identities = 12/31 (38%), Positives = 18/31 (58%)
 Frame = -2

Query: 438 RKTPRYLVKNGHLNGRQCIYTRNVVYREVLR 346
           R+T R L K          YT+N+VY++VL+
Sbjct: 495 RQTTRVLAKPKKELDPSGKYTKNIVYKDVLQ 525


>ref|XP_002436742.1| hypothetical protein SORBIDRAFT_10g007990 [Sorghum bicolor]
           gi|241914965|gb|EER88109.1| hypothetical protein
           SORBIDRAFT_10g007990 [Sorghum bicolor]
          Length = 143

 Score =  100 bits (250), Expect = 2e-19
 Identities = 45/81 (55%), Positives = 62/81 (76%)
 Frame = -1

Query: 655 GSTTFLPRIPLKSFEYSRIPFVLTRKQFPVRLSFDFTINKSQGQTMPHIGIYPPDHIFTH 476
           G   FLPRIP+   +   +PF + RKQFP+RLSF  TINK+QGQT+P++GIY P+H+F+H
Sbjct: 40  GKRVFLPRIPMSPSDDISLPFKMKRKQFPIRLSFAMTINKAQGQTIPNVGIYLPEHVFSH 99

Query: 475 EQLYVALTRVVSKKNTKIFGE 413
            QLYVAL+R VS++ T+I  +
Sbjct: 100 GQLYVALSRGVSRQTTRILSK 120


>gb|AAM92800.1| putative DNA helicase homolog [Oryza sativa Japonica Group]
          Length = 1443

 Score = 95.5 bits (236), Expect(2) = 2e-19
 Identities = 45/78 (57%), Positives = 56/78 (71%)
 Frame = -1

Query: 655  GSTTFLPRIPLKSFEYSRIPFVLTRKQFPVRLSFDFTINKSQGQTMPHIGIYPPDHIFTH 476
            G   FLPRIPL   +    PF   RKQFPVRLSF  TINK+QGQT+P++G+Y PD +F+H
Sbjct: 1336 GKRVFLPRIPLCPSDDEMFPFRFKRKQFPVRLSFAMTINKAQGQTIPNVGVYLPDPVFSH 1395

Query: 475  EQLYVALTRVVSKKNTKI 422
             QLYVAL+R  ++ N KI
Sbjct: 1396 GQLYVALSRATARMNIKI 1413



 Score = 25.8 bits (55), Expect(2) = 2e-19
 Identities = 10/11 (90%), Positives = 11/11 (100%)
 Frame = -2

Query: 381  YTRNVVYREVL 349
            YTRN+VYREVL
Sbjct: 1431 YTRNIVYREVL 1441


>gb|AAM93454.1| hypothetical protein, 5'-partial [Oryza sativa Japonica Group]
          Length = 359

 Score = 95.5 bits (236), Expect(2) = 2e-19
 Identities = 45/78 (57%), Positives = 56/78 (71%)
 Frame = -1

Query: 655 GSTTFLPRIPLKSFEYSRIPFVLTRKQFPVRLSFDFTINKSQGQTMPHIGIYPPDHIFTH 476
           G   FLPRIPL   +    PF   RKQFPVRLSF  TINK+QGQT+P++G+Y PD +F+H
Sbjct: 252 GKRVFLPRIPLCPSDDEMFPFRFKRKQFPVRLSFAMTINKAQGQTIPNVGVYLPDPVFSH 311

Query: 475 EQLYVALTRVVSKKNTKI 422
            QLYVAL+R  ++ N KI
Sbjct: 312 GQLYVALSRATARMNIKI 329



 Score = 25.8 bits (55), Expect(2) = 2e-19
 Identities = 10/11 (90%), Positives = 11/11 (100%)
 Frame = -2

Query: 381 YTRNVVYREVL 349
           YTRN+VYREVL
Sbjct: 347 YTRNIVYREVL 357


>ref|XP_002440314.1| hypothetical protein SORBIDRAFT_09g029620 [Sorghum bicolor]
            gi|241945599|gb|EES18744.1| hypothetical protein
            SORBIDRAFT_09g029620 [Sorghum bicolor]
          Length = 1108

 Score = 97.8 bits (242), Expect(2) = 4e-19
 Identities = 48/86 (55%), Positives = 59/86 (68%)
 Frame = -1

Query: 655  GSTTFLPRIPLKSFEYSRIPFVLTRKQFPVRLSFDFTINKSQGQTMPHIGIYPPDHIFTH 476
            G   FLPRIPL   +    PF L RKQFPVRLSF  TINKSQGQT+P++G+Y P+ +F+H
Sbjct: 989  GMRVFLPRIPLCPSDDEMFPFRLKRKQFPVRLSFAMTINKSQGQTIPNVGVYLPNPVFSH 1048

Query: 475  EQLYVALTRVVSKKNTKIFGEKWTSE 398
             QLYVAL+R  + KN K+   K   E
Sbjct: 1049 GQLYVALSRATATKNIKVLTGKHEEE 1074



 Score = 22.7 bits (47), Expect(2) = 4e-19
 Identities = 8/13 (61%), Positives = 11/13 (84%)
 Frame = -2

Query: 381  YTRNVVYREVLRR 343
            YT+N+VY EVL +
Sbjct: 1096 YTKNIVYTEVLTK 1108