BLASTX nr result

ID: Coptis25_contig00004674 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00004674
         (639 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002315633.1| multidrug resistance protein ABC transporter...   122   7e-26
ref|XP_002312645.1| multidrug resistance protein ABC transporter...   120   2e-25
ref|XP_004169512.1| PREDICTED: LOW QUALITY PROTEIN: ABC transpor...   117   1e-24
ref|XP_004135511.1| PREDICTED: ABC transporter C family member 3...   117   1e-24
ref|XP_002515003.1| multidrug resistance-associated protein 2, 6...   115   9e-24

>ref|XP_002315633.1| multidrug resistance protein ABC transporter family [Populus
           trichocarpa] gi|222864673|gb|EEF01804.1| multidrug
           resistance protein ABC transporter family [Populus
           trichocarpa]
          Length = 1044

 Score =  122 bits (305), Expect = 7e-26
 Identities = 58/71 (81%), Positives = 67/71 (94%)
 Frame = +2

Query: 425 LFWISPTLVSVVTFGVCVLVRTPLTSGTVLSALATFRILQEPIYNLPELISAIAQMKVSV 604
           LFW SPTLVSVVTFGVC++++TPLT+GTVLSALATFRILQEPIYNLPELIS IAQ KVS+
Sbjct: 128 LFWASPTLVSVVTFGVCIILKTPLTTGTVLSALATFRILQEPIYNLPELISMIAQTKVSI 187

Query: 605 DRINDFIREEN 637
           DRI DF+RE++
Sbjct: 188 DRIQDFLREKD 198



 Score =  100 bits (250), Expect = 2e-19
 Identities = 47/68 (69%), Positives = 59/68 (86%)
 Frame = -2

Query: 206 DNNKEEVTETGRVKWQVYSTFVSSAYKGSLIPVILLCQVLFQLL*IGSNYWIASATKEES 27
           +  +EEV+ETGRVKW VYSTF++SAYKG+L+P+ILLCQVLFQ L +GSNYWIA AT+E  
Sbjct: 472 ERTQEEVSETGRVKWSVYSTFITSAYKGALVPIILLCQVLFQGLQMGSNYWIAWATEENH 531

Query: 26  VVSKKKLI 3
            V+K+KLI
Sbjct: 532 KVTKEKLI 539


>ref|XP_002312645.1| multidrug resistance protein ABC transporter family [Populus
           trichocarpa] gi|222852465|gb|EEE90012.1| multidrug
           resistance protein ABC transporter family [Populus
           trichocarpa]
          Length = 1361

 Score =  120 bits (302), Expect = 2e-25
 Identities = 58/71 (81%), Positives = 66/71 (92%)
 Frame = +2

Query: 425 LFWISPTLVSVVTFGVCVLVRTPLTSGTVLSALATFRILQEPIYNLPELISAIAQMKVSV 604
           LFW SPTLVSVVTFGVC+L++TPLT+GTVLSALATFRILQEPIYNLPELIS IAQ KVS+
Sbjct: 389 LFWASPTLVSVVTFGVCILLKTPLTTGTVLSALATFRILQEPIYNLPELISMIAQTKVSI 448

Query: 605 DRINDFIREEN 637
           DRI DF+ E++
Sbjct: 449 DRIQDFLSEDD 459



 Score = 97.1 bits (240), Expect = 3e-18
 Identities = 45/65 (69%), Positives = 58/65 (89%)
 Frame = -2

Query: 197 KEEVTETGRVKWQVYSTFVSSAYKGSLIPVILLCQVLFQLL*IGSNYWIASATKEESVVS 18
           +EEV+ETGRVKW VYSTF++SAYKG+L+P+ILLCQVLFQ L +GSNYWIA AT++   V+
Sbjct: 779 QEEVSETGRVKWSVYSTFITSAYKGALVPIILLCQVLFQGLQMGSNYWIAWATEKSHNVT 838

Query: 17  KKKLI 3
           ++KLI
Sbjct: 839 REKLI 843


>ref|XP_004169512.1| PREDICTED: LOW QUALITY PROTEIN: ABC transporter C family member
           3-like [Cucumis sativus]
          Length = 1444

 Score =  117 bits (294), Expect = 1e-24
 Identities = 56/71 (78%), Positives = 65/71 (91%)
 Frame = +2

