BLASTX nr result

ID: Coptis25_contig00004652 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00004652
         (209 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK48431.1| unknown [Medicago truncatula]                          105   5e-21
ref|NP_001140509.1| uncharacterized protein LOC100272571 [Zea ma...   100   9e-20
ref|XP_004133736.1| PREDICTED: UPF0420 protein C16orf58 homolog ...   100   2e-19
tpg|DAA56462.1| TPA: hypothetical protein ZEAMMB73_966463 [Zea m...    98   6e-19
ref|XP_003633414.1| PREDICTED: UPF0420 protein C16orf58 homolog ...    98   6e-19

>gb|AFK48431.1| unknown [Medicago truncatula]
          Length = 236

 Score =  105 bits (261), Expect = 5e-21
 Identities = 48/68 (70%), Positives = 58/68 (85%)
 Frame = -1

Query: 206 SSSSAKFNNRPSSSSVRAISLQAPQPPIDEFMSFIRSYVVPEGFPDSVSTSYVPYMKWRA 27
           + +S KFNN    +S R++SLQ P+PP+DEF+SF+RSYVVPEGFPDSV+ SYVPYM WRA
Sbjct: 82  TDASGKFNN----NSFRSLSLQTPKPPLDEFISFVRSYVVPEGFPDSVTPSYVPYMTWRA 137

Query: 26  LKHFFGGA 3
           LKHFFGGA
Sbjct: 138 LKHFFGGA 145


>ref|NP_001140509.1| uncharacterized protein LOC100272571 [Zea mays]
           gi|194699768|gb|ACF83968.1| unknown [Zea mays]
          Length = 491

 Score =  100 bits (250), Expect = 9e-20
 Identities = 45/58 (77%), Positives = 51/58 (87%)
 Frame = -1

Query: 176 PSSSSVRAISLQAPQPPIDEFMSFIRSYVVPEGFPDSVSTSYVPYMKWRALKHFFGGA 3
           P+ +SVRA+ LQ+P PP +E MSFIRSYVVPEGFPDSV+ SYVPYM WRALKHFFGGA
Sbjct: 88  PAGASVRAVPLQSPLPPAEEIMSFIRSYVVPEGFPDSVTPSYVPYMNWRALKHFFGGA 145


>ref|XP_004133736.1| PREDICTED: UPF0420 protein C16orf58 homolog [Cucumis sativus]
           gi|449478104|ref|XP_004155224.1| PREDICTED: UPF0420
           protein C16orf58 homolog [Cucumis sativus]
          Length = 507

 Score = 99.8 bits (247), Expect = 2e-19
 Identities = 45/56 (80%), Positives = 50/56 (89%)
 Frame = -1

Query: 170 SSSVRAISLQAPQPPIDEFMSFIRSYVVPEGFPDSVSTSYVPYMKWRALKHFFGGA 3
           ++S+RA+ LQ PQ PIDE MSFIRSYVVPEGFPDSV+ SYVPYM WRALKHFFGGA
Sbjct: 98  NASIRALCLQTPQAPIDEMMSFIRSYVVPEGFPDSVTPSYVPYMTWRALKHFFGGA 153


>tpg|DAA56462.1| TPA: hypothetical protein ZEAMMB73_966463 [Zea mays]
           gi|414879332|tpg|DAA56463.1| TPA: hypothetical protein
           ZEAMMB73_966463 [Zea mays]
          Length = 503

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 43/58 (74%), Positives = 51/58 (87%)
 Frame = -1

Query: 176 PSSSSVRAISLQAPQPPIDEFMSFIRSYVVPEGFPDSVSTSYVPYMKWRALKHFFGGA 3
           P+ ++VRA+ LQ+P PP +E M+FIRSYVVPEGFPDSV+ SYVPYM WRALKHFFGGA
Sbjct: 87  PAGAAVRAVPLQSPLPPAEEIMAFIRSYVVPEGFPDSVTPSYVPYMTWRALKHFFGGA 144


>ref|XP_003633414.1| PREDICTED: UPF0420 protein C16orf58 homolog [Vitis vinifera]
           gi|297739449|emb|CBI29631.3| unnamed protein product
           [Vitis vinifera]
          Length = 504

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 44/61 (72%), Positives = 50/61 (81%)
 Frame = -1

Query: 185 NNRPSSSSVRAISLQAPQPPIDEFMSFIRSYVVPEGFPDSVSTSYVPYMKWRALKHFFGG 6
           N +  + S+RA+  Q PQ P+DE MSFIRSYVVPEGFPDSV+ SYVPYM WRALKHFFGG
Sbjct: 88  NGQGRNGSLRAVCSQTPQAPVDELMSFIRSYVVPEGFPDSVTPSYVPYMSWRALKHFFGG 147

Query: 5   A 3
           A
Sbjct: 148 A 148


Top