BLASTX nr result

ID: Coptis25_contig00004632 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00004632
         (1033 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI19400.3| unnamed protein product [Vitis vinifera]              375   e-101
ref|XP_002285329.1| PREDICTED: tetratricopeptide repeat protein ...   372   e-100
ref|XP_002320688.1| predicted protein [Populus trichocarpa] gi|2...   359   5e-97
ref|XP_002302407.1| predicted protein [Populus trichocarpa] gi|2...   348   2e-93
emb|CAN72853.1| hypothetical protein VITISV_013944 [Vitis vinifera]   347   4e-93

>emb|CBI19400.3| unnamed protein product [Vitis vinifera]
          Length = 648

 Score =  375 bits (962), Expect = e-101
 Identities = 191/312 (61%), Positives = 245/312 (78%), Gaps = 2/312 (0%)
 Frame = -2

Query: 1032 QAYKFLGVCCGNASRVSGSDTQRVLFQSESLKSLTNASMMERDDPEIIFNLGLENAVQRN 853
            + +KFLG+C GNA+R    D++RV  Q++SL SL  AS++   DPE+IF+L LENAVQRN
Sbjct: 337  ETHKFLGICYGNAARACVLDSERVALQTDSLNSLNQASLIGHKDPELIFSLALENAVQRN 396

Query: 852  LNAALRYVRTYLKLMGGSSLNGWKLLSLVLSAEERFEDAETIVDLALDEAGIRDELELLR 673
            L+AA      Y  ++ GSS  GWKLL+LV+SAE+RF+DAETIVDLALDEAG  D+LELLR
Sbjct: 397  LDAAFSNAIMYSDMVAGSSGRGWKLLALVVSAEQRFKDAETIVDLALDEAGRIDQLELLR 456

Query: 672  LKAVLQIAQEQPKNAIETFRVLLSLIHTHKEIGPK--NPEVQSKSDLEMKAWQDLSNVYT 499
            LKAVLQIAQEQPK AIET+R+LL+LI   +E+     + EV ++ +LE + WQDL+N+YT
Sbjct: 457  LKAVLQIAQEQPKQAIETYRILLALIQAQREVQANKFHSEVSAERNLETQTWQDLANIYT 516

Query: 498  RLGSWSDAGICVEKAKSIRHCSADSWHQTGLLFVAQTLYKKALVAFSISLSIEPDHAPSM 319
            +LG WSDA IC++KAKSI   S+ SWH+TG+   AQ+LYK+ALV+FS+SLSIEPD+ PS+
Sbjct: 517  KLGLWSDAEICLDKAKSIEFYSSRSWHKTGISLEAQSLYKEALVSFSVSLSIEPDYVPSI 576

Query: 318  VSTAAILRKFGKNSLPIAKSFLMNAVRLQPTNDEAWLNLGLISKMEGSIXXXXXXXXXAY 139
            VSTA +L KFGK SLPIA+SFLMNA+RL+PTN EAWLNLGL+SKMEGS+         AY
Sbjct: 577  VSTAEVLMKFGKPSLPIARSFLMNALRLEPTNHEAWLNLGLVSKMEGSLQQAADYFQAAY 636

Query: 138  ELKQSAPVLNYL 103
            ELK SAP+ +++
Sbjct: 637  ELKLSAPIQSFV 648


>ref|XP_002285329.1| PREDICTED: tetratricopeptide repeat protein 7A-like [Vitis vinifera]
          Length = 705

 Score =  372 bits (954), Expect = e-100
 Identities = 191/311 (61%), Positives = 243/311 (78%), Gaps = 1/311 (0%)
 Frame = -2

Query: 1032 QAYKFLGVCCGNASRVSGSDTQRVLFQSESLKSLTNASMMERDDPEIIFNLGLENAVQRN 853
            + +KFLG+C GNA+R    D++RV  Q++SL SL  AS++   DPE+IF+L LENAVQRN
Sbjct: 395  ETHKFLGICYGNAARACVLDSERVALQTDSLNSLNQASLIGHKDPELIFSLALENAVQRN 454

Query: 852  LNAALRYVRTYLKLMGGSSLNGWKLLSLVLSAEERFEDAETIVDLALDEAGIRDELELLR 673
            L+AA      Y  ++ GSS  GWKLL+LV+SAE+RF+DAETIVDLALDEAG  D+LELLR
Sbjct: 455  LDAAFSNAIMYSDMVAGSSGRGWKLLALVVSAEQRFKDAETIVDLALDEAGRIDQLELLR 514

Query: 672  LKAVLQIAQEQPKNAIETFRVLLSLIHTHKEI-GPKNPEVQSKSDLEMKAWQDLSNVYTR 496
            LKAVLQIAQEQPK AIET+R+LL+LI   +E+   K     S+ +LE + WQDL+N+YT+
Sbjct: 515  LKAVLQIAQEQPKQAIETYRILLALIQAQREVQANKFHSEVSERNLETQTWQDLANIYTK 574

