BLASTX nr result

ID: Coptis25_contig00004616 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00004616
         (976 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273909.1| PREDICTED: U-box domain-containing protein 4...   357   2e-96
ref|XP_002305204.1| predicted protein [Populus trichocarpa] gi|2...   349   5e-94
ref|XP_002302956.1| predicted protein [Populus trichocarpa] gi|2...   346   6e-93
ref|XP_003552957.1| PREDICTED: U-box domain-containing protein 4...   343   4e-92
ref|XP_003538403.1| PREDICTED: U-box domain-containing protein 4...   340   4e-91

>ref|XP_002273909.1| PREDICTED: U-box domain-containing protein 4 [Vitis vinifera]
           gi|147807233|emb|CAN61950.1| hypothetical protein
           VITISV_002189 [Vitis vinifera]
          Length = 378

 Score =  357 bits (917), Expect = 2e-96
 Identities = 185/271 (68%), Positives = 216/271 (79%)
 Frame = +2

Query: 2   NKIKIIDAGALEPLISLLWSGNSNLREYXXXXXXXXXXXXVNKPTITASGAIPLLVEVLR 181
           NK+ I+ +GALEP+IS L S NSN++EY            +NKPTI+A+GAIPLLVE+LR
Sbjct: 96  NKVNIVASGALEPIISFLQSQNSNMQEYATASLLTLSASTINKPTISAAGAIPLLVEILR 155

Query: 182 DGSPQAKIDALMTLYNLSTHRENLSIILSAGAIHPIVNLLRSCKKSSKTAEKCTALLESL 361
            GSPQA++DA++ LYNLST+ +N+SIIL A  I  IV+LL++CKKSSKT EKC+AL+ESL
Sbjct: 156 HGSPQARVDAVLALYNLSTYSDNISIILEAKPIPSIVDLLKTCKKSSKTTEKCSALIESL 215

Query: 362 LGFDEGRNALTXXXXXXXXXXXXXXNGSLQSREHAVGALLTMCESDRSRYREPILKEGVI 541
           + FDEGR ALT              NGSLQSREHAVGALLTMC+SDR +YREPIL+EGVI
Sbjct: 216 VAFDEGRTALTSEEGGVLAVVEVLENGSLQSREHAVGALLTMCQSDRCKYREPILREGVI 275

Query: 542 PGLLELTVQGMPKSQSKAHTLLRLLRDSPYPRSELQADTLENIVYNIVSQIDGEDPGGKA 721
           PGLLELTVQG PKSQSKA TLLRLLRDSP+PRSELQ DTLENIV N++SQID ED   KA
Sbjct: 276 PGLLELTVQGTPKSQSKAQTLLRLLRDSPHPRSELQPDTLENIVCNLISQIDSEDQSRKA 335

Query: 722 KKMLADMVQVSMEQSSRQLQQRTLVYTPTDL 814
           KKMLA+MVQVSMEQS R LQQR +V TPTDL
Sbjct: 336 KKMLAEMVQVSMEQSLRHLQQRAVVCTPTDL 366


>ref|XP_002305204.1| predicted protein [Populus trichocarpa] gi|222848168|gb|EEE85715.1|
           predicted protein [Populus trichocarpa]
          Length = 389

 Score =  349 bits (896), Expect = 5e-94
 Identities = 185/269 (68%), Positives = 210/269 (78%)
 Frame = +2

Query: 2   NKIKIIDAGALEPLISLLWSGNSNLREYXXXXXXXXXXXXVNKPTITASGAIPLLVEVLR 181
           NKI I++AGALE +IS L S NS L+EY            +NKP I+A GAIPLLVE+LR
Sbjct: 105 NKISIVEAGALESIISFLQSQNSILQEYATASLLTLSASTINKPVISACGAIPLLVEILR 164

Query: 182 DGSPQAKIDALMTLYNLSTHRENLSIILSAGAIHPIVNLLRSCKKSSKTAEKCTALLESL 361
           +G  QAK+DA+M L NLSTH +NL IIL    I  IV+LL++CKKSSKTAEKC AL+ESL
Sbjct: 165 NGITQAKVDAVMALSNLSTHSDNLDIILKTNPIPSIVSLLKTCKKSSKTAEKCCALIESL 224

