BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00004617
         (983 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002531340.1| Frataxin, mitochondrial precursor, putative ...   231   2e-58
ref|XP_002277091.1| PREDICTED: frataxin, mitochondrial isoform 1...   231   2e-58
emb|CAN67530.1| hypothetical protein VITISV_004311 [Vitis vinifera]   231   2e-58
ref|XP_002319394.1| predicted protein [Populus trichocarpa] gi|2...   223   4e-56
ref|XP_003554058.1| PREDICTED: frataxin, mitochondrial-like [Gly...   218   2e-54

>ref|XP_002531340.1| Frataxin, mitochondrial precursor, putative [Ricinus communis]
           gi|223529062|gb|EEF31047.1| Frataxin, mitochondrial
           precursor, putative [Ricinus communis]
          Length = 200

 Score =  231 bits (590), Expect = 2e-58
 Identities = 109/140 (77%), Positives = 128/140 (91%), Gaps = 1/140 (0%)
 Frame = -1

Query: 578 TSRVSFCSRPLNLD-EAEVPASIDYRSLLEEDEYHKLADSTIHDLQEKFEEYGDCSQVDG 402
           +S   FCSRPLNLD  ++ PA+IDY SLL+EDE+HKLADSTIHDLQEKFEEYGD  Q+DG
Sbjct: 61  SSSRDFCSRPLNLDAHSQGPATIDYSSLLQEDEFHKLADSTIHDLQEKFEEYGDGVQIDG 120

Query: 401 FDIDYGNQVLTLKLGNLGTFVLNKQTPNRQLWLSSPVSGPSRFDWDKSSQAWVYRRTKAN 222
           FDIDYGN+VLTLKLG+LGT+VLNKQTPNRQLWLSSPVSGPSR+DWD++++AWVYRRTKAN
Sbjct: 121 FDIDYGNEVLTLKLGDLGTYVLNKQTPNRQLWLSSPVSGPSRYDWDRNAEAWVYRRTKAN 180

Query: 221 LLWLLESEVEQLCGEPISLS 162
           L  +LESE+EQ+CGEPI L+
Sbjct: 181 LFEVLESELEQVCGEPIKLA 200


>ref|XP_002277091.1| PREDICTED: frataxin, mitochondrial isoform 1 [Vitis vinifera]
           gi|296081250|emb|CBI17994.3| unnamed protein product
           [Vitis vinifera]
          Length = 197

 Score =  231 bits (590), Expect = 2e-58
 Identities = 112/142 (78%), Positives = 130/142 (91%), Gaps = 1/142 (0%)
 Frame = -1

Query: 584 TITSRVSFCSRPLNL-DEAEVPASIDYRSLLEEDEYHKLADSTIHDLQEKFEEYGDCSQV 408
           ++ SR SFCSR L+L D+++ PA+IDY SLL+EDE+HK+ADSTI DLQEKFEEYGDC Q+
Sbjct: 57  SVASR-SFCSRTLDLEDDSQGPAAIDYSSLLQEDEFHKVADSTIQDLQEKFEEYGDCVQI 115

Query: 407 DGFDIDYGNQVLTLKLGNLGTFVLNKQTPNRQLWLSSPVSGPSRFDWDKSSQAWVYRRTK 228
           DGFDIDYGNQVLTLKLG LGT+VLNKQTPNRQ+WLSSPVSGPSRFDWD+S+QAWVYRRTK
Sbjct: 116 DGFDIDYGNQVLTLKLGTLGTYVLNKQTPNRQIWLSSPVSGPSRFDWDQSAQAWVYRRTK 175

Query: 227 ANLLWLLESEVEQLCGEPISLS 162
           ANL  LLE+E+E+LCG PISLS
Sbjct: 176 ANLSKLLETELEKLCGTPISLS 197


>emb|CAN67530.1| hypothetical protein VITISV_004311 [Vitis vinifera]
          Length = 202

 Score =  231 bits (590), Expect = 2e-58
 Identities = 112/142 (78%), Positives = 130/142 (91%), Gaps = 1/142 (0%)
 Frame = -1