Query: 495  LGSWSDAGICVEKAKSIRHCSADSWHQTGLLFVAQTLYKKALVAFSISLSIEPDHAPSMV 316
            LG WSDA IC++KAKSI   S+ SWH+TG+   AQ+LYK+ALV+FS+SLSIEPD+ PS+V
Sbjct: 575  LGLWSDAEICLDKAKSIEFYSSRSWHKTGISLEAQSLYKEALVSFSVSLSIEPDYVPSIV 634

Query: 315  STAAILRKFGKNSLPIAKSFLMNAVRLQPTNDEAWLNLGLISKMEGSIXXXXXXXXXAYE 136
            STA +L KFGK SLPIA+SFLMNA+RL+PTN EAWLNLGL+SKMEGS+         AYE
Sbjct: 635  STAEVLMKFGKPSLPIARSFLMNALRLEPTNHEAWLNLGLVSKMEGSLQQAADYFQAAYE 694

Query: 135  LKQSAPVLNYL 103
            LK SAP+ +++
Sbjct: 695  LKLSAPIQSFV 705


>ref|XP_002320688.1| predicted protein [Populus trichocarpa] gi|222861461|gb|EEE99003.1|
            predicted protein [Populus trichocarpa]
          Length = 714

 Score =  359 bits (922), Expect = 5e-97
 Identities = 182/318 (57%), Positives = 243/318 (76%), Gaps = 8/318 (2%)
 Frame = -2

Query: 1032 QAYKFLGVCCGNASRVSGSDTQRVLFQSESLKSLTNASMMERDDPEIIFNLGLENAVQRN 853
            QA+  LGVC GNA+R+S SD++RVL   ESL SL NA++  ++DPE+++NLGLEN +QRN
Sbjct: 397  QAHMLLGVCHGNAARISLSDSERVLLHKESLNSLNNAALNRKEDPEVMYNLGLENMLQRN 456

Query: 852  LNAALRYVRTYLKLMGGSSLNGWKLLSLVLSAEERFEDAETIVDLALDEAGIRDELELLR 673
            L AA        ++M G+S+ GWKLL+LV+SAE+RF DA+T+V++ALDEAG  D+ ELLR
Sbjct: 457  LGAAFENAIVCTEMMAGNSVKGWKLLALVVSAEQRFRDAQTVVEIALDEAGRIDQFELLR 516

Query: 672  LKAVLQIAQEQPKNAIETFRVLLSLIHTHKEIGPKNP--------EVQSKSDLEMKAWQD 517
            LKA+LQIAQEQPK AIET+R+LLSLI   ++   KNP        EV ++ +LE+ AWQD
Sbjct: 517  LKAILQIAQEQPKQAIETYRILLSLIQAQRDSQAKNPEQAHIFNSEVLAERNLELAAWQD 576

Query: 516  LSNVYTRLGSWSDAGICVEKAKSIRHCSADSWHQTGLLFVAQTLYKKALVAFSISLSIEP 337
            L+++YT++GSWSDA ICV+KAK +   S  SWH TG+LF AQ+L+K+ALV+FS++LS+EP
Sbjct: 577  LADIYTKIGSWSDAKICVDKAKLMELHSPRSWHVTGMLFEAQSLHKEALVSFSVALSVEP 636

Query: 336  DHAPSMVSTAAILRKFGKNSLPIAKSFLMNAVRLQPTNDEAWLNLGLISKMEGSIXXXXX 157
            D+ PS+V+TA +L K G  S  IA+SFLM+A+RL PTN EAWLNLGLISKMEGS+     
Sbjct: 637  DYIPSIVATAEVLMKPGTQSFSIARSFLMHALRLDPTNHEAWLNLGLISKMEGSLKQAAE 696

Query: 156  XXXXAYELKQSAPVLNYL 103
                A+ELK SAP+ ++L
Sbjct: 697  FFQAAHELKLSAPIQSFL 714


>ref|XP_002302407.1| predicted protein [Populus trichocarpa] gi|222844133|gb|EEE81680.1|
            predicted protein [Populus trichocarpa]
          Length = 708

 Score =  348 bits (892), Expect = 2e-93
 Identities = 176/314 (56%), Positives = 236/314 (75%), Gaps = 8/314 (2%)
 Frame = -2

Query: 1032 QAYKFLGVCCGNASRVSGSDTQRVLFQSESLKSLTNASMMERDDPEIIFNLGLENAVQRN 853
            QA+K LG+C GNA+RVS SD++R L   ES+ SL NA++   +DPE++++LGLEN +QRN
Sbjct: 391  QAHKCLGICYGNAARVSLSDSERFLLHKESVNSLNNAALNRNEDPEVMYSLGLENMLQRN 450