Query: 362 LGFDEGRNALTXXXXXXXXXXXXXXNGSLQSREHAVGALLTMCESDRSRYREPILKEGVI 541
           +GFDEGR ALT              NGSLQSREHAVGALLT+C+SDR +YREPIL+EGVI
Sbjct: 225 VGFDEGRIALTSEEGGILAVIEVLENGSLQSREHAVGALLTLCQSDRCKYREPILREGVI 284

Query: 542 PGLLELTVQGMPKSQSKAHTLLRLLRDSPYPRSELQADTLENIVYNIVSQIDGEDPGGKA 721
           PGLLELTVQG PKSQSKA TLLRLLRD+PYPRSELQ DTLENIV NI+SQIDG++  GKA
Sbjct: 285 PGLLELTVQGTPKSQSKAQTLLRLLRDTPYPRSELQPDTLENIVCNIISQIDGDEQSGKA 344

Query: 722 KKMLADMVQVSMEQSSRQLQQRTLVYTPT 808
           KKMLA+MVQVSMEQS R LQQR LV TPT
Sbjct: 345 KKMLAEMVQVSMEQSLRHLQQRALVCTPT 373


>ref|XP_002302956.1| predicted protein [Populus trichocarpa] gi|222844682|gb|EEE82229.1|
           predicted protein [Populus trichocarpa]
          Length = 379

 Score =  346 bits (887), Expect = 6e-93
 Identities = 183/269 (68%), Positives = 210/269 (78%)
 Frame = +2

Query: 2   NKIKIIDAGALEPLISLLWSGNSNLREYXXXXXXXXXXXXVNKPTITASGAIPLLVEVLR 181
           NKI I++AGALEP+IS L S NS LRE             +NK  I+A+GAIPLLV++LR
Sbjct: 109 NKISIVEAGALEPIISFLKSQNSILRECATASLLTLSASSINKQVISATGAIPLLVDILR 168

Query: 182 DGSPQAKIDALMTLYNLSTHRENLSIILSAGAIHPIVNLLRSCKKSSKTAEKCTALLESL 361
           +G+ QAK+DA+M L NLSTH  NL IIL    I  IV+LL++CKKSSKTAEKC AL+ESL
Sbjct: 169 NGNTQAKVDAVMALSNLSTHSNNLDIILKTNPIPSIVSLLKTCKKSSKTAEKCCALIESL 228

Query: 362 LGFDEGRNALTXXXXXXXXXXXXXXNGSLQSREHAVGALLTMCESDRSRYREPILKEGVI 541
           +GF EGR ALT              NGSLQSREHAVGALLT+C+SDR +YREPIL+EGVI
Sbjct: 229 VGFHEGRTALTSEEGGILAVVEVLENGSLQSREHAVGALLTLCQSDRFKYREPILREGVI 288

Query: 542 PGLLELTVQGMPKSQSKAHTLLRLLRDSPYPRSELQADTLENIVYNIVSQIDGEDPGGKA 721
           PGLLELTVQG PKSQSKAHTLL LLRD+PYPRSELQ DTLENIV NI+SQIDG++  GKA
Sbjct: 289 PGLLELTVQGTPKSQSKAHTLLCLLRDAPYPRSELQPDTLENIVCNIISQIDGDEQSGKA 348

Query: 722 KKMLADMVQVSMEQSSRQLQQRTLVYTPT 808
           KKMLA+MVQVSMEQS +QLQQR LV TPT
Sbjct: 349 KKMLAEMVQVSMEQSLKQLQQRALVCTPT 377


>ref|XP_003552957.1| PREDICTED: U-box domain-containing protein 4-like [Glycine max]
          Length = 384

 Score =  343 bits (880), Expect = 4e-92
 Identities = 182/271 (67%), Positives = 209/271 (77%)
 Frame = +2

Query: 2   NKIKIIDAGALEPLISLLWSGNSNLREYXXXXXXXXXXXXVNKPTITASGAIPLLVEVLR 181
           NKI I++AGALEP+IS L S N NL+E              NKP I+A G IPLLV++LR
Sbjct: 101 NKINIVEAGALEPIISFLKSQNLNLQESATASLLTLSASSTNKPIISACGVIPLLVQILR 160