Query: 584 TITSRVSFCSRPLNL-DEAEVPASIDYRSLLEEDEYHKLADSTIHDLQEKFEEYGDCSQV 408
           ++ SR SFCSR L+L D+++ PA+IDY SLL+EDE+HK+ADSTI DLQEKFEEYGDC Q+
Sbjct: 62  SVASR-SFCSRTLDLEDDSQGPAAIDYSSLLQEDEFHKVADSTIQDLQEKFEEYGDCVQI 120

Query: 407 DGFDIDYGNQVLTLKLGNLGTFVLNKQTPNRQLWLSSPVSGPSRFDWDKSSQAWVYRRTK 228
           DGFDIDYGNQVLTLKLG LGT+VLNKQTPNRQ+WLSSPVSGPSRFDWD+S+QAWVYRRTK
Sbjct: 121 DGFDIDYGNQVLTLKLGTLGTYVLNKQTPNRQIWLSSPVSGPSRFDWDQSAQAWVYRRTK 180

Query: 227 ANLLWLLESEVEQLCGEPISLS 162
           ANL  LLE+E+E+LCG PISLS
Sbjct: 181 ANLSKLLETELEKLCGTPISLS 202


>ref|XP_002319394.1| predicted protein [Populus trichocarpa] gi|222857770|gb|EEE95317.1|
           predicted protein [Populus trichocarpa]
          Length = 192

 Score =  223 bits (569), Expect = 4e-56
 Identities = 112/149 (75%), Positives = 126/149 (84%), Gaps = 2/149 (1%)
 Frame = -1

Query: 602 HSFFSSTITSRVSFCSRPLNLD--EAEVPASIDYRSLLEEDEYHKLADSTIHDLQEKFEE 429
           HS   S   SR  + S  LNL+  + E PA+IDYRSLL+EDE+H LADSTIHDLQEKFEE
Sbjct: 44  HSSSHSPPLSRTFYSSPLLNLNSTDTEGPAAIDYRSLLQEDEFHSLADSTIHDLQEKFEE 103

Query: 428 YGDCSQVDGFDIDYGNQVLTLKLGNLGTFVLNKQTPNRQLWLSSPVSGPSRFDWDKSSQA 249
           YGD  Q+DGFDIDYGN+VLTLKLG+LGT+VLNKQTPNRQLWLSSPVSGPSRFDWD+S QA
Sbjct: 104 YGDSVQIDGFDIDYGNEVLTLKLGDLGTYVLNKQTPNRQLWLSSPVSGPSRFDWDRSDQA 163

Query: 248 WVYRRTKANLLWLLESEVEQLCGEPISLS 162
           WVYRRTKANLL +LESE+ QL GEPI L+
Sbjct: 164 WVYRRTKANLLNVLESEMGQLFGEPIKLA 192


>ref|XP_003554058.1| PREDICTED: frataxin, mitochondrial-like [Glycine max]
          Length = 191

 Score =  218 bits (555), Expect = 2e-54
 Identities = 101/148 (68%), Positives = 122/148 (82%)
 Frame = -1

Query: 605 EHSFFSSTITSRVSFCSRPLNLDEAEVPASIDYRSLLEEDEYHKLADSTIHDLQEKFEEY 426
           E++      +S  +FCSR  NLDE++ P +IDY SLL+E E+H+LADSTIH LQEK E+Y
Sbjct: 44  ENALLPPLSSSSRNFCSRSFNLDESQGPLTIDYSSLLQEGEFHRLADSTIHSLQEKLEDY 103

Query: 425 GDCSQVDGFDIDYGNQVLTLKLGNLGTFVLNKQTPNRQLWLSSPVSGPSRFDWDKSSQAW 246
           GD  +VDGFDIDYGN VLT+KLG+LGT+VLNKQTPNRQLWLSSPVSGPSRFDWD+ ++AW
Sbjct: 104 GDSVEVDGFDIDYGNDVLTIKLGDLGTYVLNKQTPNRQLWLSSPVSGPSRFDWDRDTKAW 163

Query: 245 VYRRTKANLLWLLESEVEQLCGEPISLS 162
           +YRR KANL  +LE E EQLCG+PI LS
Sbjct: 164 IYRRNKANLYKILEGEFEQLCGKPIDLS 191