BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00004698
         (936 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAM92800.1| putative DNA helicase homolog [Oryza sativa Japon...   140   6e-31
gb|AAM93454.1| hypothetical protein, 5'-partial [Oryza sativa Ja...   140   6e-31
ref|XP_002446095.1| hypothetical protein SORBIDRAFT_06g001660 [S...   138   2e-30
ref|XP_002450204.1| hypothetical protein SORBIDRAFT_05g001940 [S...   137   4e-30
ref|XP_002460012.1| hypothetical protein SORBIDRAFT_02g020820 [S...   137   4e-30

>gb|AAM92800.1| putative DNA helicase homolog [Oryza sativa Japonica Group]
          Length = 1443

 Score =  140 bits (352), Expect = 6e-31
 Identities = 75/140 (53%), Positives = 95/140 (67%), Gaps = 4/140 (2%)
 Frame = +2

Query: 62   INPGKGLCNGTKLLCRGFYSNFIFVEIIVSGNISGSTTFLPRIPLKSSEYPLIPFVLTRK 241
            I+P  GLCNGT+L+ RGF  N I  EI++ G  +G   FLPRIPL  S+  + PF   RK
Sbjct: 1303 IDPANGLCNGTRLVVRGFQRNTIDAEIVL-GQHAGKRVFLPRIPLCPSDDEMFPFRFKRK 1361

Query: 242  QFPLCLSFDFTINKSQG*TIPHVGIYLPYHIFTHGQLYVALSRAV*KRNTKILV----KN 409
            QFP+ LSF  TINK+QG TIP+VG+YLP  +F+HGQLYVALSRA  + N KIL       
Sbjct: 1362 QFPVRLSFAMTINKAQGQTIPNVGVYLPDPVFSHGQLYVALSRATARMNIKILAVQSKDK 1421

Query: 410  GHLNGRQCIYSRNVVYREVM 469
             H +  +  Y+RN+VYREV+
Sbjct: 1422 SHRSMSRGTYTRNIVYREVL 1441


>gb|AAM93454.1| hypothetical protein, 5'-partial [Oryza sativa Japonica Group]
          Length = 359

 Score =  140 bits (352), Expect = 6e-31
 Identities = 75/140 (53%), Positives = 95/140 (67%), Gaps = 4/140 (2%)
 Frame = +2

Query: 62  INPGKGLCNGTKLLCRGFYSNFIFVEIIVSGNISGSTTFLPRIPLKSSEYPLIPFVLTRK 241
           I+P  GLCNGT+L+ RGF  N I  EI++ G  +G   FLPRIPL  S+  + PF   RK
Sbjct: 219 IDPANGLCNGTRLVVRGFQRNTIDAEIVL-GQHAGKRVFLPRIPLCPSDDEMFPFRFKRK 277

Query: 242 QFPLCLSFDFTINKSQG*TIPHVGIYLPYHIFTHGQLYVALSRAV*KRNTKILV----KN 409
           QFP+ LSF  TINK+QG TIP+VG+YLP  +F+HGQLYVALSRA  + N KIL       
Sbjct: 278 QFPVRLSFAMTINKAQGQTIPNVGVYLPDPVFSHGQLYVALSRATARMNIKILAVQSKDK 337

Query: 410 GHLNGRQCIYSRNVVYREVM 469
            H +  +  Y+RN+VYREV+
Sbjct: 338 SHRSMSRGTYTRNIVYREVL 357


>ref|XP_002446095.1| hypothetical protein SORBIDRAFT_06g001660 [Sorghum bicolor]
            gi|241937278|gb|EES10423.1| hypothetical protein
            SORBIDRAFT_06g001660 [Sorghum bicolor]
          Length = 1484

 Score =  138 bits (347), Expect = 2e-30
 Identities = 75/143 (52%), Positives = 99/143 (69%), Gaps = 7/143 (4%)
 Frame = +2