Query: 425 LFWISPTLVSVVTFGVCVLVRTPLTSGTVLSALATFRILQEPIYNLPELISAIAQMKVSV 604
           LFW+SPTLVSV TFG CV+++ PLT+GTVLSA+ATFRILQEPIYNLPELIS IAQ KVS+
Sbjct: 479 LFWVSPTLVSVFTFGACVMMKVPLTAGTVLSAIATFRILQEPIYNLPELISMIAQTKVSL 538

Query: 605 DRINDFIREEN 637
           DRI +FIREE+
Sbjct: 539 DRIQEFIREED 549



 Score = 97.1 bits (240), Expect = 3e-18
 Identities = 43/65 (66%), Positives = 58/65 (89%)
 Frame = -2

Query: 197  KEEVTETGRVKWQVYSTFVSSAYKGSLIPVILLCQVLFQLL*IGSNYWIASATKEESVVS 18
            +EE  +TGRVKW VYSTF++SAYKG+L+P+ILLCQVLFQ+L +GSNYWI+ AT+EE  VS
Sbjct: 843  QEEEIQTGRVKWSVYSTFITSAYKGALVPIILLCQVLFQILQMGSNYWISWATEEEGKVS 902

Query: 17   KKKLI 3
            +++L+
Sbjct: 903  REQLL 907


>ref|XP_004135511.1| PREDICTED: ABC transporter C family member 3-like [Cucumis sativus]
          Length = 1444

 Score =  117 bits (294), Expect = 1e-24
 Identities = 56/71 (78%), Positives = 65/71 (91%)
 Frame = +2

Query: 425 LFWISPTLVSVVTFGVCVLVRTPLTSGTVLSALATFRILQEPIYNLPELISAIAQMKVSV 604
           LFW+SPTLVSV TFG CV+++ PLT+GTVLSA+ATFRILQEPIYNLPELIS IAQ KVS+
Sbjct: 479 LFWVSPTLVSVFTFGACVMMKVPLTAGTVLSAIATFRILQEPIYNLPELISMIAQTKVSL 538

Query: 605 DRINDFIREEN 637
           DRI +FIREE+
Sbjct: 539 DRIQEFIREED 549



 Score = 97.1 bits (240), Expect = 3e-18
 Identities = 43/65 (66%), Positives = 58/65 (89%)
 Frame = -2

Query: 197  KEEVTETGRVKWQVYSTFVSSAYKGSLIPVILLCQVLFQLL*IGSNYWIASATKEESVVS 18
            +EE  +TGRVKW VYSTF++SAYKG+L+P+ILLCQVLFQ+L +GSNYWI+ AT+EE  VS
Sbjct: 843  QEEEIQTGRVKWSVYSTFITSAYKGALVPIILLCQVLFQILQMGSNYWISWATEEEGKVS 902

Query: 17   KKKLI 3
            +++L+
Sbjct: 903  REQLL 907


>ref|XP_002515003.1| multidrug resistance-associated protein 2, 6 (mrp2, 6),
           abc-transoprter, putative [Ricinus communis]
           gi|223546054|gb|EEF47557.1| multidrug
           resistance-associated protein 2, 6 (mrp2, 6),
           abc-transoprter, putative [Ricinus communis]
          Length = 1464

 Score =  115 bits (287), Expect = 9e-24
 Identities = 56/70 (80%), Positives = 64/70 (91%)
 Frame = +2

Query: 425 LFWISPTLVSVVTFGVCVLVRTPLTSGTVLSALATFRILQEPIYNLPELISAIAQMKVSV 604
           LFW SPTLVSV+TFGVC+L++ PLT+GTVLSALATFRILQEPIYNLPELIS IAQ KVSV
Sbjct: 511 LFWASPTLVSVITFGVCILLKIPLTTGTVLSALATFRILQEPIYNLPELISMIAQTKVSV 570

Query: 605 DRINDFIREE 634
            RI +FI++E
Sbjct: 571 YRIQEFIKDE 580



 Score = 94.7 bits (234), Expect = 1e-17
 Identities = 44/68 (64%), Positives = 57/68 (83%)
 Frame = -2

Query: 206  DNNKEEVTETGRVKWQVYSTFVSSAYKGSLIPVILLCQVLFQLL*IGSNYWIASATKEES 27
            +  +EE TETGRVKW VYSTFV+SAYKG+L+PVILLCQV FQ L +GSNYWIA A+++  
Sbjct: 872  EGTQEEETETGRVKWSVYSTFVTSAYKGALVPVILLCQVFFQGLQMGSNYWIAWASEDRH 931

Query: 26   VVSKKKLI 3
             +S+++LI
Sbjct: 932  KISREQLI 939


Top