Query: 852  LNAALRYVRTYLKLMGGSSLNGWKLLSLVLSAEERFEDAETIVDLALDEAGIRDELELLR 673
            L AA        ++M G+++ GWKLL+LV+SAE+RF DA+T+V+ ALD A   ++ ELLR
Sbjct: 451  LGAAFDNAIVCSEMMAGNTVKGWKLLALVVSAEQRFRDAQTVVEFALDAAERIEQFELLR 510

Query: 672  LKAVLQIAQEQPKNAIETFRVLLSLIHTHKEIGPKNP--------EVQSKSDLEMKAWQD 517
            LKAVLQIAQEQPK AIET+R+LLSLI   ++I  KNP        EV ++ +LE+ AWQD
Sbjct: 511  LKAVLQIAQEQPKQAIETYRILLSLIQAQRDIQAKNPEQAHILKSEVLAERNLELAAWQD 570

Query: 516  LSNVYTRLGSWSDAGICVEKAKSIRHCSADSWHQTGLLFVAQTLYKKALVAFSISLSIEP 337
            L+++YT++GSW DA ICV+KAK +   S  SWH TG+ F +Q+L+K+ALV+FS+SLS+EP
Sbjct: 571  LADIYTKIGSWGDAKICVDKAKLMELHSPRSWHSTGMFFESQSLHKEALVSFSVSLSVEP 630

Query: 336  DHAPSMVSTAAILRKFGKNSLPIAKSFLMNAVRLQPTNDEAWLNLGLISKMEGSIXXXXX 157
            D+ PS+V+TA +L K G  SLPIA+SFLM+A+RL PTN EAWLNLGLISKMEGS+     
Sbjct: 631  DYVPSIVATAEVLMKLGTQSLPIARSFLMHALRLDPTNHEAWLNLGLISKMEGSLKQAAE 690

Query: 156  XXXXAYELKQSAPV 115
                A+EL  SAP+
Sbjct: 691  FFQAAHELMLSAPI 704


>emb|CAN72853.1| hypothetical protein VITISV_013944 [Vitis vinifera]
          Length = 814

 Score =  347 bits (889), Expect = 4e-93
 Identities = 181/312 (58%), Positives = 233/312 (74%), Gaps = 2/312 (0%)
 Frame = -2

Query: 1032 QAYKFLGVCCGNASRVSGSDTQRVLFQSESLKSLTNASMMERDDPEIIFNLGLENAVQRN 853
            + +KFLG+C GNA+R    D++RV  Q++SL SL  AS++   DPE+IF+L LENA+   
Sbjct: 519  ETHKFLGICYGNAARACVLDSERVALQTDSLNSLNQASLIGHKDPELIFSLALENAIW-- 576

Query: 852  LNAALRYVRTYLKLMGGSSLNGWKLLSLVLSAEERFEDAETIVDLALDEAGIRDELELLR 673
                            G    GWKLL+LV+SAE+RF+DAETIVDLALDEAG  D+LELLR
Sbjct: 577  --------------WPGVPGRGWKLLALVVSAEQRFKDAETIVDLALDEAGRIDQLELLR 622

Query: 672  LKAVLQIAQEQPKNAIETFRVLLSLIHTHKEIGPK--NPEVQSKSDLEMKAWQDLSNVYT 499
            LKAVLQIAQEQPK AIET+R+LL+LI   +E+     + EV ++ +LE + WQDL+N+YT
Sbjct: 623  LKAVLQIAQEQPKQAIETYRILLALIQAQREVQANKFHSEVSAERNLETQTWQDLANIYT 682

Query: 498  RLGSWSDAGICVEKAKSIRHCSADSWHQTGLLFVAQTLYKKALVAFSISLSIEPDHAPSM 319
            +LG WSDA IC++KAKSI   S+ SWH+TG+   AQ+LYK+ALV+FS+SLSIEPD+ PS+
Sbjct: 683  KLGLWSDAEICLDKAKSIEFYSSRSWHKTGISLEAQSLYKEALVSFSVSLSIEPDYVPSI 742

Query: 318  VSTAAILRKFGKNSLPIAKSFLMNAVRLQPTNDEAWLNLGLISKMEGSIXXXXXXXXXAY 139
            VSTA +L KFGK SLPIA+SFLMNA+RL+PTN EAWLNLGL+SKMEGS+         AY
Sbjct: 743  VSTAEVLMKFGKPSLPIARSFLMNALRLEPTNHEAWLNLGLVSKMEGSLQQAADYFQAAY 802

Query: 138  ELKQSAPVLNYL 103
            ELK SAP+ +++
Sbjct: 803  ELKLSAPIQSFV 814


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