BLASTX nr result

ID: Coptis25_contig00004638 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00004638
         (238 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002873555.1| dihydropyrimidinase [Arabidopsis lyrata subs...   109   3e-22
dbj|BAD93873.1| dihydropyrimidinase like protein [Arabidopsis th...   108   6e-22
gb|AAK44096.1|AF370281_1 putative dihydropyrimidinase [Arabidops...   108   6e-22
ref|NP_568258.2| pyrimidine 2 [Arabidopsis thaliana] gi|28194047...   108   6e-22
ref|XP_003545693.1| PREDICTED: dihydropyrimidinase-like [Glycine...   107   8e-22

>ref|XP_002873555.1| dihydropyrimidinase [Arabidopsis lyrata subsp. lyrata]
           gi|297319392|gb|EFH49814.1| dihydropyrimidinase
           [Arabidopsis lyrata subsp. lyrata]
          Length = 531

 Score =  109 bits (272), Expect = 3e-22
 Identities = 55/79 (69%), Positives = 58/79 (73%)
 Frame = +1

Query: 1   WLWDNDFTTAAKQELAYLSATRVFHCSRYVMSPPIRKLGHGKALQAALSTGTLQLVGTDH 180
           WLWD DFT A+K                YVMSPPIR +GHGKALQ ALSTG LQLVGTDH
Sbjct: 317 WLWDPDFTIASK----------------YVMSPPIRPVGHGKALQDALSTGILQLVGTDH 360

Query: 181 CTFNSTQKALGIDDFRKIP 237
           CTFNSTQKALG+DDFRKIP
Sbjct: 361 CTFNSTQKALGLDDFRKIP 379


>dbj|BAD93873.1| dihydropyrimidinase like protein [Arabidopsis thaliana]
          Length = 243

 Score =  108 bits (269), Expect = 6e-22
 Identities = 54/79 (68%), Positives = 58/79 (73%)
 Frame = +1

Query: 1   WLWDNDFTTAAKQELAYLSATRVFHCSRYVMSPPIRKLGHGKALQAALSTGTLQLVGTDH 180
           WLWD DFT A+K                YVMSPPIR +GHGKALQ ALSTG LQLVGTDH
Sbjct: 29  WLWDPDFTIASK----------------YVMSPPIRPVGHGKALQDALSTGILQLVGTDH 72

Query: 181 CTFNSTQKALGIDDFRKIP 237
           CTFNSTQKALG+DDFR+IP
Sbjct: 73  CTFNSTQKALGLDDFRRIP 91


>gb|AAK44096.1|AF370281_1 putative dihydropyrimidinase [Arabidopsis thaliana]
           gi|17104601|gb|AAL34189.1| putative dihydropyrimidinase
           [Arabidopsis thaliana]
          Length = 248

 Score =  108 bits (269), Expect = 6e-22
 Identities = 54/79 (68%), Positives = 58/79 (73%)
 Frame = +1

Query: 1   WLWDNDFTTAAKQELAYLSATRVFHCSRYVMSPPIRKLGHGKALQAALSTGTLQLVGTDH 180
           WLWD DFT A+K                YVMSPPIR +GHGKALQ ALSTG LQLVGTDH
Sbjct: 34  WLWDPDFTIASK----------------YVMSPPIRPVGHGKALQDALSTGILQLVGTDH 77

Query: 181 CTFNSTQKALGIDDFRKIP 237
           CTFNSTQKALG+DDFR+IP
Sbjct: 78  CTFNSTQKALGLDDFRRIP 96


>ref|NP_568258.2| pyrimidine 2 [Arabidopsis thaliana]
           gi|28194047|gb|AAO33381.1|AF465755_1 dihydropyrimidine
           amidohydrolase [Arabidopsis thaliana]
           gi|9759387|dbj|BAB10038.1| dihydropyrimidinase
           [Arabidopsis thaliana] gi|332004390|gb|AED91773.1|
           pyrimidine 2 [Arabidopsis thaliana]
          Length = 531

 Score =  108 bits (269), Expect = 6e-22
 Identities = 54/79 (68%), Positives = 58/79 (73%)
 Frame = +1

Query: 1   WLWDNDFTTAAKQELAYLSATRVFHCSRYVMSPPIRKLGHGKALQAALSTGTLQLVGTDH 180
           WLWD DFT A+K                YVMSPPIR +GHGKALQ ALSTG LQLVGTDH
Sbjct: 317 WLWDPDFTIASK----------------YVMSPPIRPVGHGKALQDALSTGILQLVGTDH 360

Query: 181 CTFNSTQKALGIDDFRKIP 237
           CTFNSTQKALG+DDFR+IP
Sbjct: 361 CTFNSTQKALGLDDFRRIP 379


>ref|XP_003545693.1| PREDICTED: dihydropyrimidinase-like [Glycine max]
          Length = 524

 Score =  107 bits (268), Expect = 8e-22
 Identities = 56/79 (70%), Positives = 56/79 (70%)
 Frame = +1

Query: 1   WLWDNDFTTAAKQELAYLSATRVFHCSRYVMSPPIRKLGHGKALQAALSTGTLQLVGTDH 180
           WLW  DF TAAK                YVMSPPIRK GH KALQAALSTG LQLVGTDH
Sbjct: 311 WLWHPDFETAAK----------------YVMSPPIRKRGHDKALQAALSTGVLQLVGTDH 354

Query: 181 CTFNSTQKALGIDDFRKIP 237
           C FNSTQKALGIDDFRKIP
Sbjct: 355 CAFNSTQKALGIDDFRKIP 373


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