Query: 182 DGSPQAKIDALMTLYNLSTHRENLSIILSAGAIHPIVNLLRSCKKSSKTAEKCTALLESL 361
           DGS QAK DA+M L NLSTH  NLSIIL    I  +V+LL++CKKSSKTAEKC AL+ESL
Sbjct: 161 DGSHQAKADAVMALSNLSTHTNNLSIILETNPIPYMVDLLKTCKKSSKTAEKCCALIESL 220

Query: 362 LGFDEGRNALTXXXXXXXXXXXXXXNGSLQSREHAVGALLTMCESDRSRYREPILKEGVI 541
           + +DEGR ALT              +G+LQSREHAVGALLTMC+SDR +YREPIL+EGVI
Sbjct: 221 VDYDEGRTALTSEEGGVLAVVEVLESGTLQSREHAVGALLTMCQSDRCKYREPILREGVI 280

Query: 542 PGLLELTVQGMPKSQSKAHTLLRLLRDSPYPRSELQADTLENIVYNIVSQIDGEDPGGKA 721
           PGLLELTVQG PKSQSKA TLL+LLR+SPYPRSE+Q DTLENIV NI+SQIDG+D  GKA
Sbjct: 281 PGLLELTVQGTPKSQSKARTLLQLLRESPYPRSEIQPDTLENIVCNIISQIDGDDQSGKA 340

Query: 722 KKMLADMVQVSMEQSSRQLQQRTLVYTPTDL 814
           KKMLA+MVQVSMEQS R LQQR LV TP+DL
Sbjct: 341 KKMLAEMVQVSMEQSLRHLQQRALVCTPSDL 371


>ref|XP_003538403.1| PREDICTED: U-box domain-containing protein 4-like [Glycine max]
          Length = 392

 Score =  340 bits (871), Expect = 4e-91
 Identities = 181/271 (66%), Positives = 209/271 (77%)
 Frame = +2

Query: 2   NKIKIIDAGALEPLISLLWSGNSNLREYXXXXXXXXXXXXVNKPTITASGAIPLLVEVLR 181
           NKI I++AGALEP+IS L S N NL+E              NKP I+A GAIPLLV++LR
Sbjct: 109 NKINIVEAGALEPIISFLKSQNLNLQESATASLLTLSASSTNKPIISACGAIPLLVKILR 168

Query: 182 DGSPQAKIDALMTLYNLSTHRENLSIILSAGAIHPIVNLLRSCKKSSKTAEKCTALLESL 361
           DGSPQAK +A+M L NLSTH  NL IIL    I  IV+LL++CKKSSKTAEKC AL+ESL
Sbjct: 169 DGSPQAKAEAVMALSNLSTHPNNLRIILKTNPIPFIVDLLKTCKKSSKTAEKCCALIESL 228

Query: 362 LGFDEGRNALTXXXXXXXXXXXXXXNGSLQSREHAVGALLTMCESDRSRYREPILKEGVI 541
           + +DEGR ALT               G+LQSREHAVGALLTMC+SDR +YREPIL+EGVI
Sbjct: 229 VDYDEGRTALTSEEGGVLAVVEVLEIGTLQSREHAVGALLTMCQSDRCKYREPILREGVI 288

Query: 542 PGLLELTVQGMPKSQSKAHTLLRLLRDSPYPRSELQADTLENIVYNIVSQIDGEDPGGKA 721
           PGLLELTVQG PKSQSKA +LL+LLR+SPYPRSE+Q DTLENIV +I+SQIDG+D  GKA
Sbjct: 289 PGLLELTVQGTPKSQSKARSLLQLLRESPYPRSEIQPDTLENIVCSIISQIDGDDQSGKA 348

Query: 722 KKMLADMVQVSMEQSSRQLQQRTLVYTPTDL 814
           KKMLA+MVQVSMEQS R LQQR LV TP+DL
Sbjct: 349 KKMLAEMVQVSMEQSLRHLQQRALVCTPSDL 379


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