Query: 62   INPGKGLCNGTKLLCRGFYSNFIFVEIIVSGNISGSTTFLPRIPLKSSEYPLIPFVLTRK 241
            I+P  GLCNGT+L+ RGF  N I  EI+V G+ +G   FLPRIPL  S+  + PF   RK
Sbjct: 1341 IDPAGGLCNGTRLVVRGFQRNIIDAEIMV-GDHAGKRIFLPRIPLCPSDDEMFPFQFKRK 1399

Query: 242  QFPLCLSFDFTINKSQG*TIPHVGIYLPYHIFTHGQLYVALSRAV*KRNTKILV-----K 406
            QFP+ LSF  TINK+QG T+P+VG+YLP  +F+HGQLYVALSRA  + N +ILV     +
Sbjct: 1400 QFPIRLSFAMTINKAQGQTLPNVGVYLPEPVFSHGQLYVALSRATARSNIRILVVPPSDR 1459

Query: 407  NGHLNGRQC--IYSRNVVYREVM 469
            N   N  +   IY++N+VY+EV+
Sbjct: 1460 NDKKNKTKINGIYTKNIVYKEVL 1482


>ref|XP_002450204.1| hypothetical protein SORBIDRAFT_05g001940 [Sorghum bicolor]
           gi|241936047|gb|EES09192.1| hypothetical protein
           SORBIDRAFT_05g001940 [Sorghum bicolor]
          Length = 526

 Score =  137 bits (345), Expect = 4e-30
 Identities = 70/137 (51%), Positives = 94/137 (68%)
 Frame = +2

Query: 62  INPGKGLCNGTKLLCRGFYSNFIFVEIIVSGNISGSTTFLPRIPLKSSEYPLIPFVLTRK 241
           ++P  GLCNGT+L+ R F  N I  EI V G  +G   F+PRIP+  S+   +PF L RK
Sbjct: 390 LDPNNGLCNGTRLMVRTFQDNAIDAEI-VGGQHAGKRVFIPRIPMSPSDDISLPFKLKRK 448

Query: 242 QFPLCLSFDFTINKSQG*TIPHVGIYLPYHIFTHGQLYVALSRAV*KRNTKILVKNGHLN 421
           QFP+ LSF  TINK+QG TIPHVGIYLP  +F+HGQLYVALSR V ++ T++L K     
Sbjct: 449 QFPIRLSFAMTINKTQGQTIPHVGIYLPEPVFSHGQLYVALSRGVSRQTTRVLAKPKKEL 508

Query: 422 GRQCIYSRNVVYREVMR 472
                Y++N+VY++V++
Sbjct: 509 DPSGKYTKNIVYKDVLQ 525


>ref|XP_002460012.1| hypothetical protein SORBIDRAFT_02g020820 [Sorghum bicolor]
            gi|241923389|gb|EER96533.1| hypothetical protein
            SORBIDRAFT_02g020820 [Sorghum bicolor]
          Length = 1234

 Score =  137 bits (345), Expect = 4e-30
 Identities = 74/146 (50%), Positives = 98/146 (67%), Gaps = 10/146 (6%)
 Frame = +2

Query: 62   INPGKGLCNGTKLLCRGFYSNFIFVEIIVSGNISGSTTFLPRIPLKSSEYPLIPFVLTRK 241
            I+P  GLCNGT+L+ RGF  N I  EI+V G+ +G   FLPRIPL  S+  + PF   RK
Sbjct: 1091 IDPAGGLCNGTRLVVRGFQRNIIDAEIMV-GDHAGKRIFLPRIPLCPSDDEMFPFQFKRK 1149

Query: 242  QFPLCLSFDFTINKSQG*TIPHVGIYLPYHIFTHGQLYVALSRAV*KRNTKILV------ 403
            QFP+ LSF  TINK+QG T+P++G+YLP  +F+HGQLYVALSRA  + N +IL       
Sbjct: 1150 QFPIRLSFAMTINKAQGQTLPNIGVYLPEPVFSHGQLYVALSRATARLNIRILAVLPSDK 1209

Query: 404  ----KNGHLNGRQCIYSRNVVYREVM 469
                KN  +NG    Y++N+VY+EV+
Sbjct: 1210 NDKKKNTKING---TYTKNIVYKEVL 1232